Hello,
I am using the Cistrome/Galaxy for the ChIP-seq analysis. Recently i am
encountering two problems, first is with the Genomic interval operation where i
am not able to intersect or subtract the bed files.
Second is with the Seqpos motif tool. The Seqpos analysis runs fine, however
when i
Hello all,
The January 2013 Galaxy Update is now
availablehttp://wiki.galaxyproject.org/GalaxyUpdates/2013_01.
*Highlights:*
-
New papershttp://wiki.galaxyproject.org/GalaxyUpdates/2013_01#New_Papers
-
Open
To be clear, your admin user still works on this instance but another one does
not? If this is the case, can you log in as the admin user (and, if not,
simply register a new user and make it an admin) and take a look at the user
list in the admin panel?
To get to the user list when in Galaxy,
Thank you for the reply.
When I check admin from cloudman interface, I still see myself as admin user.
However, when I went to galaxy web to continue my work, I couldn't login( as
error message below). I can re-register with the same user name/email, however,
my history is empty. I already had
On Jan 2, 2013, at 5:17 PM, Sun, Wenping [USA] sun_wenp...@bah.com wrote:
1. how to retain my previous work?
If you were logged in when you were working previously, we just have to figure
out who you were logged in as, and log back in. You may also want to check
Saved Histories to make sure
Hi Ross,
I think I need to clarify. I have a file in
/home/galaxy/data-test/dir1/dir2/somefile.txt
Under the Upload files from filesystem paths, In the path to upload window
I paste /home/galaxy/data-test. This then puts the somefile.txt in the
Neil,
It would help if you could point to an existing tool that works the way you
want. I don't know of any that deal with arbitrary nested directories
containing arbitrary files. A new composite datatype could impose a
structure that a tool could be written to deal with (eg the pbed datatype
used
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