Hi HCP-users list,
I'm having trouble using the metric gradient command.
Using workbench:
wb_command -metric-gradient 1.L.inflated.164k_fs_LR.surf.gii
1.L.thickness.164k_fs_LR.shape.gii
1.L.thicknessgradient.164k_fs_LR.shape.gii
Or Caret:
caret_command -metric-gradient
You might try making sure you have the latest version of the GIFTI matlab toolbox (http://www.artefact.tk/software/matlab/gifti/) and of Connectome Workbench.
Peace,
Matt.
From: 木村一皓 ikko1001...@gmail.com
Date: Friday, October 17, 2014 at 12:52 AM
To: Matt Glasser
You should not be using the inflated surface (rather the midthickness
surface would be more appropriate). It is possible that the command does
not work correctly without a little pre-smoothing but Tim will need to
comment on that.
Peace,
Matt.
On 10/17/14, 5:29 AM, K. Wagstyl kw...@cam.ac.uk
Thanks Matt,
Now it went fine with the data of CM!! Thanks so much for your help!
Best,
Ikko
2014-10-17 21:08 GMT+09:00 Glasser, Matthew glass...@wusm.wustl.edu:
You might try making sure you have the latest version of the GIFTI
matlab toolbox
Hi HCP folks,
I had a similar issue with 7T data collected locally but preprocessed via
the HCP pipeline - assuming FSL doesn¹t release a fix, you might want to
include a warning about this when the HCP 7T data is released. Will
probably be disconcerting for your Mac users.
Best,
-Ely
Icahn
