Re: [galaxy-dev] 'Boolean' parameter type misbehaves in tool tests if truevalue starts with hyphen?

2015-05-08 Thread Peter Briggs
@manchester.ac.uk Bioinformatics Core Facility University of Manchester B.1083 Michael Smith Bldg Tel: (0161) 2751482 From: Peter Cock [p.j.a.c...@googlemail.com] Sent: Friday, May 08, 2015 3:16 PM To: Peter Briggs Cc: galaxy-dev@lists.galaxyproject.org Subject:

Re: [galaxy-dev] 'Boolean' parameter type misbehaves in tool tests if truevalue starts with hyphen?

2015-05-08 Thread John Chilton
I am with Peter that the best thing to do is probably to specify "true" or "false". We just had a similar report from Bjoern though - the thinking being that this was probably allowed in the past (using the truevalue/falsevalue) but Galaxy lost that functionality - https://trello.com/c/iGk3f1pE. h

Re: [galaxy-dev] 'Boolean' parameter type misbehaves in tool tests if truevalue starts with hyphen?

2015-05-08 Thread Peter Cock
On Fri, May 8, 2015 at 3:05 PM, Peter Briggs wrote: > Hello > > I'm currently writing tests for a tool and think I've found a situation where > the behaviour of the boolean parameter type does not seem correct within the > test environment. > > The tool defines the following boolean parameter: >

[galaxy-dev] 'Boolean' parameter type misbehaves in tool tests if truevalue starts with hyphen?

2015-05-08 Thread Peter Briggs
Hello I'm currently writing tests for a tool and think I've found a situation where the behaviour of the boolean parameter type does not seem correct within the test environment. The tool defines the following boolean parameter: and accesses its value in the tag using: -B $spmr i.e. if