colored reference numbers in citations

2015-05-25 Thread Michael Berger

Dear Lyx friends,
I am writing a KOMA-Script Article with citations inserted from a BibTeX 
generated Bibliography.


The citations appear in PDF as: Kröger [9, 1998] in black.

But I need the reference numbers to appear in a distinct green color 
like this: Kröger [9, 1998].

(for the 9 in my example #33cc00 is used)

How could this be accomplished?
Thanks

Michael Berger



Michael Berger, Dipl. Ing.
Im Borngrund 7a
D-35606 Solms
id...@online.de
Fon: +49 6442 706509
Fax: 032121247536
Linux member





Re: Possessive author names in citations

2015-02-26 Thread Christopher Menzel
Just curious: Under what sort of scenario would this be useful? I'm 
asking because LyX allows you to cite individual references by date 
only. Hence, you can write Knuth's by hand and add the bib reference 
without the author name so that only (1984) prints. If that's all 
you're after, it seems to deliver what you want without requiring you to 
mess with layouts or use ERT.


-chris


Marsh mailto:ma...@uri.edu
February 25, 2015 at 4:41 PM
The web page below shows how to modify standard BibLaTeX
to allow possessive author names in citations (use all three lines in 
the URL) :


https://tex.stackexchange.com/
questions/22273/
author-name-of-textcite-as-possessive

For example, suppose a bib file has the following entry:

@book{knuth,
author = {Donald E. Knuth},
title = {The {{\TeX}book}},
publisher = {Addison-Wesley},
date = {1984}
}

Ordinary usage might include \textcite{knuth}.

The line above would look like:

Ordinary usage might include Knuth (1984).


But with the code shown on the web page, the following would hold.

Modified usage might include \posscite{knuth}.

This would appear as:

Ordinary usage might include Knuth's (1984).

OK. I can get this to work in plain LaTeX and perhaps in LyX by using ERT.
But how can I add the possessive style as a Citation style in
LyX's Citation dialog window for citations so that all citations
can be done though the same interface and without ERT?



Re: Possessive author names in citations

2015-02-26 Thread Richard Heck

On 02/25/2015 05:41 PM, Marsh wrote:

The web page below shows how to modify standard BibLaTeX
to allow possessive author names in citations (use all three lines in the URL) :

https://tex.stackexchange.com/
   questions/22273/
   author-name-of-textcite-as-possessive

For example, suppose a bib file has the following entry:

@book{knuth,
 author  = {Donald E. Knuth},
 title   = {The {{\TeX}book}},
 publisher   = {Addison-Wesley},
 date= {1984}
 }

Ordinary usage might include \textcite{knuth}.

The line above would look like:

Ordinary usage might include Knuth (1984).


But with the code shown on the web page, the following would hold.

Modified usage might include \posscite{knuth}.

This would appear as:

Ordinary usage might include Knuth's (1984).

OK. I can get this to work in plain LaTeX and perhaps in LyX by using ERT.
But how can I add the possessive style as a Citation style in
LyX's Citation dialog window for citations so that all citations
can be done though the same interface and without ERT?


To be honest, I am not absolutely sure if this is possible, but it might 
be. I should add that I am not familiar with now biblatex is used in 
LyX. I will therefore assume that, within LyX, it looks as if you are 
using the natbib citation engine.


The citation commands that LyX accepts are defined in the file 
natbib.module, which LyX loads automatically when natbib is chosen. I 
believe you can modify this file in the usual way: copy it to you local 
layouts directory (e.g., ~/.lyx/layouts/) and do with it what you will. 
The syntax of the file is not as terrible as it looks. You will need to 
add posscite as a possible command to the CiteEngine authoryear section, 
indicating whether it takes optional arguments and if so how many. You 
will then need to add a macro for it to the authoryear CiteFormat 
section. That's where a little figuring out will be required, but ask 
again if you need help.


Richard



Re: Possessive author names in citations

2015-02-26 Thread Richard Heck

On 02/25/2015 05:41 PM, Marsh wrote:

The web page below shows how to modify standard BibLaTeX
to allow possessive author names in citations (use all three lines in the URL) :

https://tex.stackexchange.com/
   questions/22273/
   author-name-of-textcite-as-possessive

For example, suppose a bib file has the following entry:

@book{knuth,
 author  = {Donald E. Knuth},
 title   = {The {{\TeX}book}},
 publisher   = {Addison-Wesley},
 date= {1984}
 }

Ordinary usage might include \textcite{knuth}.

The line above would look like:

Ordinary usage might include Knuth (1984).


But with the code shown on the web page, the following would hold.

Modified usage might include \posscite{knuth}.

This would appear as:

Ordinary usage might include Knuth's (1984).

OK. I can get this to work in plain LaTeX and perhaps in LyX by using ERT.
But how can I add the possessive style as a Citation style in
LyX's Citation dialog window for citations so that all citations
can be done though the same interface and without ERT?


To be honest, I am not absolutely sure if this is possible, but it might 
be. I should add that I am not familiar with now biblatex is used in 
LyX. I will therefore assume that, within LyX, it looks as if you are 
using the natbib citation engine.


The citation commands that LyX accepts are defined in the file 
natbib.module, which LyX loads automatically when natbib is chosen. I 
believe you can modify this file in the usual way: copy it to you local 
layouts directory (e.g., ~/.lyx/layouts/) and do with it what you will. 
The syntax of the file is not as terrible as it looks. You will need to 
add posscite as a possible command to the CiteEngine authoryear section, 
indicating whether it takes optional arguments and if so how many. You 
will then need to add a macro for it to the authoryear CiteFormat 
section. That's where a little figuring out will be required, but ask 
again if you need help.


Richard



Re: Possessive author names in citations

2015-02-26 Thread Christopher Menzel
Just curious: Under what sort of scenario would this be useful? I'm 
asking because LyX allows you to cite individual references by date 
only. Hence, you can write Knuth's by hand and add the bib reference 
without the author name so that only (1984) prints. If that's all 
you're after, it seems to deliver what you want without requiring you to 
mess with layouts or use ERT.


-chris


Marsh mailto:ma...@uri.edu
February 25, 2015 at 4:41 PM
The web page below shows how to modify standard BibLaTeX
to allow possessive author names in citations (use all three lines in 
the URL) :


https://tex.stackexchange.com/
questions/22273/
author-name-of-textcite-as-possessive

For example, suppose a bib file has the following entry:

@book{knuth,
author = {Donald E. Knuth},
title = {The {{\TeX}book}},
publisher = {Addison-Wesley},
date = {1984}
}

Ordinary usage might include \textcite{knuth}.

The line above would look like:

Ordinary usage might include Knuth (1984).


But with the code shown on the web page, the following would hold.

Modified usage might include \posscite{knuth}.

This would appear as:

Ordinary usage might include Knuth's (1984).

OK. I can get this to work in plain LaTeX and perhaps in LyX by using ERT.
But how can I add the possessive style as a Citation style in
LyX's Citation dialog window for citations so that all citations
can be done though the same interface and without ERT?



Re: Possessive author names in citations

2015-02-26 Thread Richard Heck

On 02/25/2015 05:41 PM, Marsh wrote:

The web page below shows how to modify standard BibLaTeX
to allow possessive author names in citations (use all three lines in the URL) :

https://tex.stackexchange.com/
   questions/22273/
   author-name-of-textcite-as-possessive

For example, suppose a bib file has the following entry:

@book{knuth,
 author  = {Donald E. Knuth},
 title   = {The {{\TeX}book}},
 publisher   = {Addison-Wesley},
 date= {1984}
 }

Ordinary usage might include \textcite{knuth}.

The line above would look like:

Ordinary usage might include Knuth (1984).


But with the code shown on the web page, the following would hold.

Modified usage might include \posscite{knuth}.

This would appear as:

Ordinary usage might include Knuth's (1984).

OK. I can get this to work in plain LaTeX and perhaps in LyX by using ERT.
But how can I add the possessive style as a Citation style in
LyX's Citation dialog window for citations so that all citations
can be done though the same interface and without ERT?


To be honest, I am not absolutely sure if this is possible, but it might 
be. I should add that I am not familiar with now biblatex is used in 
LyX. I will therefore assume that, within LyX, it looks as if you are 
using the natbib citation engine.


The citation commands that LyX accepts are defined in the file 
natbib.module, which LyX loads automatically when natbib is chosen. I 
believe you can modify this file in the usual way: copy it to you local 
layouts directory (e.g., ~/.lyx/layouts/) and do with it what you will. 
The syntax of the file is not as terrible as it looks. You will need to 
add posscite as a possible command to the CiteEngine authoryear section, 
indicating whether it takes optional arguments and if so how many. You 
will then need to add a macro for it to the authoryear CiteFormat 
section. That's where a little figuring out will be required, but ask 
again if you need help.


Richard



Re: Possessive author names in citations

2015-02-26 Thread Christopher Menzel
Just curious: Under what sort of scenario would this be useful? I'm 
asking because LyX allows you to cite individual references by date 
only. Hence, you can write "Knuth's" by hand and add the bib reference 
without the author name so that only "(1984)" prints. If that's all 
you're after, it seems to deliver what you want without requiring you to 
mess with layouts or use ERT.


-chris


Marsh <mailto:ma...@uri.edu>
February 25, 2015 at 4:41 PM
The web page below shows how to modify standard BibLaTeX
to allow possessive author names in citations (use all three lines in 
the URL) :


https://tex.stackexchange.com/
questions/22273/
author-name-of-textcite-as-possessive

For example, suppose a bib file has the following entry:

@book{knuth,
author = {Donald E. Knuth},
title = {The {{\TeX}book}},
publisher = {Addison-Wesley},
date = {1984}
}

Ordinary usage might include \textcite{knuth}.

The line above would look like:

Ordinary usage might include Knuth (1984).


But with the code shown on the web page, the following would hold.

Modified usage might include \posscite{knuth}.

This would appear as:

Ordinary usage might include Knuth's (1984).

OK. I can get this to work in plain LaTeX and perhaps in LyX by using ERT.
But how can I add the possessive style as a Citation style in
LyX's Citation dialog window for citations so that all citations
can be done though the same interface and without ERT?



Possessive author names in citations

2015-02-25 Thread Marsh
The web page below shows how to modify standard BibLaTeX
to allow possessive author names in citations (use all three lines in the URL) :

https://tex.stackexchange.com/
  questions/22273/
  author-name-of-textcite-as-possessive

For example, suppose a bib file has the following entry:

@book{knuth,
author  = {Donald E. Knuth},
title   = {The {{\TeX}book}},
publisher   = {Addison-Wesley},
date= {1984}
}

Ordinary usage might include \textcite{knuth}.

The line above would look like:

Ordinary usage might include Knuth (1984).


But with the code shown on the web page, the following would hold.

Modified usage might include \posscite{knuth}.

This would appear as:

Ordinary usage might include Knuth's (1984).

OK. I can get this to work in plain LaTeX and perhaps in LyX by using ERT.
But how can I add the possessive style as a Citation style in
LyX's Citation dialog window for citations so that all citations 
can be done though the same interface and without ERT?



Possessive author names in citations

2015-02-25 Thread Marsh
The web page below shows how to modify standard BibLaTeX
to allow possessive author names in citations (use all three lines in the URL) :

https://tex.stackexchange.com/
  questions/22273/
  author-name-of-textcite-as-possessive

For example, suppose a bib file has the following entry:

@book{knuth,
author  = {Donald E. Knuth},
title   = {The {{\TeX}book}},
publisher   = {Addison-Wesley},
date= {1984}
}

Ordinary usage might include \textcite{knuth}.

The line above would look like:

Ordinary usage might include Knuth (1984).


But with the code shown on the web page, the following would hold.

Modified usage might include \posscite{knuth}.

This would appear as:

Ordinary usage might include Knuth's (1984).

OK. I can get this to work in plain LaTeX and perhaps in LyX by using ERT.
But how can I add the possessive style as a Citation style in
LyX's Citation dialog window for citations so that all citations 
can be done though the same interface and without ERT?



Possessive author names in citations

2015-02-25 Thread Marsh
The web page below shows how to modify standard BibLaTeX
to allow possessive author names in citations (use all three lines in the URL) :

https://tex.stackexchange.com/
  questions/22273/
  author-name-of-textcite-as-possessive

For example, suppose a bib file has the following entry:

@book{knuth,
author  = {Donald E. Knuth},
title   = {The {{\TeX}book}},
publisher   = {Addison-Wesley},
date= {1984}
}

Ordinary usage might include \textcite{knuth}.

The line above would look like:

Ordinary usage might include Knuth (1984).


But with the code shown on the web page, the following would hold.

Modified usage might include \posscite{knuth}.

This would appear as:

Ordinary usage might include Knuth's (1984).

OK. I can get this to work in plain LaTeX and perhaps in LyX by using ERT.
But how can I add the possessive style as a Citation style in
LyX's Citation dialog window for citations so that all citations 
can be done though the same interface and without ERT?



Re: Problem with citations : (author?) in front of each citation in text

2014-11-30 Thread Deisy
to solve the problem, lyx menu, go to document, configuration, 
bibliography, and select bibtex as a processor for literature.
And go!



Re: Problem with citations : (author?) in front of each citation in text

2014-11-30 Thread Deisy
to solve the problem, lyx menu, go to document, configuration, 
bibliography, and select bibtex as a processor for literature.
And go!



Re: Problem with citations : (author?) in front of each citation in text

2014-11-30 Thread Deisy
to solve the problem, lyx menu, go to document, configuration, 
bibliography, and select "bibtex" as a processor for literature.
And go!



Change font size of inline citations

2014-08-26 Thread karthikeya
I want the inline citations to appear as font size 'smaller', so that they
don't break the flow of text much. The only way I can do it now is select
each citation, and set the font size individually. Is it possible to make
all inline citations (author year) smaller font by any single switch or
command? It would be nice if it can be done from withing lyx, or


One workaround i could think of is replacing


\citet{bibkey} or \citep{bibkey}


with


{\footnotesize \citet{bibkey}}

using sed, but I am not good at reg exps, especially with so many special
characters.


Change font size of inline citations

2014-08-26 Thread karthikeya
I want the inline citations to appear as font size 'smaller', so that they
don't break the flow of text much. The only way I can do it now is select
each citation, and set the font size individually. Is it possible to make
all inline citations (author year) smaller font by any single switch or
command? It would be nice if it can be done from withing lyx, or


One workaround i could think of is replacing


\citet{bibkey} or \citep{bibkey}


with


{\footnotesize \citet{bibkey}}

using sed, but I am not good at reg exps, especially with so many special
characters.


Change font size of inline citations

2014-08-26 Thread karthikeya
I want the inline citations to appear as font size 'smaller', so that they
don't break the flow of text much. The only way I can do it now is select
each citation, and set the font size individually. Is it possible to make
all inline citations (author year) smaller font by any single switch or
command? It would be nice if it can be done from withing lyx, or


One workaround i could think of is replacing


\citet{bibkey} or \citep{bibkey}


with


{\footnotesize \citet{bibkey}}

using sed, but I am not good at reg exps, especially with so many special
characters.


list of citations and multiple citing

2014-08-22 Thread Wolfgang Engelmann

Hello,
lyx (2.x) allows to combine several citations (e.g. as shown by A,B,C). 
However, in the list of citations (outlinelist of citations) only A is 
shown (unless B and or C are cited somewhere else). It is a bit annoying 
if one checks for a citation which is not cited alone or at the first 
place. Could this be improved?

Wolfgang


Re: list of citations and multiple citing

2014-08-22 Thread Richard Heck

On 08/22/2014 03:41 AM, Wolfgang Engelmann wrote:

Hello,
lyx (2.x) allows to combine several citations (e.g. as shown by 
A,B,C). However, in the list of citations (outlinelist of citations) 
only A is shown (unless B and or C are cited somewhere else). It is a 
bit annoying if one checks for a citation which is not cited alone or 
at the first place. Could this be improved?


I see what you mean. Can you file a bug report about this on trac? It 
would be very easy to change, except that we rely upon the way it is now 
in other parts of the code.


Richard



Re: list of citations and multiple citing

2014-08-22 Thread Wolfgang Engelmann

Hello, Richard,
could you kindly forward and, if necessary, complete this bug report?
Let me know if I forgot something.

Lyx Version 2.1.1
os=unix
effect cosmetic
enhancement request

lyx (2.x) allows to combine several citations
example: as cited by A,B,C
where A,B,C is shown as a combined citation
However, in the list of citations (outlinelist of citations) only A is 
shown

(unless B and/or C are cited somewhere else)
Improvement proposal: show in the list of citations B and C in addition to A
Reason: checking for citations would cover all of them

reported by Wolfgang Engelmann
engelm...@uni-tuebingen.de

thanks

Am 22.08.2014 um 17:18 schrieb Richard Heck:
lyx (2.x) allows to combine several citations (e.g. as shown by 
A,B,C). However, in the list of citations (outlinelist of citations) 
only A is shown (unless B and or C are cited somewhere else). It is a 
bit annoying if one checks for a citation which is not cited alone or 
at the first place. Could this be improved? 




list of citations and multiple citing

2014-08-22 Thread Wolfgang Engelmann

Hello,
lyx (2.x) allows to combine several citations (e.g. as shown by A,B,C). 
However, in the list of citations (outlinelist of citations) only A is 
shown (unless B and or C are cited somewhere else). It is a bit annoying 
if one checks for a citation which is not cited alone or at the first 
place. Could this be improved?

Wolfgang


Re: list of citations and multiple citing

2014-08-22 Thread Richard Heck

On 08/22/2014 03:41 AM, Wolfgang Engelmann wrote:

Hello,
lyx (2.x) allows to combine several citations (e.g. as shown by 
A,B,C). However, in the list of citations (outlinelist of citations) 
only A is shown (unless B and or C are cited somewhere else). It is a 
bit annoying if one checks for a citation which is not cited alone or 
at the first place. Could this be improved?


I see what you mean. Can you file a bug report about this on trac? It 
would be very easy to change, except that we rely upon the way it is now 
in other parts of the code.


Richard



Re: list of citations and multiple citing

2014-08-22 Thread Wolfgang Engelmann

Hello, Richard,
could you kindly forward and, if necessary, complete this bug report?
Let me know if I forgot something.

Lyx Version 2.1.1
os=unix
effect cosmetic
enhancement request

lyx (2.x) allows to combine several citations
example: as cited by A,B,C
where A,B,C is shown as a combined citation
However, in the list of citations (outlinelist of citations) only A is 
shown

(unless B and/or C are cited somewhere else)
Improvement proposal: show in the list of citations B and C in addition to A
Reason: checking for citations would cover all of them

reported by Wolfgang Engelmann
engelm...@uni-tuebingen.de

thanks

Am 22.08.2014 um 17:18 schrieb Richard Heck:
lyx (2.x) allows to combine several citations (e.g. as shown by 
A,B,C). However, in the list of citations (outlinelist of citations) 
only A is shown (unless B and or C are cited somewhere else). It is a 
bit annoying if one checks for a citation which is not cited alone or 
at the first place. Could this be improved? 




list of citations and multiple citing

2014-08-22 Thread Wolfgang Engelmann

Hello,
lyx (2.x) allows to combine several citations (e.g. as shown by A,B,C). 
However, in the list of citations (outline>list of citations) only A is 
shown (unless B and or C are cited somewhere else). It is a bit annoying 
if one checks for a citation which is not cited alone or at the first 
place. Could this be improved?

Wolfgang


Re: list of citations and multiple citing

2014-08-22 Thread Richard Heck

On 08/22/2014 03:41 AM, Wolfgang Engelmann wrote:

Hello,
lyx (2.x) allows to combine several citations (e.g. as shown by 
A,B,C). However, in the list of citations (outline>list of citations) 
only A is shown (unless B and or C are cited somewhere else). It is a 
bit annoying if one checks for a citation which is not cited alone or 
at the first place. Could this be improved?


I see what you mean. Can you file a bug report about this on trac? It 
would be very easy to change, except that we rely upon the way it is now 
in other parts of the code.


Richard



Re: list of citations and multiple citing

2014-08-22 Thread Wolfgang Engelmann

Hello, Richard,
could you kindly forward and, if necessary, complete this bug report?
Let me know if I forgot something.

Lyx Version 2.1.1
os=unix
effect cosmetic
enhancement request

lyx (2.x) allows to combine several citations
example: as cited by A,B,C
where A,B,C is shown as a combined citation
However, in the list of citations (outline>list of citations) only A is 
shown

(unless B and/or C are cited somewhere else)
Improvement proposal: show in the list of citations B and C in addition to A
Reason: checking for citations would cover all of them

reported by Wolfgang Engelmann
engelm...@uni-tuebingen.de

thanks

Am 22.08.2014 um 17:18 schrieb Richard Heck:
lyx (2.x) allows to combine several citations (e.g. as shown by 
A,B,C). However, in the list of citations (outline>list of citations) 
only A is shown (unless B and or C are cited somewhere else). It is a 
bit annoying if one checks for a citation which is not cited alone or 
at the first place. Could this be improved? 




LyX 2.1.0: some issues with citations

2014-05-20 Thread Graeme
On Windows 7 (64 bit) (and Windows XP, 32 bit) I upgraded from LyX 2.0.7 
to 2.1.0 without any obvious problems.


In doing the upgrades, I first uninstalled 2.0.7, but chose the option 
to retain user preferences. Then I installed 2.1.0.


Both operations were carried out using accounts with administrator 
privileges, although I normally use LyX with a standard user account 
that does not have admin privileges.


Mostly LyX 2.1.0 performs smoothly, except that there are several 
aspects of the way it handles citations that are no longer as I expect.


1. With LyX 2.0.7, my default bib-file processor was set to BibTeX8, yet 
when I used LyX 2.1.0 I found that it had defaulted back to plain BibTeX.


It seems that none of the preferences stored in the file
userprofile\Application Data\LyX2.0\preferences
migrate automatically to the file
userprofile\Application Data\LyX2.1\preferences

Of course this problem was easily fixed, but I wondered whether this was 
intended behaviour, or if it is a bug in the Windows Installer (file 
LyX-2.1.0-Installer-2.exe)?




2. A more annoying issue is when you open a file that contains citations 
that use multiple BibTeX keys as the argument to single \cite command


Within the LyX file there are numerous instances of citations with LyX 
code similar to this:

\begin_inset CommandInset citation
LatexCommand citep
key Smith2001, Jones2001,Smith2002,Jones2002,Smith2003,Jones2003

\end_inset

All these are handled OK, except when the number of BibTeX keys in the 
in the key text string exceeds 60. When there are more than 60 keys, LyX 
generates the following error message in the Messages window:
12:22:46.359: Document citationtest.lyx opened...\..\src\BiblioInfo.cpp 
(493): Recursion limit reached while parsing
and this is followed by a quoted string containing a large number of 
BiBTeX keys that it tried to parse.


In the main editor window, LyX shows an inset style of box (black text 
on a grey background) with the single word ERROR! instead of a truncated 
list of the relevant citations.


I suspect this must be a bug in the way LyX 2.1.0 now handles multiple 
BibTeX keys in citations. LyX 2.0.7 happily dealt with (and displayed 
correctly) BibTeX key lists that had significantly more than 60 entries.


Note that it is only the way that LyX 2.1.0 parses and displays such 
large key-lists that is a problem. If I process the LyX file to produce 
a PDF (using either the ps2pdf or pdflatex export options), then LaTeX 
processes the full BibTeX keylist without any obvious problem.




3. This relates closely to issue 2 above.

After an ERROR! inset is generated by LyX as it tries to parse a long 
list of BibTeX keys, it is possible to click on this inset and the 
LyX:citation dialog will open.


However, this widget now has a width that is set to about 5 times the 
total width of the screen, which means only a narrow central stripe of 
the widget is visible. It is possible to shift this giant widget across 
the screen to gain access to the Cancel button in the bottom right (and 
thereby to close the widget), but the widget seems to behave very oddly 
if you try to resize it.


I suspect this too must be a bug in LyX 2.1.0.

Graeme


LyX 2.1.0: some issues with citations

2014-05-20 Thread Graeme
On Windows 7 (64 bit) (and Windows XP, 32 bit) I upgraded from LyX 2.0.7 
to 2.1.0 without any obvious problems.


In doing the upgrades, I first uninstalled 2.0.7, but chose the option 
to retain user preferences. Then I installed 2.1.0.


Both operations were carried out using accounts with administrator 
privileges, although I normally use LyX with a standard user account 
that does not have admin privileges.


Mostly LyX 2.1.0 performs smoothly, except that there are several 
aspects of the way it handles citations that are no longer as I expect.


1. With LyX 2.0.7, my default bib-file processor was set to BibTeX8, yet 
when I used LyX 2.1.0 I found that it had defaulted back to plain BibTeX.


It seems that none of the preferences stored in the file
userprofile\Application Data\LyX2.0\preferences
migrate automatically to the file
userprofile\Application Data\LyX2.1\preferences

Of course this problem was easily fixed, but I wondered whether this was 
intended behaviour, or if it is a bug in the Windows Installer (file 
LyX-2.1.0-Installer-2.exe)?




2. A more annoying issue is when you open a file that contains citations 
that use multiple BibTeX keys as the argument to single \cite command


Within the LyX file there are numerous instances of citations with LyX 
code similar to this:

\begin_inset CommandInset citation
LatexCommand citep
key Smith2001, Jones2001,Smith2002,Jones2002,Smith2003,Jones2003

\end_inset

All these are handled OK, except when the number of BibTeX keys in the 
in the key text string exceeds 60. When there are more than 60 keys, LyX 
generates the following error message in the Messages window:
12:22:46.359: Document citationtest.lyx opened...\..\src\BiblioInfo.cpp 
(493): Recursion limit reached while parsing
and this is followed by a quoted string containing a large number of 
BiBTeX keys that it tried to parse.


In the main editor window, LyX shows an inset style of box (black text 
on a grey background) with the single word ERROR! instead of a truncated 
list of the relevant citations.


I suspect this must be a bug in the way LyX 2.1.0 now handles multiple 
BibTeX keys in citations. LyX 2.0.7 happily dealt with (and displayed 
correctly) BibTeX key lists that had significantly more than 60 entries.


Note that it is only the way that LyX 2.1.0 parses and displays such 
large key-lists that is a problem. If I process the LyX file to produce 
a PDF (using either the ps2pdf or pdflatex export options), then LaTeX 
processes the full BibTeX keylist without any obvious problem.




3. This relates closely to issue 2 above.

After an ERROR! inset is generated by LyX as it tries to parse a long 
list of BibTeX keys, it is possible to click on this inset and the 
LyX:citation dialog will open.


However, this widget now has a width that is set to about 5 times the 
total width of the screen, which means only a narrow central stripe of 
the widget is visible. It is possible to shift this giant widget across 
the screen to gain access to the Cancel button in the bottom right (and 
thereby to close the widget), but the widget seems to behave very oddly 
if you try to resize it.


I suspect this too must be a bug in LyX 2.1.0.

Graeme


LyX 2.1.0: some issues with citations

2014-05-20 Thread Graeme
On Windows 7 (64 bit) (and Windows XP, 32 bit) I upgraded from LyX 2.0.7 
to 2.1.0 without any obvious problems.


In doing the upgrades, I first uninstalled 2.0.7, but chose the option 
to retain user preferences. Then I installed 2.1.0.


Both operations were carried out using accounts with administrator 
privileges, although I normally use LyX with a standard user account 
that does not have admin privileges.


Mostly LyX 2.1.0 performs smoothly, except that there are several 
aspects of the way it handles citations that are no longer as I expect.


1. With LyX 2.0.7, my default bib-file processor was set to BibTeX8, yet 
when I used LyX 2.1.0 I found that it had defaulted back to plain BibTeX.


It seems that none of the preferences stored in the file
\Application Data\LyX2.0\preferences
migrate automatically to the file
\Application Data\LyX2.1\preferences

Of course this problem was easily fixed, but I wondered whether this was 
intended behaviour, or if it is a bug in the Windows Installer (file 
LyX-2.1.0-Installer-2.exe)?




2. A more annoying issue is when you open a file that contains citations 
that use multiple BibTeX keys as the argument to single \cite command


Within the LyX file there are numerous instances of citations with LyX 
code similar to this:

\begin_inset CommandInset citation
LatexCommand citep
key "Smith2001, Jones2001,Smith2002,Jones2002,Smith2003,Jones2003"

\end_inset

All these are handled OK, except when the number of BibTeX keys in the 
in the key text string exceeds 60. When there are more than 60 keys, LyX 
generates the following error message in the Messages window:
12:22:46.359: Document citationtest.lyx opened...\..\src\BiblioInfo.cpp 
(493): Recursion limit reached while parsing
and this is followed by a quoted string containing a large number of 
BiBTeX keys that it tried to parse.


In the main editor window, LyX shows an "inset" style of box (black text 
on a grey background) with the single word ERROR! instead of a truncated 
list of the relevant citations.


I suspect this must be a bug in the way LyX 2.1.0 now handles multiple 
BibTeX keys in citations. LyX 2.0.7 happily dealt with (and displayed 
correctly) BibTeX key lists that had significantly more than 60 entries.


Note that it is only the way that LyX 2.1.0 parses and displays such 
large key-lists that is a problem. If I process the LyX file to produce 
a PDF (using either the ps2pdf or pdflatex export options), then LaTeX 
processes the full BibTeX keylist without any obvious problem.




3. This relates closely to issue 2 above.

After an ERROR! inset is generated by LyX as it tries to parse a long 
list of BibTeX keys, it is possible to click on this inset and the 
LyX:citation dialog will open.


However, this widget now has a width that is set to about 5 times the 
total width of the screen, which means only a narrow central stripe of 
the widget is visible. It is possible to shift this giant widget across 
the screen to gain access to the Cancel button in the bottom right (and 
thereby to close the widget), but the widget seems to behave very oddly 
if you try to resize it.


I suspect this too must be a bug in LyX 2.1.0.

Graeme


Re: Problem with citations (author?)

2013-08-05 Thread Csikos Bela
Ignacio Martinez ignaci...@gmail.com írta:

Hi everyone,When I try to add a citation I get see for instance (author?) [1, 
3, 5].How can
I fix this?Thanks a lot
PS: All the files to replicate this problem are available in this dropbox 
folder
https://www.dropbox.com/sh/4y3wj5k1k6q0vfm/gskcO4QZkz

Hello:

This occurs if you use natbib and set citation style to author-year but the 
bst-style file
you specified supports only numeric citations. Either you should set citation 
style to
numeric or choose another bst file which supports author-year citations.

bcsikos




Re: Problem with citations (author?)

2013-08-05 Thread Csikos Bela
Ignacio Martinez ignaci...@gmail.com írta:

Hi everyone,When I try to add a citation I get see for instance (author?) [1, 
3, 5].How can
I fix this?Thanks a lot
PS: All the files to replicate this problem are available in this dropbox 
folder
https://www.dropbox.com/sh/4y3wj5k1k6q0vfm/gskcO4QZkz

Hello:

This occurs if you use natbib and set citation style to author-year but the 
bst-style file
you specified supports only numeric citations. Either you should set citation 
style to
numeric or choose another bst file which supports author-year citations.

bcsikos




Re: Problem with citations (author?)

2013-08-05 Thread Csikos Bela
Ignacio Martinez <ignaci...@gmail.com> írta:

>Hi everyone,When I try to add a citation I get see for instance (author?) [1, 
>3, 5].How can
>I fix this?Thanks a lot
>PS: All the files to replicate this problem are available in this dropbox 
>folder
>https://www.dropbox.com/sh/4y3wj5k1k6q0vfm/gskcO4QZkz

Hello:

This occurs if you use natbib and set citation style to author-year but the 
bst-style file
you specified supports only numeric citations. Either you should set citation 
style to
numeric or choose another bst file which supports author-year citations.

bcsikos




Problem with citations (author?)

2013-08-03 Thread Ignacio Martinez
Hi everyone,

When I try to add a citation I get see for instance (author?) [1, 3, 5].

How can I fix this?

Thanks a lot

PS: All the files to replicate this problem are available in this
dropbox folder https://www.dropbox.com/sh/4y3wj5k1k6q0vfm/gskcO4QZkz


Re: Problem with citations (author?)

2013-08-03 Thread Julien Rioux

On 03/08/2013 9:25 AM, Ignacio Martinez wrote:

Hi everyone,

When I try to add a citation I get see for instance (author?) [1, 3, 5].

How can I fix this?

Thanks a lot

PS: All the files to replicate this problem are available in this
dropbox folder https://www.dropbox.com/sh/4y3wj5k1k6q0vfm/gskcO4QZkz


Hi,

You are using the bibliography style plain, which is intended for use 
with the default (and limited) citation capabilities of LaTeX; for full 
natbib support you should use plainnat (or any other ...nat 
variant). This is changed in the settings for the BibTeX bibliography inset.


Cheers,
Julien



Problem with citations (author?)

2013-08-03 Thread Ignacio Martinez
Hi everyone,

When I try to add a citation I get see for instance (author?) [1, 3, 5].

How can I fix this?

Thanks a lot

PS: All the files to replicate this problem are available in this
dropbox folder https://www.dropbox.com/sh/4y3wj5k1k6q0vfm/gskcO4QZkz


Re: Problem with citations (author?)

2013-08-03 Thread Julien Rioux

On 03/08/2013 9:25 AM, Ignacio Martinez wrote:

Hi everyone,

When I try to add a citation I get see for instance (author?) [1, 3, 5].

How can I fix this?

Thanks a lot

PS: All the files to replicate this problem are available in this
dropbox folder https://www.dropbox.com/sh/4y3wj5k1k6q0vfm/gskcO4QZkz


Hi,

You are using the bibliography style plain, which is intended for use 
with the default (and limited) citation capabilities of LaTeX; for full 
natbib support you should use plainnat (or any other ...nat 
variant). This is changed in the settings for the BibTeX bibliography inset.


Cheers,
Julien



Problem with citations (author?)

2013-08-03 Thread Ignacio Martinez
Hi everyone,

When I try to add a citation I get see for instance (author?) [1, 3, 5].

How can I fix this?

Thanks a lot

PS: All the files to replicate this problem are available in this
dropbox folder https://www.dropbox.com/sh/4y3wj5k1k6q0vfm/gskcO4QZkz


Re: Problem with citations (author?)

2013-08-03 Thread Julien Rioux

On 03/08/2013 9:25 AM, Ignacio Martinez wrote:

Hi everyone,

When I try to add a citation I get see for instance (author?) [1, 3, 5].

How can I fix this?

Thanks a lot

PS: All the files to replicate this problem are available in this
dropbox folder https://www.dropbox.com/sh/4y3wj5k1k6q0vfm/gskcO4QZkz


Hi,

You are using the bibliography style "plain", which is intended for use 
with the default (and limited) citation capabilities of LaTeX; for full 
natbib support you should use "plainnat" (or any other "...nat" 
variant). This is changed in the settings for the BibTeX bibliography inset.


Cheers,
Julien



Re: Multiple citations

2013-07-03 Thread Elena Serioli
Perfect!

Thanks a lot!


2013/7/2 Elena Serioli serr...@gmail.com

 Ok, I created a little example, with a general father document, a
 Chapter 1 and a Bibliography..

 If you create a pdf of the general document I'll see that the second
 citation isn't extended..


 2013/7/2 Liviu Andronic landronim...@gmail.com

 Hello,


 On Tue, Jul 2, 2013 at 3:18 PM, Elena serr...@gmail.com wrote:
  Hi everybody,
 
  I'm having some troubles with multiple citations in Lyx.
 
  When I have to cite more than one bibliographic note per time, what I
 see in
  the PDF is the first citation extended and the other ones just as the
 first
  author's letter..
 
  For example, if I cite Me et al, 2000; You et al, 2001; Them and al,
 2009,
  what I get is (Me and al, 2000, Y, T).
 
 Could you provide us with a very small example of a LyX file and .bib
 file that reproduce the issue? This way we can better investigate what
 goes wrong.

 Liviu





Re: Multiple citations

2013-07-03 Thread Elena Serioli
Perfect!

Thanks a lot!


2013/7/2 Elena Serioli serr...@gmail.com

 Ok, I created a little example, with a general father document, a
 Chapter 1 and a Bibliography..

 If you create a pdf of the general document I'll see that the second
 citation isn't extended..


 2013/7/2 Liviu Andronic landronim...@gmail.com

 Hello,


 On Tue, Jul 2, 2013 at 3:18 PM, Elena serr...@gmail.com wrote:
  Hi everybody,
 
  I'm having some troubles with multiple citations in Lyx.
 
  When I have to cite more than one bibliographic note per time, what I
 see in
  the PDF is the first citation extended and the other ones just as the
 first
  author's letter..
 
  For example, if I cite Me et al, 2000; You et al, 2001; Them and al,
 2009,
  what I get is (Me and al, 2000, Y, T).
 
 Could you provide us with a very small example of a LyX file and .bib
 file that reproduce the issue? This way we can better investigate what
 goes wrong.

 Liviu





Re: Multiple citations

2013-07-03 Thread Elena Serioli
Perfect!

Thanks a lot!


2013/7/2 Elena Serioli <serr...@gmail.com>

> Ok, I created a little example, with a general "father" document, a
> "Chapter 1" and a Bibliography..
>
> If you create a pdf of the general document I'll see that the second
> citation isn't extended..
>
>
> 2013/7/2 Liviu Andronic <landronim...@gmail.com>
>
>> Hello,
>>
>>
>> On Tue, Jul 2, 2013 at 3:18 PM, Elena <serr...@gmail.com> wrote:
>> > Hi everybody,
>> >
>> > I'm having some troubles with multiple citations in Lyx.
>> >
>> > When I have to cite more than one bibliographic note per time, what I
>> see in
>> > the PDF is the first citation extended and the other ones just as the
>> first
>> > author's letter..
>> >
>> > For example, if I cite Me et al, 2000; You et al, 2001; Them and al,
>> 2009,
>> > what I get is (Me and al, 2000, Y, T).
>> >
>> Could you provide us with a very small example of a LyX file and .bib
>> file that reproduce the issue? This way we can better investigate what
>> goes wrong.
>>
>> Liviu
>>
>
>


Multiple citations

2013-07-02 Thread Elena
Hi everybody,

I'm having some troubles with multiple citations in Lyx.

When I have to cite more than one bibliographic note per time, what I see in
the PDF is the first citation extended and the other ones just as the first
author's letter..

For example, if I cite Me et al, 2000; You et al, 2001; Them and al, 2009,
what I get is (Me and al, 2000, Y, T).

Can you help me? 
Tnks! 



Re: Multiple citations

2013-07-02 Thread Liviu Andronic
Hello,


On Tue, Jul 2, 2013 at 3:18 PM, Elena serr...@gmail.com wrote:
 Hi everybody,

 I'm having some troubles with multiple citations in Lyx.

 When I have to cite more than one bibliographic note per time, what I see in
 the PDF is the first citation extended and the other ones just as the first
 author's letter..

 For example, if I cite Me et al, 2000; You et al, 2001; Them and al, 2009,
 what I get is (Me and al, 2000, Y, T).

Could you provide us with a very small example of a LyX file and .bib
file that reproduce the issue? This way we can better investigate what
goes wrong.

Liviu


Re: Multiple citations

2013-07-02 Thread Elena Serioli
Ok, I created a little example, with a general father document, a
Chapter 1 and a Bibliography..

If you create a pdf of the general document I'll see that the second
citation isn't extended..


2013/7/2 Liviu Andronic landronim...@gmail.com

 Hello,


 On Tue, Jul 2, 2013 at 3:18 PM, Elena serr...@gmail.com wrote:
  Hi everybody,
 
  I'm having some troubles with multiple citations in Lyx.
 
  When I have to cite more than one bibliographic note per time, what I
 see in
  the PDF is the first citation extended and the other ones just as the
 first
  author's letter..
 
  For example, if I cite Me et al, 2000; You et al, 2001; Them and al,
 2009,
  what I get is (Me and al, 2000, Y, T).
 
 Could you provide us with a very small example of a LyX file and .bib
 file that reproduce the issue? This way we can better investigate what
 goes wrong.

 Liviu



example bibliogr.lyx
Description: Binary data


example chapt1.lyx
Description: Binary data


example general document.lyx
Description: Binary data


Re: Multiple citations

2013-07-02 Thread Julien Rioux

On 02/07/2013 11:17 AM, Elena Serioli wrote:

Ok, I created a little example, with a general father document, a
Chapter 1 and a Bibliography..

If you create a pdf of the general document I'll see that the second
citation isn't extended..


2013/7/2 Liviu Andronic landronim...@gmail.com
mailto:landronim...@gmail..com

Hello,


On Tue, Jul 2, 2013 at 3:18 PM, Elena serr...@gmail.com
mailto:serr...@gmail.com wrote:
  Hi everybody,
 
  I'm having some troubles with multiple citations in Lyx.
 
  When I have to cite more than one bibliographic note per time,
what I see in
  the PDF is the first citation extended and the other ones just as
the first
  author's letter..
 
  For example, if I cite Me et al, 2000; You et al, 2001; Them and
al, 2009,
  what I get is (Me and al, 2000, Y, T).
 
Could you provide us with a very small example of a LyX file and .bib
file that reproduce the issue? This way we can better investigate what
goes wrong.

Liviu




Hi,
Thanks for providing a small example. The problem is that you need to 
define the label correctly, according to the natbib style, in exactly 
the form Authors(2013). See the attached, corrected and simplified 
example.


Cheers,
Julien


example corrected.lyx
Description: application/lyx


Multiple citations

2013-07-02 Thread Elena
Hi everybody,

I'm having some troubles with multiple citations in Lyx.

When I have to cite more than one bibliographic note per time, what I see in
the PDF is the first citation extended and the other ones just as the first
author's letter..

For example, if I cite Me et al, 2000; You et al, 2001; Them and al, 2009,
what I get is (Me and al, 2000, Y, T).

Can you help me? 
Tnks! 



Re: Multiple citations

2013-07-02 Thread Liviu Andronic
Hello,


On Tue, Jul 2, 2013 at 3:18 PM, Elena serr...@gmail.com wrote:
 Hi everybody,

 I'm having some troubles with multiple citations in Lyx.

 When I have to cite more than one bibliographic note per time, what I see in
 the PDF is the first citation extended and the other ones just as the first
 author's letter..

 For example, if I cite Me et al, 2000; You et al, 2001; Them and al, 2009,
 what I get is (Me and al, 2000, Y, T).

Could you provide us with a very small example of a LyX file and .bib
file that reproduce the issue? This way we can better investigate what
goes wrong.

Liviu


Re: Multiple citations

2013-07-02 Thread Elena Serioli
Ok, I created a little example, with a general father document, a
Chapter 1 and a Bibliography..

If you create a pdf of the general document I'll see that the second
citation isn't extended..


2013/7/2 Liviu Andronic landronim...@gmail.com

 Hello,


 On Tue, Jul 2, 2013 at 3:18 PM, Elena serr...@gmail.com wrote:
  Hi everybody,
 
  I'm having some troubles with multiple citations in Lyx.
 
  When I have to cite more than one bibliographic note per time, what I
 see in
  the PDF is the first citation extended and the other ones just as the
 first
  author's letter..
 
  For example, if I cite Me et al, 2000; You et al, 2001; Them and al,
 2009,
  what I get is (Me and al, 2000, Y, T).
 
 Could you provide us with a very small example of a LyX file and .bib
 file that reproduce the issue? This way we can better investigate what
 goes wrong.

 Liviu



example bibliogr.lyx
Description: Binary data


example chapt1.lyx
Description: Binary data


example general document.lyx
Description: Binary data


Re: Multiple citations

2013-07-02 Thread Julien Rioux

On 02/07/2013 11:17 AM, Elena Serioli wrote:

Ok, I created a little example, with a general father document, a
Chapter 1 and a Bibliography..

If you create a pdf of the general document I'll see that the second
citation isn't extended..


2013/7/2 Liviu Andronic landronim...@gmail.com
mailto:landronim...@gmail..com

Hello,


On Tue, Jul 2, 2013 at 3:18 PM, Elena serr...@gmail.com
mailto:serr...@gmail.com wrote:
  Hi everybody,
 
  I'm having some troubles with multiple citations in Lyx.
 
  When I have to cite more than one bibliographic note per time,
what I see in
  the PDF is the first citation extended and the other ones just as
the first
  author's letter..
 
  For example, if I cite Me et al, 2000; You et al, 2001; Them and
al, 2009,
  what I get is (Me and al, 2000, Y, T).
 
Could you provide us with a very small example of a LyX file and .bib
file that reproduce the issue? This way we can better investigate what
goes wrong.

Liviu




Hi,
Thanks for providing a small example. The problem is that you need to 
define the label correctly, according to the natbib style, in exactly 
the form Authors(2013). See the attached, corrected and simplified 
example.


Cheers,
Julien


example corrected.lyx
Description: application/lyx


Multiple citations

2013-07-02 Thread Elena
Hi everybody,

I'm having some troubles with multiple citations in Lyx.

When I have to cite more than one bibliographic note per time, what I see in
the PDF is the first citation extended and the other ones just as the first
author's letter..

For example, if I cite Me et al, 2000; You et al, 2001; Them and al, 2009,
what I get is (Me and al, 2000, Y, T).

Can you help me? 
Tnks! 



Re: Multiple citations

2013-07-02 Thread Liviu Andronic
Hello,


On Tue, Jul 2, 2013 at 3:18 PM, Elena <serr...@gmail.com> wrote:
> Hi everybody,
>
> I'm having some troubles with multiple citations in Lyx.
>
> When I have to cite more than one bibliographic note per time, what I see in
> the PDF is the first citation extended and the other ones just as the first
> author's letter..
>
> For example, if I cite Me et al, 2000; You et al, 2001; Them and al, 2009,
> what I get is (Me and al, 2000, Y, T).
>
Could you provide us with a very small example of a LyX file and .bib
file that reproduce the issue? This way we can better investigate what
goes wrong.

Liviu


Re: Multiple citations

2013-07-02 Thread Elena Serioli
Ok, I created a little example, with a general "father" document, a
"Chapter 1" and a Bibliography..

If you create a pdf of the general document I'll see that the second
citation isn't extended..


2013/7/2 Liviu Andronic <landronim...@gmail.com>

> Hello,
>
>
> On Tue, Jul 2, 2013 at 3:18 PM, Elena <serr...@gmail.com> wrote:
> > Hi everybody,
> >
> > I'm having some troubles with multiple citations in Lyx.
> >
> > When I have to cite more than one bibliographic note per time, what I
> see in
> > the PDF is the first citation extended and the other ones just as the
> first
> > author's letter..
> >
> > For example, if I cite Me et al, 2000; You et al, 2001; Them and al,
> 2009,
> > what I get is (Me and al, 2000, Y, T).
> >
> Could you provide us with a very small example of a LyX file and .bib
> file that reproduce the issue? This way we can better investigate what
> goes wrong.
>
> Liviu
>


example bibliogr.lyx
Description: Binary data


example chapt1.lyx
Description: Binary data


example general document.lyx
Description: Binary data


Re: Multiple citations

2013-07-02 Thread Julien Rioux

On 02/07/2013 11:17 AM, Elena Serioli wrote:

Ok, I created a little example, with a general "father" document, a
"Chapter 1" and a Bibliography..

If you create a pdf of the general document I'll see that the second
citation isn't extended..


2013/7/2 Liviu Andronic <landronim...@gmail.com
<mailto:landronim...@gmail..com>>

Hello,


On Tue, Jul 2, 2013 at 3:18 PM, Elena <serr...@gmail.com
<mailto:serr...@gmail.com>> wrote:
 > Hi everybody,
 >
 > I'm having some troubles with multiple citations in Lyx.
 >
 > When I have to cite more than one bibliographic note per time,
what I see in
 > the PDF is the first citation extended and the other ones just as
the first
 > author's letter..
 >
 > For example, if I cite Me et al, 2000; You et al, 2001; Them and
al, 2009,
 > what I get is (Me and al, 2000, Y, T).
 >
Could you provide us with a very small example of a LyX file and .bib
file that reproduce the issue? This way we can better investigate what
goes wrong.

Liviu




Hi,
Thanks for providing a small example. The problem is that you need to 
define the label correctly, according to the natbib style, in exactly 
the form "Authors(2013)". See the attached, corrected and simplified 
example.


Cheers,
Julien


example corrected.lyx
Description: application/lyx


How to search for citations?

2013-05-06 Thread Andreas Hilboll
Hi,

is it possible to somehow include the citation keys of a BibTeX database
in the search functionality of LyX? For example, I'd like to press
CTRL+F, type the name of an author, and be taken to the place where I
cited this author's publication. However, currently, the CTRL+F search
seems to exclude the citation keys, so that I can only find instances of
the author's name which are *not* part of a citation key.

Any ideas are greatly appreciated :)

Cheers, Andreas.


Re: How to search for citations?

2013-05-06 Thread Jürgen Spitzmüller
Am Montag 06 Mai 2013, 16:47:26 schrieb Andreas Hilboll:
 is it possible to somehow include the citation keys of a BibTeX database
 in the search functionality of LyX? For example, I'd like to press
 CTRL+F, type the name of an author, and be taken to the place where I
 cited this author's publication. However, currently, the CTRL+F search
 seems to exclude the citation keys, so that I can only find instances of
 the author's name which are *not* part of a citation key.
 
 Any ideas are greatly appreciated

Try Document  Outline (you can select Citations from the combo box).

Jürgen


Re: How to search for citations?

2013-05-06 Thread Andreas Hilboll
On 06.05.2013 16:55, Jürgen Spitzmüller wrote:
 Am Montag 06 Mai 2013, 16:47:26 schrieb Andreas Hilboll:
 is it possible to somehow include the citation keys of a BibTeX database
 in the search functionality of LyX? For example, I'd like to press
 CTRL+F, type the name of an author, and be taken to the place where I
 cited this author's publication. However, currently, the CTRL+F search
 seems to exclude the citation keys, so that I can only find instances of
 the author's name which are *not* part of a citation key.

 Any ideas are greatly appreciated
 
 Try Document  Outline (you can select Citations from the combo box).
 
 Jürgen
 

Nice. Thank you, Jürgen!
A.


How to search for citations?

2013-05-06 Thread Andreas Hilboll
Hi,

is it possible to somehow include the citation keys of a BibTeX database
in the search functionality of LyX? For example, I'd like to press
CTRL+F, type the name of an author, and be taken to the place where I
cited this author's publication. However, currently, the CTRL+F search
seems to exclude the citation keys, so that I can only find instances of
the author's name which are *not* part of a citation key.

Any ideas are greatly appreciated :)

Cheers, Andreas.


Re: How to search for citations?

2013-05-06 Thread Jürgen Spitzmüller
Am Montag 06 Mai 2013, 16:47:26 schrieb Andreas Hilboll:
 is it possible to somehow include the citation keys of a BibTeX database
 in the search functionality of LyX? For example, I'd like to press
 CTRL+F, type the name of an author, and be taken to the place where I
 cited this author's publication. However, currently, the CTRL+F search
 seems to exclude the citation keys, so that I can only find instances of
 the author's name which are *not* part of a citation key.
 
 Any ideas are greatly appreciated

Try Document  Outline (you can select Citations from the combo box).

Jürgen


Re: How to search for citations?

2013-05-06 Thread Andreas Hilboll
On 06.05.2013 16:55, Jürgen Spitzmüller wrote:
 Am Montag 06 Mai 2013, 16:47:26 schrieb Andreas Hilboll:
 is it possible to somehow include the citation keys of a BibTeX database
 in the search functionality of LyX? For example, I'd like to press
 CTRL+F, type the name of an author, and be taken to the place where I
 cited this author's publication. However, currently, the CTRL+F search
 seems to exclude the citation keys, so that I can only find instances of
 the author's name which are *not* part of a citation key.

 Any ideas are greatly appreciated
 
 Try Document  Outline (you can select Citations from the combo box).
 
 Jürgen
 

Nice. Thank you, Jürgen!
A.


How to search for citations?

2013-05-06 Thread Andreas Hilboll
Hi,

is it possible to somehow include the citation keys of a BibTeX database
in the "search" functionality of LyX? For example, I'd like to press
CTRL+F, type the name of an author, and be taken to the place where I
cited this author's publication. However, currently, the CTRL+F search
seems to exclude the citation keys, so that I can only find instances of
the author's name which are *not* part of a citation key.

Any ideas are greatly appreciated :)

Cheers, Andreas.


Re: How to search for citations?

2013-05-06 Thread Jürgen Spitzmüller
Am Montag 06 Mai 2013, 16:47:26 schrieb Andreas Hilboll:
> is it possible to somehow include the citation keys of a BibTeX database
> in the "search" functionality of LyX? For example, I'd like to press
> CTRL+F, type the name of an author, and be taken to the place where I
> cited this author's publication. However, currently, the CTRL+F search
> seems to exclude the citation keys, so that I can only find instances of
> the author's name which are *not* part of a citation key.
> 
> Any ideas are greatly appreciated

Try Document > Outline (you can select Citations from the combo box).

Jürgen


Re: How to search for citations?

2013-05-06 Thread Andreas Hilboll
On 06.05.2013 16:55, Jürgen Spitzmüller wrote:
> Am Montag 06 Mai 2013, 16:47:26 schrieb Andreas Hilboll:
>> is it possible to somehow include the citation keys of a BibTeX database
>> in the "search" functionality of LyX? For example, I'd like to press
>> CTRL+F, type the name of an author, and be taken to the place where I
>> cited this author's publication. However, currently, the CTRL+F search
>> seems to exclude the citation keys, so that I can only find instances of
>> the author's name which are *not* part of a citation key.
>>
>> Any ideas are greatly appreciated
> 
> Try Document > Outline (you can select Citations from the combo box).
> 
> Jürgen
> 

Nice. Thank you, Jürgen!
A.


Re: Citations are not working.

2013-04-23 Thread John Kane
Sorry to take so long to get back to you.


@ Jacob,

Many thanks for both your and Ray's help.  I read through both and tried yours 
first and you were right.  I had thought that I had I had changed that setting 
but I had not.  For some reason I seem to hit cancel rather than save in LyX 
settings sometimes.  It took two tries just now. 


@ Ray
I am definitely going to save your post for my next emergency but what exactly 
does the code do? . Some kind of complete reset to default settings for a 
program?


I'm a newcomer to Linux and a lot of commands are not yet intuitive.  






 From: Jacob Bishop bishop.ja...@gmail.com
To: Ray Rashif schivmeis...@gmail.com 
Cc: John Kane jrkrid...@yahoo.ca; Lyx List lyx-users@lists.lyx.org 
Sent: Monday, April 22, 2013 12:51:46 PM
Subject: Re: Citations are not working.
 


On Sun, Apr 21, 2013 at 10:43 AM, Ray Rashif schivmeis...@gmail.com wrote:

On 21 April 2013 21:28, John Kane jrkrid...@yahoo.ca wrote:
 I seem to be rapidly losing any ability to work with LyX.  In the attached
 example I cannot get citations to work. I originally added the citations
 using the Lyz plug-in for Zotero but a quick and non-expert look at the bib
 file suggests it's okay and JabRef seems happy with it.

 I obviously am doing something stupid but what?

 Or, have I really managed to muck up some settings on my system since my
 less than sucessful attempt to switch to biblatex?

 
This latter option seems most likely to me. This is the major drawback in my 
opinion of the current way of using biblatex. As I recall, you have to set your 
biblatex options under tools-preferences-output-LaTeX-Bibliography 
generation. What I would personally prefer is the ability to set this option on 
a per-document basis. Unfortunately, this does not seem to be the case. I'm 
guessing that setting the processor back to bibtex should solve the problem.


Ray's suggestion will probably work, but it would be good to check those 
preferences to see if that is in fact the source of the problem.


I hope this helps,


Jacob

Re: Citations are not working.

2013-04-23 Thread Ray Rashif
On 23 April 2013 19:39, John Kane jrkrid...@yahoo.ca wrote:
 Sorry to take so long to get back to you.

 @ Jacob,
 Many thanks for both your and Ray's help.  I read through both and tried
 yours first and you were right.  I had thought that I had I had changed that
 setting but I had not.  For some reason I seem to hit cancel rather than
 save in LyX settings sometimes.  It took two tries just now.

 @ Ray
 I am definitely going to save your post for my next emergency but what
 exactly does the code do? . Some kind of complete reset to default settings
 for a program?

 I'm a newcomer to Linux and a lot of commands are not yet intuitive.

I'm glad that Jacob actually chimed in to suggest the simplest
approach first -- I should've mentioned that alongside as well.
Indeed, the moving of the directories completely resets LyX (think of
how you will do the same thing on Windows; removing stuff from
%APPDATA%). On Linux and other GNU systems, ~/ (as dot files) and
~/.config are common config dumping grounds.

It's usually just a quick fix to check whether the program actually
runs with default settings (provided its files in the root/admin file
system have not changed), but I suggested it on the presumption that
it would be followed by a comparison of the original and existing
configs. In short, this should be a last resort (which I had thought
was the case).

--
GPG/PGP ID: C0711BF1


Re: Citations are not working.

2013-04-23 Thread John Kane




 From: Ray Rashif schivmeis...@gmail.com
To: John Kane jrkrid...@yahoo.ca 
Cc: Jacob Bishop bishop.ja...@gmail.com; Lyx List lyx-users@lists.lyx.org 
Sent: Tuesday, April 23, 2013 8:51:40 AM
Subject: Re: Citations are not working.
 

On 23 April 2013 19:39, John Kane jrkrid...@yahoo.ca wrote:
 Sorry to take so long to get back to you.

 @ Jacob,
 Many thanks for both your and Ray's help.  I read through both and tried
 yours first and you were right.  I had thought that I had I had changed that
 setting but I had not.  For some reason I seem to hit cancel rather than
 save in LyX settings sometimes.  It took two tries just now.

 @ Ray
 I am definitely going to save your post for my next emergency but what
 exactly does the code do? . Some kind of complete reset to default settings
 for a program?

 I'm a newcomer to Linux and a lot of commands are not yet intuitive.

I'm glad that Jacob actually chimed in to suggest the simplest
approach first -- I should've mentioned that alongside as well.
Indeed, the moving of the directories completely resets LyX (think of
how you will do the same thing on Windows; removing stuff from
%APPDATA%). On Linux and other GNU systems, ~/ (as dot files) and
~/.config are common config dumping grounds.

It's usually just a quick fix to check whether the program actually
runs with default settings (provided its files in the root/admin file
system have not changed), but I suggested it on the presumption that
it would be followed by a comparison of the original and existing
configs. In short, this should be a last resort (which I had thought
was the case).

--
GPG/PGP ID: C0711BF1

Ah I think I see what it does now.  I even think it makes some sense! At its 
most cryptic Linux is still easier than JCL.

Many thanks

Re: Citations are not working.

2013-04-23 Thread John Kane
Sorry to take so long to get back to you.


@ Jacob,

Many thanks for both your and Ray's help.  I read through both and tried yours 
first and you were right.  I had thought that I had I had changed that setting 
but I had not.  For some reason I seem to hit cancel rather than save in LyX 
settings sometimes.  It took two tries just now. 


@ Ray
I am definitely going to save your post for my next emergency but what exactly 
does the code do? . Some kind of complete reset to default settings for a 
program?


I'm a newcomer to Linux and a lot of commands are not yet intuitive.  






 From: Jacob Bishop bishop.ja...@gmail.com
To: Ray Rashif schivmeis...@gmail.com 
Cc: John Kane jrkrid...@yahoo.ca; Lyx List lyx-users@lists.lyx.org 
Sent: Monday, April 22, 2013 12:51:46 PM
Subject: Re: Citations are not working.
 


On Sun, Apr 21, 2013 at 10:43 AM, Ray Rashif schivmeis...@gmail.com wrote:

On 21 April 2013 21:28, John Kane jrkrid...@yahoo.ca wrote:
 I seem to be rapidly losing any ability to work with LyX.  In the attached
 example I cannot get citations to work. I originally added the citations
 using the Lyz plug-in for Zotero but a quick and non-expert look at the bib
 file suggests it's okay and JabRef seems happy with it.

 I obviously am doing something stupid but what?

 Or, have I really managed to muck up some settings on my system since my
 less than sucessful attempt to switch to biblatex?

 
This latter option seems most likely to me. This is the major drawback in my 
opinion of the current way of using biblatex. As I recall, you have to set your 
biblatex options under tools-preferences-output-LaTeX-Bibliography 
generation. What I would personally prefer is the ability to set this option on 
a per-document basis. Unfortunately, this does not seem to be the case. I'm 
guessing that setting the processor back to bibtex should solve the problem.


Ray's suggestion will probably work, but it would be good to check those 
preferences to see if that is in fact the source of the problem.


I hope this helps,


Jacob

Re: Citations are not working.

2013-04-23 Thread Ray Rashif
On 23 April 2013 19:39, John Kane jrkrid...@yahoo.ca wrote:
 Sorry to take so long to get back to you.

 @ Jacob,
 Many thanks for both your and Ray's help.  I read through both and tried
 yours first and you were right.  I had thought that I had I had changed that
 setting but I had not.  For some reason I seem to hit cancel rather than
 save in LyX settings sometimes.  It took two tries just now.

 @ Ray
 I am definitely going to save your post for my next emergency but what
 exactly does the code do? . Some kind of complete reset to default settings
 for a program?

 I'm a newcomer to Linux and a lot of commands are not yet intuitive.

I'm glad that Jacob actually chimed in to suggest the simplest
approach first -- I should've mentioned that alongside as well.
Indeed, the moving of the directories completely resets LyX (think of
how you will do the same thing on Windows; removing stuff from
%APPDATA%). On Linux and other GNU systems, ~/ (as dot files) and
~/.config are common config dumping grounds.

It's usually just a quick fix to check whether the program actually
runs with default settings (provided its files in the root/admin file
system have not changed), but I suggested it on the presumption that
it would be followed by a comparison of the original and existing
configs. In short, this should be a last resort (which I had thought
was the case).

--
GPG/PGP ID: C0711BF1


Re: Citations are not working.

2013-04-23 Thread John Kane




 From: Ray Rashif schivmeis...@gmail.com
To: John Kane jrkrid...@yahoo.ca 
Cc: Jacob Bishop bishop.ja...@gmail.com; Lyx List lyx-users@lists.lyx.org 
Sent: Tuesday, April 23, 2013 8:51:40 AM
Subject: Re: Citations are not working.
 

On 23 April 2013 19:39, John Kane jrkrid...@yahoo.ca wrote:
 Sorry to take so long to get back to you.

 @ Jacob,
 Many thanks for both your and Ray's help.  I read through both and tried
 yours first and you were right.  I had thought that I had I had changed that
 setting but I had not.  For some reason I seem to hit cancel rather than
 save in LyX settings sometimes.  It took two tries just now.

 @ Ray
 I am definitely going to save your post for my next emergency but what
 exactly does the code do? . Some kind of complete reset to default settings
 for a program?

 I'm a newcomer to Linux and a lot of commands are not yet intuitive.

I'm glad that Jacob actually chimed in to suggest the simplest
approach first -- I should've mentioned that alongside as well.
Indeed, the moving of the directories completely resets LyX (think of
how you will do the same thing on Windows; removing stuff from
%APPDATA%). On Linux and other GNU systems, ~/ (as dot files) and
~/.config are common config dumping grounds.

It's usually just a quick fix to check whether the program actually
runs with default settings (provided its files in the root/admin file
system have not changed), but I suggested it on the presumption that
it would be followed by a comparison of the original and existing
configs. In short, this should be a last resort (which I had thought
was the case).

--
GPG/PGP ID: C0711BF1

Ah I think I see what it does now.  I even think it makes some sense! At its 
most cryptic Linux is still easier than JCL.

Many thanks

Re: Citations are not working.

2013-04-23 Thread John Kane
Sorry to take so long to get back to you.


@ Jacob,

Many thanks for both your and Ray's help.  I read through both and tried yours 
first and you were right.  I had thought that I had I had changed that setting 
but I had not.  For some reason I seem to hit cancel rather than save in LyX 
settings sometimes.  It took two tries just now. 


@ Ray
I am definitely going to save your post for my next emergency but what exactly 
does the code do? . Some kind of complete reset to default settings for a 
program?


I'm a newcomer to Linux and a lot of commands are not yet intuitive.  






 From: Jacob Bishop <bishop.ja...@gmail.com>
To: Ray Rashif <schivmeis...@gmail.com> 
Cc: John Kane <jrkrid...@yahoo.ca>; Lyx List <lyx-users@lists.lyx.org> 
Sent: Monday, April 22, 2013 12:51:46 PM
Subject: Re: Citations are not working.
 


On Sun, Apr 21, 2013 at 10:43 AM, Ray Rashif <schivmeis...@gmail.com> wrote:

On 21 April 2013 21:28, John Kane <jrkrid...@yahoo.ca> wrote:
>> I seem to be rapidly losing any ability to work with LyX.  In the attached
>> example I cannot get citations to work. I originally added the citations
>> using the Lyz plug-in for Zotero but a quick and non-expert look at the bib
>> file suggests it's okay and JabRef seems happy with it.
>>
>> I obviously am doing something stupid but what?
>>
>> Or, have I really managed to muck up some settings on my system since my
>> less than sucessful attempt to switch to biblatex?
>
 
This latter option seems most likely to me. This is the major drawback in my 
opinion of the current way of using biblatex. As I recall, you have to set your 
biblatex options under tools->preferences->output->LaTeX->Bibliography 
generation. What I would personally prefer is the ability to set this option on 
a per-document basis. Unfortunately, this does not seem to be the case. I'm 
guessing that setting the processor back to bibtex should solve the problem.


Ray's suggestion will probably work, but it would be good to check those 
preferences to see if that is in fact the source of the problem.


I hope this helps,


Jacob

Re: Citations are not working.

2013-04-23 Thread Ray Rashif
On 23 April 2013 19:39, John Kane  wrote:
> Sorry to take so long to get back to you.
>
> @ Jacob,
> Many thanks for both your and Ray's help.  I read through both and tried
> yours first and you were right.  I had thought that I had I had changed that
> setting but I had not.  For some reason I seem to hit cancel rather than
> save in LyX settings sometimes.  It took two tries just now.
>
> @ Ray
> I am definitely going to save your post for my next emergency but what
> exactly does the code do? . Some kind of complete reset to default settings
> for a program?
>
> I'm a newcomer to Linux and a lot of commands are not yet intuitive.

I'm glad that Jacob actually chimed in to suggest the simplest
approach first -- I should've mentioned that alongside as well.
Indeed, the moving of the directories completely resets LyX (think of
how you will do the same thing on Windows; removing stuff from
%APPDATA%). On Linux and other GNU systems, ~/ (as dot files) and
~/.config are common config dumping grounds.

It's usually just a "quick fix" to check whether the program actually
runs with default settings (provided its files in the root/admin file
system have not changed), but I suggested it on the presumption that
it would be followed by a comparison of the original and existing
configs. In short, this should be a last resort (which I had thought
was the case).

--
GPG/PGP ID: C0711BF1


Re: Citations are not working.

2013-04-23 Thread John Kane




 From: Ray Rashif <schivmeis...@gmail.com>
To: John Kane <jrkrid...@yahoo.ca> 
Cc: Jacob Bishop <bishop.ja...@gmail.com>; Lyx List <lyx-users@lists.lyx.org> 
Sent: Tuesday, April 23, 2013 8:51:40 AM
Subject: Re: Citations are not working.
 

On 23 April 2013 19:39, John Kane <jrkrid...@yahoo.ca> wrote:
> Sorry to take so long to get back to you.
>
> @ Jacob,
> Many thanks for both your and Ray's help.  I read through both and tried
> yours first and you were right.  I had thought that I had I had changed that
> setting but I had not.  For some reason I seem to hit cancel rather than
> save in LyX settings sometimes.  It took two tries just now.
>
> @ Ray
> I am definitely going to save your post for my next emergency but what
> exactly does the code do? . Some kind of complete reset to default settings
> for a program?
>
> I'm a newcomer to Linux and a lot of commands are not yet intuitive.

I'm glad that Jacob actually chimed in to suggest the simplest
approach first -- I should've mentioned that alongside as well.
Indeed, the moving of the directories completely resets LyX (think of
how you will do the same thing on Windows; removing stuff from
%APPDATA%). On Linux and other GNU systems, ~/ (as dot files) and
~/.config are common config dumping grounds.

It's usually just a "quick fix" to check whether the program actually
runs with default settings (provided its files in the root/admin file
system have not changed), but I suggested it on the presumption that
it would be followed by a comparison of the original and existing
configs. In short, this should be a last resort (which I had thought
was the case).

--
GPG/PGP ID: C0711BF1

Ah I think I see what it does now.  I even think it makes some sense! At its 
most cryptic Linux is still easier than JCL.

Many thanks

Re: Citations are not working.

2013-04-22 Thread Jacob Bishop
On Sun, Apr 21, 2013 at 10:43 AM, Ray Rashif schivmeis...@gmail.com wrote:

 On 21 April 2013 21:28, John Kane jrkrid...@yahoo.ca wrote:
  I seem to be rapidly losing any ability to work with LyX.  In the
 attached
  example I cannot get citations to work. I originally added the citations
  using the Lyz plug-in for Zotero but a quick and non-expert look at the
 bib
  file suggests it's okay and JabRef seems happy with it.
 
  I obviously am doing something stupid but what?
 
  Or, have I really managed to muck up some settings on my system since my
  less than sucessful attempt to switch to biblatex?


This latter option seems most likely to me. This is the major drawback in
my opinion of the current way of using biblatex. As I recall, you have to
set your biblatex options under
tools-preferences-output-LaTeX-Bibliography generation. What I would
personally prefer is the ability to set this option on a per-document
basis. Unfortunately, this does not seem to be the case. I'm guessing that
setting the processor back to bibtex should solve the problem.

Ray's suggestion will probably work, but it would be good to check those
preferences to see if that is in fact the source of the problem.

I hope this helps,

Jacob


Re: Citations are not working.

2013-04-22 Thread Jacob Bishop
On Sun, Apr 21, 2013 at 10:43 AM, Ray Rashif schivmeis...@gmail.com wrote:

 On 21 April 2013 21:28, John Kane jrkrid...@yahoo.ca wrote:
  I seem to be rapidly losing any ability to work with LyX.  In the
 attached
  example I cannot get citations to work. I originally added the citations
  using the Lyz plug-in for Zotero but a quick and non-expert look at the
 bib
  file suggests it's okay and JabRef seems happy with it.
 
  I obviously am doing something stupid but what?
 
  Or, have I really managed to muck up some settings on my system since my
  less than sucessful attempt to switch to biblatex?


This latter option seems most likely to me. This is the major drawback in
my opinion of the current way of using biblatex. As I recall, you have to
set your biblatex options under
tools-preferences-output-LaTeX-Bibliography generation. What I would
personally prefer is the ability to set this option on a per-document
basis. Unfortunately, this does not seem to be the case. I'm guessing that
setting the processor back to bibtex should solve the problem.

Ray's suggestion will probably work, but it would be good to check those
preferences to see if that is in fact the source of the problem.

I hope this helps,

Jacob


Re: Citations are not working.

2013-04-22 Thread Jacob Bishop
On Sun, Apr 21, 2013 at 10:43 AM, Ray Rashif <schivmeis...@gmail.com> wrote:

> On 21 April 2013 21:28, John Kane <jrkrid...@yahoo.ca> wrote:
> > I seem to be rapidly losing any ability to work with LyX.  In the
> attached
> > example I cannot get citations to work. I originally added the citations
> > using the Lyz plug-in for Zotero but a quick and non-expert look at the
> bib
> > file suggests it's okay and JabRef seems happy with it.
> >
> > I obviously am doing something stupid but what?
> >
> > Or, have I really managed to muck up some settings on my system since my
> > less than sucessful attempt to switch to biblatex?
>

This latter option seems most likely to me. This is the major drawback in
my opinion of the current way of using biblatex. As I recall, you have to
set your biblatex options under
tools->preferences->output->LaTeX->Bibliography generation. What I would
personally prefer is the ability to set this option on a per-document
basis. Unfortunately, this does not seem to be the case. I'm guessing that
setting the processor back to bibtex should solve the problem.

Ray's suggestion will probably work, but it would be good to check those
preferences to see if that is in fact the source of the problem.

I hope this helps,

Jacob


Citations are not working.

2013-04-21 Thread John Kane
I seem to be rapidly losing any ability to work with LyX.  In the attached 
example I cannot get citations to work. I originally added the citations using 
the Lyz plug-in for Zotero but a quick and non-expert look at the bib file 
suggests it's okay and JabRef seems happy with it.

I obviously am doing something stupid but what?  

Or, have I really managed to muck up some settings on my system since my less 
than sucessful attempt to switch to biblatex?




Thanks.

LyX 2.0.5.1 on Ubuntu 12.10 , Tex Live 2012.20120611-4

april21.lyx
Description: application/lyx
0_ZHNGEKE6 0_IBAUQ38B

@article{anderegg2010expertcredibility,
	title = {Expert Credibility in Climate Change},
	issn = {0027-8424, 1091-6490},
	url = {http://www.pnas.org/content/early/2010/06/04/1003187107},
	doi = {10.1073/pnas.1003187107},
	abstract = {Although preliminary estimates from published literature and expert surveys suggest striking agreement among climate scientists on the tenets of anthropogenic climate change ({ACC)}, the American public expresses substantial doubt about both the anthropogenic cause and the level of scientific agreement underpinning {ACC.} A broad analysis of the climate scientist community itself, the distribution of credibility of dissenting researchers relative to agreeing researchers, and the level of agreement among top climate experts has not been conducted and would inform future {ACC} discussions. Here, we use an extensive dataset of 1,372 climate researchers and their publication and citation data to show that (i) 97{\textendash}98\% of the climate researchers most actively publishing in the field support the tenets of {ACC} outlined by the Intergovernmental Panel on Climate Change, and (ii) the relative climate expertise and scientific prominence of the researchers unconvinced of {ACC} are substantially below that of the convinced researchers.},
	language = {en},
	urldate = {2012-03-16},
	journal = {Proceedings of the National Academy of Sciences},
	author = {Anderegg, William R. L and Prall, James W and Harold, Jacob and Schneider, Stephen H},
	month = jun,
	year = {2010},
	keywords = {citation analyses, climate denier, expertise, publication analysis, scientific prominence},
	file = {Full Text PDF:/home/john/.mozilla/firefox/zsw2qavt.default/zotero/storage/WNRG99G7/Anderegg et al. - 2010 - Expert Credibility in Climate Change.pdf:application/pdf;Snapshot:/home/john/.mozilla/firefox/zsw2qavt.default/zotero/storage/7PKIH5F5/1003187107.html:text/html}
}

@article{acton1996bicycle,
	title = {Bicycle riding and oral/maxillofacial trauma in young children.},
	volume = {165},
	abstract = {{OBJECTIVES:} To investigate the frequency of oral/maxillofacial injuries in children who have had a bicycle incident and to relate this to the wearing of a protective helmet. {DESIGN:} Part of a larger prospective study in which self-administered questionnaires were completed by each child with bicycle-related injuries and their parents or caregivers. {SETTING:} Two tertiary-referral children's hospitals (between 1 April 1991 and 30 June 1992) and three general hospitals (between 1 August 1991 and 30 June 1992) in Brisbane. {PARTICIPANTS:} 813 children aged under 15 years who presented to the accident and emergency departments with bicycle-related injuries. {RESULTS:} There were 321 children (39.5\%) who sustained oral/maxillofacial injuries. Of 1355 injuries, 340 (25.1\%) were to the facial region. Of the 153 children admitted to hospital for bicycle-related injuries, 94 (61.4\%) had oral/maxillofacial injury as the primary reason for admission (including those with a reduced level of consciousness). Of the 66 children with a reduced level of consciousness, 53 had concomitant facial injuries. The most common oral/maxillofacial injuries were facial abrasions, cuts and lacerations (50.3\%); soft tissue injuries to the mouth (30.9\%); and dentoalveolar trauma (9.7\%). Over half of these children were wearing bicycle helmets. Of the 15 facial fractures (mandibular, nasal, and zygomatico-orbital), 10 were in children wearing helmets. {CONCLUSIONS:} Oral/maxillofacial injuries are frequent among child bicycle riders, even for those who wear Australian Standards-approved bicycle helmets. Bicycle helmets need design modifications (e.g., lightweight chin protectors) to more adequately protect the face and jaw.},
	number = {5},
	journal = {Medical Journal of Australia},
	author = {Acton, C. H. and Nixon, J. W. and Clark, R. C.},
	month = sep,
	year = {1996},
	keywords = {Adolescent; Alveolar Process; Bicycling; Child; Child, Non-{U.S.} Gov't; Skull Fractures; Soft Tissue Injuries; Tooth Injuries; Zygomatic Fractures, Pediatric; Humans; Male; Mandibular Fractures; Maxillofacial Injuries; Mouth; Nasal Bone; Orbital Fractures; Patient Admission; Prospective Studies; Queensland; Questionnaires; Research Support, Preschool; Consciousness; Facial Injuries; Female; Head Protective Devices; Hospitals},
	pages = {249{\textendash}251}
}

Re: Citations are not working.

2013-04-21 Thread Ray Rashif
On 21 April 2013 21:28, John Kane jrkrid...@yahoo.ca wrote:
 I seem to be rapidly losing any ability to work with LyX.  In the attached
 example I cannot get citations to work. I originally added the citations
 using the Lyz plug-in for Zotero but a quick and non-expert look at the bib
 file suggests it's okay and JabRef seems happy with it.

 I obviously am doing something stupid but what?

 Or, have I really managed to muck up some settings on my system since my
 less than sucessful attempt to switch to biblatex?

I am not able to reproduce any problem (you do not describe any).
Citations do appear and the (list of) references are there.

To start LyX afresh, here are the Linux-specific steps:

mv ~/.lyx ~/.lyx.bak
mv ~/.config/LyX ~/.config/LyX.bak

See if your citations are not working after that.

--
GPG/PGP ID: C0711BF1


Citations are not working.

2013-04-21 Thread John Kane
I seem to be rapidly losing any ability to work with LyX.  In the attached 
example I cannot get citations to work. I originally added the citations using 
the Lyz plug-in for Zotero but a quick and non-expert look at the bib file 
suggests it's okay and JabRef seems happy with it.

I obviously am doing something stupid but what?  

Or, have I really managed to muck up some settings on my system since my less 
than sucessful attempt to switch to biblatex?




Thanks.

LyX 2.0.5.1 on Ubuntu 12.10 , Tex Live 2012.20120611-4

april21.lyx
Description: application/lyx
0_ZHNGEKE6 0_IBAUQ38B

@article{anderegg2010expertcredibility,
	title = {Expert Credibility in Climate Change},
	issn = {0027-8424, 1091-6490},
	url = {http://www.pnas.org/content/early/2010/06/04/1003187107},
	doi = {10.1073/pnas.1003187107},
	abstract = {Although preliminary estimates from published literature and expert surveys suggest striking agreement among climate scientists on the tenets of anthropogenic climate change ({ACC)}, the American public expresses substantial doubt about both the anthropogenic cause and the level of scientific agreement underpinning {ACC.} A broad analysis of the climate scientist community itself, the distribution of credibility of dissenting researchers relative to agreeing researchers, and the level of agreement among top climate experts has not been conducted and would inform future {ACC} discussions. Here, we use an extensive dataset of 1,372 climate researchers and their publication and citation data to show that (i) 97{\textendash}98\% of the climate researchers most actively publishing in the field support the tenets of {ACC} outlined by the Intergovernmental Panel on Climate Change, and (ii) the relative climate expertise and scientific prominence of the researchers unconvinced of {ACC} are substantially below that of the convinced researchers.},
	language = {en},
	urldate = {2012-03-16},
	journal = {Proceedings of the National Academy of Sciences},
	author = {Anderegg, William R. L and Prall, James W and Harold, Jacob and Schneider, Stephen H},
	month = jun,
	year = {2010},
	keywords = {citation analyses, climate denier, expertise, publication analysis, scientific prominence},
	file = {Full Text PDF:/home/john/.mozilla/firefox/zsw2qavt.default/zotero/storage/WNRG99G7/Anderegg et al. - 2010 - Expert Credibility in Climate Change.pdf:application/pdf;Snapshot:/home/john/.mozilla/firefox/zsw2qavt.default/zotero/storage/7PKIH5F5/1003187107.html:text/html}
}

@article{acton1996bicycle,
	title = {Bicycle riding and oral/maxillofacial trauma in young children.},
	volume = {165},
	abstract = {{OBJECTIVES:} To investigate the frequency of oral/maxillofacial injuries in children who have had a bicycle incident and to relate this to the wearing of a protective helmet. {DESIGN:} Part of a larger prospective study in which self-administered questionnaires were completed by each child with bicycle-related injuries and their parents or caregivers. {SETTING:} Two tertiary-referral children's hospitals (between 1 April 1991 and 30 June 1992) and three general hospitals (between 1 August 1991 and 30 June 1992) in Brisbane. {PARTICIPANTS:} 813 children aged under 15 years who presented to the accident and emergency departments with bicycle-related injuries. {RESULTS:} There were 321 children (39.5\%) who sustained oral/maxillofacial injuries. Of 1355 injuries, 340 (25.1\%) were to the facial region. Of the 153 children admitted to hospital for bicycle-related injuries, 94 (61.4\%) had oral/maxillofacial injury as the primary reason for admission (including those with a reduced level of consciousness). Of the 66 children with a reduced level of consciousness, 53 had concomitant facial injuries. The most common oral/maxillofacial injuries were facial abrasions, cuts and lacerations (50.3\%); soft tissue injuries to the mouth (30.9\%); and dentoalveolar trauma (9.7\%). Over half of these children were wearing bicycle helmets. Of the 15 facial fractures (mandibular, nasal, and zygomatico-orbital), 10 were in children wearing helmets. {CONCLUSIONS:} Oral/maxillofacial injuries are frequent among child bicycle riders, even for those who wear Australian Standards-approved bicycle helmets. Bicycle helmets need design modifications (e.g., lightweight chin protectors) to more adequately protect the face and jaw.},
	number = {5},
	journal = {Medical Journal of Australia},
	author = {Acton, C. H. and Nixon, J. W. and Clark, R. C.},
	month = sep,
	year = {1996},
	keywords = {Adolescent; Alveolar Process; Bicycling; Child; Child, Non-{U.S.} Gov't; Skull Fractures; Soft Tissue Injuries; Tooth Injuries; Zygomatic Fractures, Pediatric; Humans; Male; Mandibular Fractures; Maxillofacial Injuries; Mouth; Nasal Bone; Orbital Fractures; Patient Admission; Prospective Studies; Queensland; Questionnaires; Research Support, Preschool; Consciousness; Facial Injuries; Female; Head Protective Devices; Hospitals},
	pages = {249{\textendash}251}
}

Re: Citations are not working.

2013-04-21 Thread Ray Rashif
On 21 April 2013 21:28, John Kane jrkrid...@yahoo.ca wrote:
 I seem to be rapidly losing any ability to work with LyX.  In the attached
 example I cannot get citations to work. I originally added the citations
 using the Lyz plug-in for Zotero but a quick and non-expert look at the bib
 file suggests it's okay and JabRef seems happy with it.

 I obviously am doing something stupid but what?

 Or, have I really managed to muck up some settings on my system since my
 less than sucessful attempt to switch to biblatex?

I am not able to reproduce any problem (you do not describe any).
Citations do appear and the (list of) references are there.

To start LyX afresh, here are the Linux-specific steps:

mv ~/.lyx ~/.lyx.bak
mv ~/.config/LyX ~/.config/LyX.bak

See if your citations are not working after that.

--
GPG/PGP ID: C0711BF1


Citations are not working.

2013-04-21 Thread John Kane
I seem to be rapidly losing any ability to work with LyX.  In the attached 
example I cannot get citations to work. I originally added the citations using 
the Lyz plug-in for Zotero but a quick and non-expert look at the bib file 
suggests it's okay and JabRef seems happy with it.

I obviously am doing something stupid but what?  

Or, have I really managed to muck up some settings on my system since my less 
than sucessful attempt to switch to biblatex?




Thanks.

LyX 2.0.5.1 on Ubuntu 12.10 , Tex Live 2012.20120611-4

april21.lyx
Description: application/lyx
0_ZHNGEKE6 0_IBAUQ38B

@article{anderegg2010expertcredibility,
	title = {Expert Credibility in Climate Change},
	issn = {0027-8424, 1091-6490},
	url = {http://www.pnas.org/content/early/2010/06/04/1003187107},
	doi = {10.1073/pnas.1003187107},
	abstract = {Although preliminary estimates from published literature and expert surveys suggest striking agreement among climate scientists on the tenets of anthropogenic climate change ({ACC)}, the American public expresses substantial doubt about both the anthropogenic cause and the level of scientific agreement underpinning {ACC.} A broad analysis of the climate scientist community itself, the distribution of credibility of dissenting researchers relative to agreeing researchers, and the level of agreement among top climate experts has not been conducted and would inform future {ACC} discussions. Here, we use an extensive dataset of 1,372 climate researchers and their publication and citation data to show that (i) 97{\textendash}98\% of the climate researchers most actively publishing in the field support the tenets of {ACC} outlined by the Intergovernmental Panel on Climate Change, and (ii) the relative climate expertise and scientific prominence of the researchers unconvinced of {ACC} are substantially below that of the convinced researchers.},
	language = {en},
	urldate = {2012-03-16},
	journal = {Proceedings of the National Academy of Sciences},
	author = {Anderegg, William R. L and Prall, James W and Harold, Jacob and Schneider, Stephen H},
	month = jun,
	year = {2010},
	keywords = {citation analyses, climate denier, expertise, publication analysis, scientific prominence},
	file = {Full Text PDF:/home/john/.mozilla/firefox/zsw2qavt.default/zotero/storage/WNRG99G7/Anderegg et al. - 2010 - Expert Credibility in Climate Change.pdf:application/pdf;Snapshot:/home/john/.mozilla/firefox/zsw2qavt.default/zotero/storage/7PKIH5F5/1003187107.html:text/html}
}

@article{acton1996bicycle,
	title = {Bicycle riding and oral/maxillofacial trauma in young children.},
	volume = {165},
	abstract = {{OBJECTIVES:} To investigate the frequency of oral/maxillofacial injuries in children who have had a bicycle incident and to relate this to the wearing of a protective helmet. {DESIGN:} Part of a larger prospective study in which self-administered questionnaires were completed by each child with bicycle-related injuries and their parents or caregivers. {SETTING:} Two tertiary-referral children's hospitals (between 1 April 1991 and 30 June 1992) and three general hospitals (between 1 August 1991 and 30 June 1992) in Brisbane. {PARTICIPANTS:} 813 children aged under 15 years who presented to the accident and emergency departments with bicycle-related injuries. {RESULTS:} There were 321 children (39.5\%) who sustained oral/maxillofacial injuries. Of 1355 injuries, 340 (25.1\%) were to the facial region. Of the 153 children admitted to hospital for bicycle-related injuries, 94 (61.4\%) had oral/maxillofacial injury as the primary reason for admission (including those with a reduced level of consciousness). Of the 66 children with a reduced level of consciousness, 53 had concomitant facial injuries. The most common oral/maxillofacial injuries were facial abrasions, cuts and lacerations (50.3\%); soft tissue injuries to the mouth (30.9\%); and dentoalveolar trauma (9.7\%). Over half of these children were wearing bicycle helmets. Of the 15 facial fractures (mandibular, nasal, and zygomatico-orbital), 10 were in children wearing helmets. {CONCLUSIONS:} Oral/maxillofacial injuries are frequent among child bicycle riders, even for those who wear Australian Standards-approved bicycle helmets. Bicycle helmets need design modifications (e.g., lightweight chin protectors) to more adequately protect the face and jaw.},
	number = {5},
	journal = {Medical Journal of Australia},
	author = {Acton, C. H. and Nixon, J. W. and Clark, R. C.},
	month = sep,
	year = {1996},
	keywords = {Adolescent; Alveolar Process; Bicycling; Child; Child, Non-{U.S.} Gov't; Skull Fractures; Soft Tissue Injuries; Tooth Injuries; Zygomatic Fractures, Pediatric; Humans; Male; Mandibular Fractures; Maxillofacial Injuries; Mouth; Nasal Bone; Orbital Fractures; Patient Admission; Prospective Studies; Queensland; Questionnaires; Research Support, Preschool; Consciousness; Facial Injuries; Female; Head Protective Devices; Hospitals},
	pages = {249{\textendash}251}
}

Re: Citations are not working.

2013-04-21 Thread Ray Rashif
On 21 April 2013 21:28, John Kane <jrkrid...@yahoo.ca> wrote:
> I seem to be rapidly losing any ability to work with LyX.  In the attached
> example I cannot get citations to work. I originally added the citations
> using the Lyz plug-in for Zotero but a quick and non-expert look at the bib
> file suggests it's okay and JabRef seems happy with it.
>
> I obviously am doing something stupid but what?
>
> Or, have I really managed to muck up some settings on my system since my
> less than sucessful attempt to switch to biblatex?

I am not able to reproduce any "problem" (you do not describe any).
Citations do appear and the (list of) references are there.

To start LyX afresh, here are the Linux-specific steps:

mv ~/.lyx ~/.lyx.bak
mv ~/.config/LyX ~/.config/LyX.bak

See if your citations are not working after that.

--
GPG/PGP ID: C0711BF1


Re: LyX 2.0.5 on OS X: citations appear on screen as if invalid

2012-11-14 Thread Dr Eberhard Lisse
Works fine with the paper I checked it on.

el

on 2012-11-13 20:19 Richard Heck said the following:
 On 11/13/2012 02:57 AM, Justin Wood wrote:
 Actually I've now noticed that many cross references appear as
 'BROKEN' when
 they are not. Rolled back to 2.0.4.

 This is pretty odd. I suspect a configuration problem of some kind. Try
 posting a complete message on this topic to lyx-devel.
 
 Richard
 
 




Re: LyX 2.0.5 on OS X: citations appear on screen as if invalid

2012-11-14 Thread Dr Eberhard Lisse
Works fine with the paper I checked it on.

el

on 2012-11-13 20:19 Richard Heck said the following:
 On 11/13/2012 02:57 AM, Justin Wood wrote:
 Actually I've now noticed that many cross references appear as
 'BROKEN' when
 they are not. Rolled back to 2.0.4.

 This is pretty odd. I suspect a configuration problem of some kind. Try
 posting a complete message on this topic to lyx-devel.
 
 Richard
 
 




Re: LyX 2.0.5 on OS X: citations appear on screen as if invalid

2012-11-14 Thread Dr Eberhard Lisse
Works fine with the paper I checked it on.

el

on 2012-11-13 20:19 Richard Heck said the following:
> On 11/13/2012 02:57 AM, Justin Wood wrote:
>> Actually I've now noticed that many cross references appear as
>> 'BROKEN' when
>> they are not. Rolled back to 2.0.4.
>>
> This is pretty odd. I suspect a configuration problem of some kind. Try
> posting a complete message on this topic to lyx-devel.
> 
> Richard
> 
> 




Re: LyX 2.0.5 on OS X: citations appear on screen as if invalid

2012-11-13 Thread Richard Heck

On 11/13/2012 02:57 AM, Justin Wood wrote:

Actually I've now noticed that many cross references appear as 'BROKEN' when
they are not. Rolled back to 2.0.4.

This is pretty odd. I suspect a configuration problem of some kind. Try 
posting a complete message on this topic to lyx-devel.


Richard



Re: LyX 2.0.5 on OS X: citations appear on screen as if invalid

2012-11-13 Thread Richard Heck

On 11/13/2012 02:57 AM, Justin Wood wrote:

Actually I've now noticed that many cross references appear as 'BROKEN' when
they are not. Rolled back to 2.0.4.

This is pretty odd. I suspect a configuration problem of some kind. Try 
posting a complete message on this topic to lyx-devel.


Richard



Re: LyX 2.0.5 on OS X: citations appear on screen as if invalid

2012-11-13 Thread Richard Heck

On 11/13/2012 02:57 AM, Justin Wood wrote:

Actually I've now noticed that many cross references appear as 'BROKEN' when
they are not. Rolled back to 2.0.4.

This is pretty odd. I suspect a configuration problem of some kind. Try 
posting a complete message on this topic to lyx-devel.


Richard



Re: LyX 2.0.5 on OS X: citations appear on screen as if invalid

2012-11-12 Thread Justin Wood
Actually I've now noticed that many cross references appear as 'BROKEN' when
they are not. Rolled back to 2.0.4.





Re: LyX 2.0.5 on OS X: citations appear on screen as if invalid

2012-11-12 Thread Justin Wood
Actually I've now noticed that many cross references appear as 'BROKEN' when
they are not. Rolled back to 2.0.4.





Re: LyX 2.0.5 on OS X: citations appear on screen as if invalid

2012-11-12 Thread Justin Wood
Actually I've now noticed that many cross references appear as 'BROKEN' when
they are not. Rolled back to 2.0.4.





Re: Inserting Citations

2012-06-19 Thread William Hanson
Ray,

I've solved the problem (not being able to insert citations or references),
thanks to the advice you gave in your June 15 message.

The key to the solution was getting to the important stuff that is buried
in Mendeley Desktop.  Under Tools  Options  Document Details, the
Citation Key must be checked, as you said.  And under under Tools  Options
 BibTeX, the right choices must be made, including the right path to the
location where Mendeley had stored my bib files, again as you said.

The foregoing was made harder than it otherwise would have been because my
version of Mendeley Desktop has no 'Tags' or 'Keywords'.  All the stuff I
needed to fiddle with was under Tools  Options.

Many thanks,

Bill



On Fri, Jun 15, 2012 at 2:39 PM, Ray Rashif schivmeis...@gmail.com wrote:

 On 15 June 2012 03:17, William Hanson whan...@umn.edu wrote:
  Ray,
 
 
  I'm trying to make progress by taking mini-steps.  In trying to execute
 one
  of your recommendations, I've hit a snag.  Recently you said:
 
  Choose an existing citation in your LyX document, note down its name
  as seen there. For eg., Michael1999. In Mendeley look for that
  specific bibliographic entry, as close as you can remember. Then find
  the field Citation Key. The two must match.
 
  By Mendeley you mean Mendeley Desktop, right?  In the LyX document I'm
  most concerned with I can find, e.g., the citation [Hanson2006]. And in
  Mendeley Desktop I can find the exact bibliographic entry to which this
  citation refers.  But I don't see any field called Citation Key in
  Mendeley Desktop.  So I'm stuck at this point.

 Both Mendeley Web and Desktop have a 'Citation Key' field. Otherwise,
 citations would have no unique identifier, and hence would not be
 usable in any application. In Web, it's Edit document details 
 Additional Fields.

 In Desktop, it's right below 'Tags' and 'Keywords'. If not, go to
 Options  Document Details and make sure 'Citation Key' is selected
 for every document type. It may be wise to make sure you're fully
 updated to the latest version of the program.

  But moving on just one more mini-step, you continue the passage quoted
 above
  as follows:
 
 
  If not, simply reselect the item in LyX bib dialogue from the
  Available Citations pane and delete the old citation from the
  Selected Citations pane
 
  But this is what I'm simply unable to do, because I can't find any way to
  get any file from my Mendeley Desktop into the Available Citations
 pane in
  LyX.  If only I could do that, I'm pretty sure I could solve my original
  problem, namely, getting all the :[?]s in the pdf replaced with real
  references.

 Look in Options  BibTeX. I personally have these checked:

 Escape LaTeX special characters
 Enable BibTeX syncing
 Create one BibTeX file per collection
 And a path where Mendeley will store the bib file(s)

 You may choose not to sync, in which case simply select a folder or
 the files you want and File  Export.


 --
 GPG/PGP ID: C0711BF1



Re: Inserting Citations

2012-06-19 Thread William Hanson
Ray,

I've solved the problem (not being able to insert citations or references),
thanks to the advice you gave in your June 15 message.

The key to the solution was getting to the important stuff that is buried
in Mendeley Desktop.  Under Tools  Options  Document Details, the
Citation Key must be checked, as you said.  And under under Tools  Options
 BibTeX, the right choices must be made, including the right path to the
location where Mendeley had stored my bib files, again as you said.

The foregoing was made harder than it otherwise would have been because my
version of Mendeley Desktop has no 'Tags' or 'Keywords'.  All the stuff I
needed to fiddle with was under Tools  Options.

Many thanks,

Bill



On Fri, Jun 15, 2012 at 2:39 PM, Ray Rashif schivmeis...@gmail.com wrote:

 On 15 June 2012 03:17, William Hanson whan...@umn.edu wrote:
  Ray,
 
 
  I'm trying to make progress by taking mini-steps.  In trying to execute
 one
  of your recommendations, I've hit a snag.  Recently you said:
 
  Choose an existing citation in your LyX document, note down its name
  as seen there. For eg., Michael1999. In Mendeley look for that
  specific bibliographic entry, as close as you can remember. Then find
  the field Citation Key. The two must match.
 
  By Mendeley you mean Mendeley Desktop, right?  In the LyX document I'm
  most concerned with I can find, e.g., the citation [Hanson2006]. And in
  Mendeley Desktop I can find the exact bibliographic entry to which this
  citation refers.  But I don't see any field called Citation Key in
  Mendeley Desktop.  So I'm stuck at this point.

 Both Mendeley Web and Desktop have a 'Citation Key' field. Otherwise,
 citations would have no unique identifier, and hence would not be
 usable in any application. In Web, it's Edit document details 
 Additional Fields.

 In Desktop, it's right below 'Tags' and 'Keywords'. If not, go to
 Options  Document Details and make sure 'Citation Key' is selected
 for every document type. It may be wise to make sure you're fully
 updated to the latest version of the program.

  But moving on just one more mini-step, you continue the passage quoted
 above
  as follows:
 
 
  If not, simply reselect the item in LyX bib dialogue from the
  Available Citations pane and delete the old citation from the
  Selected Citations pane
 
  But this is what I'm simply unable to do, because I can't find any way to
  get any file from my Mendeley Desktop into the Available Citations
 pane in
  LyX.  If only I could do that, I'm pretty sure I could solve my original
  problem, namely, getting all the :[?]s in the pdf replaced with real
  references.

 Look in Options  BibTeX. I personally have these checked:

 Escape LaTeX special characters
 Enable BibTeX syncing
 Create one BibTeX file per collection
 And a path where Mendeley will store the bib file(s)

 You may choose not to sync, in which case simply select a folder or
 the files you want and File  Export.


 --
 GPG/PGP ID: C0711BF1



Re: Inserting Citations

2012-06-19 Thread William Hanson
Ray,

I've solved the problem (not being able to insert citations or references),
thanks to the advice you gave in your June 15 message.

The key to the solution was getting to the important stuff that is buried
in Mendeley Desktop.  Under Tools > Options > Document Details, the
Citation Key must be checked, as you said.  And under under Tools > Options
> BibTeX, the right choices must be made, including the right path to the
location where Mendeley had stored my bib files, again as you said.

The foregoing was made harder than it otherwise would have been because my
version of Mendeley Desktop has no 'Tags' or 'Keywords'.  All the stuff I
needed to fiddle with was under Tools > Options.

Many thanks,

Bill



On Fri, Jun 15, 2012 at 2:39 PM, Ray Rashif <schivmeis...@gmail.com> wrote:

> On 15 June 2012 03:17, William Hanson <whan...@umn.edu> wrote:
> > Ray,
> >
> >
> > I'm trying to make progress by taking mini-steps.  In trying to execute
> one
> > of your recommendations, I've hit a snag.  Recently you said:
> >
> > "Choose an existing citation in your LyX document, note down its name
> > as seen there. For eg., "Michael1999". In Mendeley look for that
> > specific bibliographic entry, as close as you can remember. Then find
> > the field "Citation Key". The two must match."
> >
> > By "Mendeley" you mean Mendeley Desktop, right?  In the LyX document I'm
> > most concerned with I can find, e.g., the citation "[Hanson2006]". And in
> > Mendeley Desktop I can find the exact bibliographic entry to which this
> > citation refers.  But I don't see any field called "Citation Key" in
> > Mendeley Desktop.  So I'm stuck at this point.
>
> Both Mendeley Web and Desktop have a 'Citation Key' field. Otherwise,
> citations would have no unique identifier, and hence would not be
> usable in any application. In Web, it's Edit document details >
> Additional Fields.
>
> In Desktop, it's right below 'Tags' and 'Keywords'. If not, go to
> Options > Document Details and make sure 'Citation Key' is selected
> for every document type. It may be wise to make sure you're fully
> updated to the latest version of the program.
>
> > But moving on just one more mini-step, you continue the passage quoted
> above
> > as follows:
> >
> >
> > "If not, simply reselect the item in LyX bib dialogue from the
> > "Available Citations" pane and delete the old citation from the
> > "Selected Citations" pane"
> >
> > But this is what I'm simply unable to do, because I can't find any way to
> > get any file from my Mendeley Desktop into the "Available Citations"
> pane in
> > LyX.  If only I could do that, I'm pretty sure I could solve my original
> > problem, namely, getting all the :"[?]"s in the pdf replaced with real
> > references.
>
> Look in Options > BibTeX. I personally have these checked:
>
> Escape LaTeX special characters
> Enable BibTeX syncing
> Create one BibTeX file per collection
> And a path where Mendeley will store the bib file(s)
>
> You may choose not to sync, in which case simply select a folder or
> the files you want and File > Export.
>
>
> --
> GPG/PGP ID: C0711BF1
>


Re: Inserting Citations

2012-06-15 Thread Ray Rashif
On 15 June 2012 03:17, William Hanson whan...@umn.edu wrote:
 Ray,


 I'm trying to make progress by taking mini-steps.  In trying to execute one
 of your recommendations, I've hit a snag.  Recently you said:

 Choose an existing citation in your LyX document, note down its name
 as seen there. For eg., Michael1999. In Mendeley look for that
 specific bibliographic entry, as close as you can remember. Then find
 the field Citation Key. The two must match.

 By Mendeley you mean Mendeley Desktop, right?  In the LyX document I'm
 most concerned with I can find, e.g., the citation [Hanson2006]. And in
 Mendeley Desktop I can find the exact bibliographic entry to which this
 citation refers.  But I don't see any field called Citation Key in
 Mendeley Desktop.  So I'm stuck at this point.

Both Mendeley Web and Desktop have a 'Citation Key' field. Otherwise,
citations would have no unique identifier, and hence would not be
usable in any application. In Web, it's Edit document details 
Additional Fields.

In Desktop, it's right below 'Tags' and 'Keywords'. If not, go to
Options  Document Details and make sure 'Citation Key' is selected
for every document type. It may be wise to make sure you're fully
updated to the latest version of the program.

 But moving on just one more mini-step, you continue the passage quoted above
 as follows:


 If not, simply reselect the item in LyX bib dialogue from the
 Available Citations pane and delete the old citation from the
 Selected Citations pane

 But this is what I'm simply unable to do, because I can't find any way to
 get any file from my Mendeley Desktop into the Available Citations pane in
 LyX.  If only I could do that, I'm pretty sure I could solve my original
 problem, namely, getting all the :[?]s in the pdf replaced with real
 references.

Look in Options  BibTeX. I personally have these checked:

Escape LaTeX special characters
Enable BibTeX syncing
Create one BibTeX file per collection
And a path where Mendeley will store the bib file(s)

You may choose not to sync, in which case simply select a folder or
the files you want and File  Export.


--
GPG/PGP ID: C0711BF1


Re: Inserting Citations

2012-06-15 Thread Ray Rashif
On 15 June 2012 03:17, William Hanson whan...@umn.edu wrote:
 Ray,


 I'm trying to make progress by taking mini-steps.  In trying to execute one
 of your recommendations, I've hit a snag.  Recently you said:

 Choose an existing citation in your LyX document, note down its name
 as seen there. For eg., Michael1999. In Mendeley look for that
 specific bibliographic entry, as close as you can remember. Then find
 the field Citation Key. The two must match.

 By Mendeley you mean Mendeley Desktop, right?  In the LyX document I'm
 most concerned with I can find, e.g., the citation [Hanson2006]. And in
 Mendeley Desktop I can find the exact bibliographic entry to which this
 citation refers.  But I don't see any field called Citation Key in
 Mendeley Desktop.  So I'm stuck at this point.

Both Mendeley Web and Desktop have a 'Citation Key' field. Otherwise,
citations would have no unique identifier, and hence would not be
usable in any application. In Web, it's Edit document details 
Additional Fields.

In Desktop, it's right below 'Tags' and 'Keywords'. If not, go to
Options  Document Details and make sure 'Citation Key' is selected
for every document type. It may be wise to make sure you're fully
updated to the latest version of the program.

 But moving on just one more mini-step, you continue the passage quoted above
 as follows:


 If not, simply reselect the item in LyX bib dialogue from the
 Available Citations pane and delete the old citation from the
 Selected Citations pane

 But this is what I'm simply unable to do, because I can't find any way to
 get any file from my Mendeley Desktop into the Available Citations pane in
 LyX.  If only I could do that, I'm pretty sure I could solve my original
 problem, namely, getting all the :[?]s in the pdf replaced with real
 references.

Look in Options  BibTeX. I personally have these checked:

Escape LaTeX special characters
Enable BibTeX syncing
Create one BibTeX file per collection
And a path where Mendeley will store the bib file(s)

You may choose not to sync, in which case simply select a folder or
the files you want and File  Export.


--
GPG/PGP ID: C0711BF1


Re: Inserting Citations

2012-06-15 Thread Ray Rashif
On 15 June 2012 03:17, William Hanson <whan...@umn.edu> wrote:
> Ray,
>
>
> I'm trying to make progress by taking mini-steps.  In trying to execute one
> of your recommendations, I've hit a snag.  Recently you said:
>
> "Choose an existing citation in your LyX document, note down its name
> as seen there. For eg., "Michael1999". In Mendeley look for that
> specific bibliographic entry, as close as you can remember. Then find
> the field "Citation Key". The two must match."
>
> By "Mendeley" you mean Mendeley Desktop, right?  In the LyX document I'm
> most concerned with I can find, e.g., the citation "[Hanson2006]". And in
> Mendeley Desktop I can find the exact bibliographic entry to which this
> citation refers.  But I don't see any field called "Citation Key" in
> Mendeley Desktop.  So I'm stuck at this point.

Both Mendeley Web and Desktop have a 'Citation Key' field. Otherwise,
citations would have no unique identifier, and hence would not be
usable in any application. In Web, it's Edit document details >
Additional Fields.

In Desktop, it's right below 'Tags' and 'Keywords'. If not, go to
Options > Document Details and make sure 'Citation Key' is selected
for every document type. It may be wise to make sure you're fully
updated to the latest version of the program.

> But moving on just one more mini-step, you continue the passage quoted above
> as follows:
>
>
> "If not, simply reselect the item in LyX bib dialogue from the
> "Available Citations" pane and delete the old citation from the
> "Selected Citations" pane"
>
> But this is what I'm simply unable to do, because I can't find any way to
> get any file from my Mendeley Desktop into the "Available Citations" pane in
> LyX.  If only I could do that, I'm pretty sure I could solve my original
> problem, namely, getting all the :"[?]"s in the pdf replaced with real
> references.

Look in Options > BibTeX. I personally have these checked:

Escape LaTeX special characters
Enable BibTeX syncing
Create one BibTeX file per collection
And a path where Mendeley will store the bib file(s)

You may choose not to sync, in which case simply select a folder or
the files you want and File > Export.


--
GPG/PGP ID: C0711BF1


Re: Inserting Citations

2012-06-14 Thread Ray Rashif
On 14 June 2012 11:27, William Hanson whan...@umn.edu wrote:
 Ray,

 Thanks for your careful and detailed response.  Here are my answers to your
 1-4.

 1.  Yes, I had gathered as much.

 2.  I was not limited in the number of .bib files I could add when running
 LyX on my old computer.  But you're right.  This is minor and can wait.

 3.  Yes, this is not an issue.

 4.  No, I'm not dealing with  master-child documents.

Your main problem therefore are citations that appear with a question
mark (?). Correct?

1. The bib file you used on the old computer must be the same on the
new one. Is it? Can you guarantee so? You may want to use a checksum
utility [1] to verify that they both have the same checksums. Chances
are they are not, and if so, proceed to (2).

 NEW INFORMATION:  I now realize that the .bib file I used (on my old
 computer) for the most important of my old papers is in my Mendeley desktop
 on the new computer but not in my BibTeX folder. Yet I can't figure out how
 to move it to the BibTeX folder.  A Windows Explorer search of all my
 documents does not find it, and the Mendeley Desktop doesn't seem to have
 any way to move it.

The bottom line is that the keys in the LyX document must match the
keys in the '.bib' file(s). Mendeley here is a third-party, and all it
does is generate the BibTeX file for you when asked. If what you do is
select the bib file directly from the folder Mendeley exports to,
chances are that you're selecting a new version where in turn chances
are high that keys are not the same as before.

2. Open up _all_ the bib files with a text editor. Search for a known
author, which you have cited in one of your documents but appears as a
'?'. The key is right next to the first curly brace '{'. This key and
the key LyX shows you for that particular citation must match.
Otherwise, you've run into a mismatch. Proceed to (3).

If you're curious, you can manually change the key in the bib file to
match the one known to LyX. Then preview the document, the citation
should now be visible.

3.  Check your Mendeley Desktop settings for where it stores the bib
file. Copy that file into your working directory (where your relevant
LyX files are for this particular document or set of documents).
Update your LyX files now by re-selecting every broken citation.

It is best to not load in LyX bib files that are generated by a
third-party application with no LyX integration, because it may be
overwritten. Mendeley Desktop, for the record, overwrites exported
(bib) files. That's why there's a big thin warning at the top of the
file.

Personally, I prefer to do away with any kind of integration even when
my final step involves KBibTeX (which does support LyX). I always keep
my bib files separate from what's generating them, and they reside
standalone among the related LyX/LaTeX documents. When there are
changes I simply replace them and update my documents accordingly.


--
GPG/PGP ID: C0711BF1


Re: Inserting Citations

2012-06-14 Thread William Hanson
Ray,

I'm trying to make progress by taking mini-steps.  In trying to execute one
of your recommendations, I've hit a snag.  Recently you said:

Choose an existing citation in your LyX document, note down its name
as seen there. For eg., Michael1999. In Mendeley look for that
specific bibliographic entry, as close as you can remember. Then find
the field Citation Key. The two must match.

By Mendeley you mean Mendeley Desktop, right?  In the LyX document I'm
most concerned with I can find, e.g., the citation [Hanson2006]. And in
Mendeley Desktop I can find the exact bibliographic entry to which this
citation refers.  But I don't see any field called Citation Key in
Mendeley Desktop.  So I'm stuck at this point.

But moving on just one more mini-step, you continue the passage quoted
above as follows:

If not, simply reselect the item in LyX bib dialogue from the
Available Citations pane and delete the old citation from the
Selected Citations pane

But this is what I'm simply unable to do, because I can't find any way to
get any file from my Mendeley Desktop into the Available Citations pane
in LyX.  If only I could do that, I'm pretty sure I could solve my original
problem, namely, getting all the :[?]s in the pdf replaced with real
references.

Bill



On Thu, Jun 14, 2012 at 9:52 AM, Ray Rashif schivmeis...@gmail.com wrote:

 On 14 June 2012 11:27, William Hanson whan...@umn.edu wrote:
  Ray,
 
  Thanks for your careful and detailed response.  Here are my answers to
 your
  1-4.
 
  1.  Yes, I had gathered as much.
 
  2.  I was not limited in the number of .bib files I could add when
 running
  LyX on my old computer.  But you're right.  This is minor and can wait.
 
  3.  Yes, this is not an issue.
 
  4.  No, I'm not dealing with  master-child documents.

 Your main problem therefore are citations that appear with a question
 mark (?). Correct?

 1. The bib file you used on the old computer must be the same on the
 new one. Is it? Can you guarantee so? You may want to use a checksum
 utility [1] to verify that they both have the same checksums. Chances
 are they are not, and if so, proceed to (2).

  NEW INFORMATION:  I now realize that the .bib file I used (on my old
  computer) for the most important of my old papers is in my Mendeley
 desktop
  on the new computer but not in my BibTeX folder. Yet I can't figure out
 how
  to move it to the BibTeX folder.  A Windows Explorer search of all my
  documents does not find it, and the Mendeley Desktop doesn't seem to have
  any way to move it.

 The bottom line is that the keys in the LyX document must match the
 keys in the '.bib' file(s). Mendeley here is a third-party, and all it
 does is generate the BibTeX file for you when asked. If what you do is
 select the bib file directly from the folder Mendeley exports to,
 chances are that you're selecting a new version where in turn chances
 are high that keys are not the same as before.

 2. Open up _all_ the bib files with a text editor. Search for a known
 author, which you have cited in one of your documents but appears as a
 '?'. The key is right next to the first curly brace '{'. This key and
 the key LyX shows you for that particular citation must match.
 Otherwise, you've run into a mismatch. Proceed to (3).

 If you're curious, you can manually change the key in the bib file to
 match the one known to LyX. Then preview the document, the citation
 should now be visible.

 3.  Check your Mendeley Desktop settings for where it stores the bib
 file. Copy that file into your working directory (where your relevant
 LyX files are for this particular document or set of documents).
 Update your LyX files now by re-selecting every broken citation.

 It is best to not load in LyX bib files that are generated by a
 third-party application with no LyX integration, because it may be
 overwritten. Mendeley Desktop, for the record, overwrites exported
 (bib) files. That's why there's a big thin warning at the top of the
 file.

 Personally, I prefer to do away with any kind of integration even when
 my final step involves KBibTeX (which does support LyX). I always keep
 my bib files separate from what's generating them, and they reside
 standalone among the related LyX/LaTeX documents. When there are
 changes I simply replace them and update my documents accordingly.


 --
 GPG/PGP ID: C0711BF1



Re: Inserting Citations

2012-06-14 Thread Ray Rashif
On 14 June 2012 11:27, William Hanson whan...@umn.edu wrote:
 Ray,

 Thanks for your careful and detailed response.  Here are my answers to your
 1-4.

 1.  Yes, I had gathered as much.

 2.  I was not limited in the number of .bib files I could add when running
 LyX on my old computer.  But you're right.  This is minor and can wait.

 3.  Yes, this is not an issue.

 4.  No, I'm not dealing with  master-child documents.

Your main problem therefore are citations that appear with a question
mark (?). Correct?

1. The bib file you used on the old computer must be the same on the
new one. Is it? Can you guarantee so? You may want to use a checksum
utility [1] to verify that they both have the same checksums. Chances
are they are not, and if so, proceed to (2).

 NEW INFORMATION:  I now realize that the .bib file I used (on my old
 computer) for the most important of my old papers is in my Mendeley desktop
 on the new computer but not in my BibTeX folder. Yet I can't figure out how
 to move it to the BibTeX folder.  A Windows Explorer search of all my
 documents does not find it, and the Mendeley Desktop doesn't seem to have
 any way to move it.

The bottom line is that the keys in the LyX document must match the
keys in the '.bib' file(s). Mendeley here is a third-party, and all it
does is generate the BibTeX file for you when asked. If what you do is
select the bib file directly from the folder Mendeley exports to,
chances are that you're selecting a new version where in turn chances
are high that keys are not the same as before.

2. Open up _all_ the bib files with a text editor. Search for a known
author, which you have cited in one of your documents but appears as a
'?'. The key is right next to the first curly brace '{'. This key and
the key LyX shows you for that particular citation must match.
Otherwise, you've run into a mismatch. Proceed to (3).

If you're curious, you can manually change the key in the bib file to
match the one known to LyX. Then preview the document, the citation
should now be visible.

3.  Check your Mendeley Desktop settings for where it stores the bib
file. Copy that file into your working directory (where your relevant
LyX files are for this particular document or set of documents).
Update your LyX files now by re-selecting every broken citation.

It is best to not load in LyX bib files that are generated by a
third-party application with no LyX integration, because it may be
overwritten. Mendeley Desktop, for the record, overwrites exported
(bib) files. That's why there's a big thin warning at the top of the
file.

Personally, I prefer to do away with any kind of integration even when
my final step involves KBibTeX (which does support LyX). I always keep
my bib files separate from what's generating them, and they reside
standalone among the related LyX/LaTeX documents. When there are
changes I simply replace them and update my documents accordingly.


--
GPG/PGP ID: C0711BF1


Re: Inserting Citations

2012-06-14 Thread William Hanson
Ray,

I'm trying to make progress by taking mini-steps.  In trying to execute one
of your recommendations, I've hit a snag.  Recently you said:

Choose an existing citation in your LyX document, note down its name
as seen there. For eg., Michael1999. In Mendeley look for that
specific bibliographic entry, as close as you can remember. Then find
the field Citation Key. The two must match.

By Mendeley you mean Mendeley Desktop, right?  In the LyX document I'm
most concerned with I can find, e.g., the citation [Hanson2006]. And in
Mendeley Desktop I can find the exact bibliographic entry to which this
citation refers.  But I don't see any field called Citation Key in
Mendeley Desktop.  So I'm stuck at this point.

But moving on just one more mini-step, you continue the passage quoted
above as follows:

If not, simply reselect the item in LyX bib dialogue from the
Available Citations pane and delete the old citation from the
Selected Citations pane

But this is what I'm simply unable to do, because I can't find any way to
get any file from my Mendeley Desktop into the Available Citations pane
in LyX.  If only I could do that, I'm pretty sure I could solve my original
problem, namely, getting all the :[?]s in the pdf replaced with real
references.

Bill



On Thu, Jun 14, 2012 at 9:52 AM, Ray Rashif schivmeis...@gmail.com wrote:

 On 14 June 2012 11:27, William Hanson whan...@umn.edu wrote:
  Ray,
 
  Thanks for your careful and detailed response.  Here are my answers to
 your
  1-4.
 
  1.  Yes, I had gathered as much.
 
  2.  I was not limited in the number of .bib files I could add when
 running
  LyX on my old computer.  But you're right.  This is minor and can wait.
 
  3.  Yes, this is not an issue.
 
  4.  No, I'm not dealing with  master-child documents.

 Your main problem therefore are citations that appear with a question
 mark (?). Correct?

 1. The bib file you used on the old computer must be the same on the
 new one. Is it? Can you guarantee so? You may want to use a checksum
 utility [1] to verify that they both have the same checksums. Chances
 are they are not, and if so, proceed to (2).

  NEW INFORMATION:  I now realize that the .bib file I used (on my old
  computer) for the most important of my old papers is in my Mendeley
 desktop
  on the new computer but not in my BibTeX folder. Yet I can't figure out
 how
  to move it to the BibTeX folder.  A Windows Explorer search of all my
  documents does not find it, and the Mendeley Desktop doesn't seem to have
  any way to move it.

 The bottom line is that the keys in the LyX document must match the
 keys in the '.bib' file(s). Mendeley here is a third-party, and all it
 does is generate the BibTeX file for you when asked. If what you do is
 select the bib file directly from the folder Mendeley exports to,
 chances are that you're selecting a new version where in turn chances
 are high that keys are not the same as before.

 2. Open up _all_ the bib files with a text editor. Search for a known
 author, which you have cited in one of your documents but appears as a
 '?'. The key is right next to the first curly brace '{'. This key and
 the key LyX shows you for that particular citation must match.
 Otherwise, you've run into a mismatch. Proceed to (3).

 If you're curious, you can manually change the key in the bib file to
 match the one known to LyX. Then preview the document, the citation
 should now be visible.

 3.  Check your Mendeley Desktop settings for where it stores the bib
 file. Copy that file into your working directory (where your relevant
 LyX files are for this particular document or set of documents).
 Update your LyX files now by re-selecting every broken citation.

 It is best to not load in LyX bib files that are generated by a
 third-party application with no LyX integration, because it may be
 overwritten. Mendeley Desktop, for the record, overwrites exported
 (bib) files. That's why there's a big thin warning at the top of the
 file.

 Personally, I prefer to do away with any kind of integration even when
 my final step involves KBibTeX (which does support LyX). I always keep
 my bib files separate from what's generating them, and they reside
 standalone among the related LyX/LaTeX documents. When there are
 changes I simply replace them and update my documents accordingly.


 --
 GPG/PGP ID: C0711BF1



Re: Inserting Citations

2012-06-14 Thread Ray Rashif
On 14 June 2012 11:27, William Hanson <whan...@umn.edu> wrote:
> Ray,
>
> Thanks for your careful and detailed response.  Here are my answers to your
> 1-4.
>
> 1.  Yes, I had gathered as much.
>
> 2.  I was not limited in the number of .bib files I could add when running
> LyX on my old computer.  But you're right.  This is minor and can wait.
>
> 3.  Yes, this is not an issue.
>
> 4.  No, I'm not dealing with  master-child documents.

Your main problem therefore are citations that appear with a question
mark (?). Correct?

1. The bib file you used on the old computer must be the same on the
new one. Is it? Can you guarantee so? You may want to use a checksum
utility [1] to verify that they both have the same checksums. Chances
are they are not, and if so, proceed to (2).

> NEW INFORMATION:  I now realize that the .bib file I used (on my old
> computer) for the most important of my old papers is in my Mendeley desktop
> on the new computer but not in my BibTeX folder. Yet I can't figure out how
> to move it to the BibTeX folder.  A Windows Explorer search of all my
> documents does not find it, and the Mendeley Desktop doesn't seem to have
> any way to move it.

The bottom line is that the keys in the LyX document must match the
keys in the '.bib' file(s). Mendeley here is a third-party, and all it
does is generate the BibTeX file for you when asked. If what you do is
select the bib file directly from the folder Mendeley exports to,
chances are that you're selecting a new version where in turn chances
are high that keys are not the same as before.

2. Open up _all_ the bib files with a text editor. Search for a known
author, which you have cited in one of your documents but appears as a
'?'. The key is right next to the first curly brace '{'. This key and
the key LyX shows you for that particular citation must match.
Otherwise, you've run into a mismatch. Proceed to (3).

If you're curious, you can manually change the key in the bib file to
match the one known to LyX. Then preview the document, the citation
should now be visible.

3.  Check your Mendeley Desktop settings for where it stores the bib
file. Copy that file into your working directory (where your relevant
LyX files are for this particular document or set of documents).
Update your LyX files now by re-selecting every broken citation.

It is best to not load in LyX bib files that are generated by a
third-party application with no LyX integration, because it may be
overwritten. Mendeley Desktop, for the record, overwrites exported
(bib) files. That's why there's a big thin warning at the top of the
file.

Personally, I prefer to do away with any kind of integration even when
my final step involves KBibTeX (which does support LyX). I always keep
my bib files separate from what's generating them, and they reside
standalone among the related LyX/LaTeX documents. When there are
changes I simply replace them and update my documents accordingly.


--
GPG/PGP ID: C0711BF1


Re: Inserting Citations

2012-06-14 Thread William Hanson
Ray,

I'm trying to make progress by taking mini-steps.  In trying to execute one
of your recommendations, I've hit a snag.  Recently you said:

"Choose an existing citation in your LyX document, note down its name
as seen there. For eg., "Michael1999". In Mendeley look for that
specific bibliographic entry, as close as you can remember. Then find
the field "Citation Key". The two must match."

By "Mendeley" you mean Mendeley Desktop, right?  In the LyX document I'm
most concerned with I can find, e.g., the citation "[Hanson2006]". And in
Mendeley Desktop I can find the exact bibliographic entry to which this
citation refers.  But I don't see any field called "Citation Key" in
Mendeley Desktop.  So I'm stuck at this point.

But moving on just one more mini-step, you continue the passage quoted
above as follows:

"If not, simply reselect the item in LyX bib dialogue from the
"Available Citations" pane and delete the old citation from the
"Selected Citations" pane"

But this is what I'm simply unable to do, because I can't find any way to
get any file from my Mendeley Desktop into the "Available Citations" pane
in LyX.  If only I could do that, I'm pretty sure I could solve my original
problem, namely, getting all the :"[?]"s in the pdf replaced with real
references.

Bill



On Thu, Jun 14, 2012 at 9:52 AM, Ray Rashif <schivmeis...@gmail.com> wrote:

> On 14 June 2012 11:27, William Hanson <whan...@umn.edu> wrote:
> > Ray,
> >
> > Thanks for your careful and detailed response.  Here are my answers to
> your
> > 1-4.
> >
> > 1.  Yes, I had gathered as much.
> >
> > 2.  I was not limited in the number of .bib files I could add when
> running
> > LyX on my old computer.  But you're right.  This is minor and can wait.
> >
> > 3.  Yes, this is not an issue.
> >
> > 4.  No, I'm not dealing with  master-child documents.
>
> Your main problem therefore are citations that appear with a question
> mark (?). Correct?
>
> 1. The bib file you used on the old computer must be the same on the
> new one. Is it? Can you guarantee so? You may want to use a checksum
> utility [1] to verify that they both have the same checksums. Chances
> are they are not, and if so, proceed to (2).
>
> > NEW INFORMATION:  I now realize that the .bib file I used (on my old
> > computer) for the most important of my old papers is in my Mendeley
> desktop
> > on the new computer but not in my BibTeX folder. Yet I can't figure out
> how
> > to move it to the BibTeX folder.  A Windows Explorer search of all my
> > documents does not find it, and the Mendeley Desktop doesn't seem to have
> > any way to move it.
>
> The bottom line is that the keys in the LyX document must match the
> keys in the '.bib' file(s). Mendeley here is a third-party, and all it
> does is generate the BibTeX file for you when asked. If what you do is
> select the bib file directly from the folder Mendeley exports to,
> chances are that you're selecting a new version where in turn chances
> are high that keys are not the same as before.
>
> 2. Open up _all_ the bib files with a text editor. Search for a known
> author, which you have cited in one of your documents but appears as a
> '?'. The key is right next to the first curly brace '{'. This key and
> the key LyX shows you for that particular citation must match.
> Otherwise, you've run into a mismatch. Proceed to (3).
>
> If you're curious, you can manually change the key in the bib file to
> match the one known to LyX. Then preview the document, the citation
> should now be visible.
>
> 3.  Check your Mendeley Desktop settings for where it stores the bib
> file. Copy that file into your working directory (where your relevant
> LyX files are for this particular document or set of documents).
> Update your LyX files now by re-selecting every broken citation.
>
> It is best to not load in LyX bib files that are generated by a
> third-party application with no LyX integration, because it may be
> overwritten. Mendeley Desktop, for the record, overwrites exported
> (bib) files. That's why there's a big thin warning at the top of the
> file.
>
> Personally, I prefer to do away with any kind of integration even when
> my final step involves KBibTeX (which does support LyX). I always keep
> my bib files separate from what's generating them, and they reside
> standalone among the related LyX/LaTeX documents. When there are
> changes I simply replace them and update my documents accordingly.
>
>
> --
> GPG/PGP ID: C0711BF1
>


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