Re: [galaxy-user] Regarding a cuffdiff output

2013-04-19 Thread Jennifer Hillman-Jackson
Department of Genetics Rutgers University - New Brunswick Campus -- Jennifer Hillman-Jackson Galaxy Support and Training http://galaxyproject.org ___ The Galaxy User list should be used for the discussion of Galaxy analysis and other features

Re: [galaxy-user] bwa and bowtie not working

2013-01-24 Thread Jennifer Hillman-Jackson
://lists.bx.psu.edu/ -- Jennifer Hillman-Jackson Galaxy Support and Training http://galaxyproject.org ___ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all

Re: [galaxy-user] bed file error

2013-01-24 Thread Jennifer Hillman-Jackson
the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ -- Jennifer Hillman-Jackson Galaxy Support and Training http://galaxyproject.org

Re: [galaxy-user] Runtime data?

2013-01-23 Thread Jennifer Hillman-Jackson
/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ -- Jennifer Hillman-Jackson Galaxy Support and Training http://galaxyproject.org ___ The Galaxy User

Re: [galaxy-user] Search software on public Galaxy servers

2013-01-23 Thread Jennifer Hillman-Jackson
of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ -- Jennifer Hillman-Jackson Galaxy

Re: [galaxy-user] joining two FASTq files with overlap reads

2013-01-09 Thread Jennifer Hillman-Jackson
subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ -- Jennifer Hillman-Jackson Galaxy Support and Training http://galaxyproject.org ___ The Galaxy User list should be used

Re: [galaxy-user] Remove unpaired reads from quality-filtered pared-end fastq files.

2013-01-09 Thread Jennifer Hillman-Jackson
/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ -- Jennifer Hillman-Jackson Galaxy Support and Training http://galaxyproject.org ___ The Galaxy User list

Re: [galaxy-user] Download data using FTP-access?

2013-01-09 Thread Jennifer Hillman-Jackson
the commando: ’C:\ curl https://xxx’ in commando promt, I get the following message: ’Protocol https not supported or disabled in libcurl’. How do I make Curl download from https? Karen Fra: Jennifer Hillman-Jackson [j...@bx.psu.edu] Sendt: 8

Re: [galaxy-user] Download data using FTP-access?

2013-01-08 Thread Jennifer Hillman-Jackson
, please use the interface at: http://lists.bx.psu.edu/ -- Jennifer Hillman-Jackson Galaxy Support and Training http://galaxyproject.org ___ The Galaxy User list should be used for the discussion of Galaxy analysis and other features

Re: [galaxy-user] (no subject)

2013-01-07 Thread Jennifer Hillman-Jackson
. Contacting your local system administrator for help is one place to start. Anyone who did click on the link already should do the same, as this is usually how such viruses spread, although much depends on OS and other factors. Good luck! Jen Galaxy team -- Jennifer Hillman-Jackson Galaxy Support

[galaxy-user] Trackster custom builds wrong

2013-01-07 Thread Jennifer Hillman-Jackson
Repost to Galaxy-user --- When using Trackster on Galaxy( https://main.g2.bx.psu.edu/root ), as the Galaxy Wiki of Trackster (http://wiki.galaxyproject.org/Learn/Visualization) recommend , I need to build a track browsers for soybean because that it isn't installed for all users. But

Re: [galaxy-user] gene names from cuffdiff data

2013-01-07 Thread Jennifer Hillman-Jackson
Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ -- Jennifer Hillman-Jackson Galaxy Support and Training http://galaxyproject.org

Re: [galaxy-user] identify different number of differential expressed genes using ensemble or reseq GTF

2013-01-07 Thread Jennifer Hillman-Jackson
at: http://lists.bx.psu.edu/ -- Jennifer Hillman-Jackson Galaxy Support and Training http://galaxyproject.org ___ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server