Hi,
On Sat, Jun 25, 2011 at 12:22 AM, Wes McKinney wesmck...@gmail.com wrote:
...
Perhaps we should make a wiki page someplace summarizing pros and cons
of the various implementation approaches?
But - we should do this if it really is an open question which one we
go for. If not then, we're
Hi,
On Wed, May 4, 2011 at 9:24 AM, Robert Kern robert.k...@gmail.com wrote:
On Wed, May 4, 2011 at 11:14, Matthew Brett matthew.br...@gmail.com wrote:
Hi,
On Tue, May 3, 2011 at 7:58 PM, Robert Kern robert.k...@gmail.com wrote:
I can't speak for the rest of the group, but as for myself
Hi,
On Thu, May 26, 2011 at 9:32 PM, Pearu Peterson
pearu.peter...@gmail.com wrote:
Hi,
Would it be possible to setup a signing system where anyone who would like
to support Clint could sign and advertise the system on relevant mailing
lists?
This would provide larger body of supporters for
Oh sorry and:
On Thu, May 26, 2011 at 2:03 PM, Matthew Brett matthew.br...@gmail.com wrote:
Hi,
On Wed, May 4, 2011 at 9:24 AM, Robert Kern robert.k...@gmail.com wrote:
On Wed, May 4, 2011 at 11:14, Matthew Brett matthew.br...@gmail.com wrote:
Hi,
On Tue, May 3, 2011 at 7:58 PM, Robert
Hi,
On Tue, May 3, 2011 at 7:58 PM, Robert Kern robert.k...@gmail.com wrote:
On Tue, May 3, 2011 at 12:07, Matthew Brett matthew.br...@gmail.com wrote:
Hi,
On Sat, Apr 30, 2011 at 5:21 AM, Ralf Gommers
ralf.gomm...@googlemail.com wrote:
On Wed, Apr 27, 2011 at 8:52 PM, Matthew Brett
Hi,
I can imagine that this is low-priority, but I have just been enjoying
pytox for automated virtualenv testing:
http://codespeak.net/tox/index.html
which revealed that numpy download-build-install via easy_install
(distribute) fails with the appended traceback ending in ValueError:
Hi,
On Wed, May 4, 2011 at 1:23 PM, Ralf Gommers
ralf.gomm...@googlemail.com wrote:
On Wed, May 4, 2011 at 6:53 PM, Matthew Brett matthew.br...@gmail.com
wrote:
Hi,
I can imagine that this is low-priority, but I have just been enjoying
pytox for automated virtualenv testing:
http
Hi,
On Sat, Apr 30, 2011 at 5:21 AM, Ralf Gommers
ralf.gomm...@googlemail.com wrote:
On Wed, Apr 27, 2011 at 8:52 PM, Matthew Brett matthew.br...@gmail.com
wrote:
Hi,
This is just to follow up on a dead thread of mine a little while back.
I was asking about letters for Clint Whaley's
Hi,
This is just to follow up on a dead thread of mine a little while back.
I was asking about letters for Clint Whaley's tenure case, from numpy,
but I realized that I don't know who 'numpy' is :)
Is there in fact a numpy steering group?Who is best to write
letters representing the 'numpy
Hi,
I'm on the ATLAS mailing list, maybe some of y'all are too. Clint
Whaley, the author of ATLAS, was asking for letters to support his
tenure case. That is, letters saying that lots of us benefit greatly
from his work - which is obviously true.
Can we the numpy community produce such a
Hi,
On Wed, Apr 20, 2011 at 10:45 PM, Gael Varoquaux
gael.varoqu...@normalesup.org wrote:
On Thu, Apr 21, 2011 at 07:25:18AM +0530, pratik wrote:
If the place where he is seeking tenure does not know his name (i.e
hasn't heard of ATLAS) then it is not a good place to seek tenure in :) .
Hi,
On Wed, Apr 20, 2011 at 6:55 PM, pratik pratik.mal...@gmail.com wrote:
On Wednesday 20 April 2011 10:57 PM, Matthew Brett wrote:
Hi,
I'm on the ATLAS mailing list, maybe some of y'all are too. Clint
Whaley, the author of ATLAS, was asking for letters to support his
tenure case
Hi,
On Tue, Apr 5, 2011 at 10:56 AM, Charles R Harris
charlesr.har...@gmail.com wrote:
On Tue, Apr 5, 2011 at 11:45 AM, josef.p...@gmail.com wrote:
On Tue, Apr 5, 2011 at 1:20 PM, Charles R Harris
charlesr.har...@gmail.com wrote:
On Tue, Apr 5, 2011 at 10:46 AM, Christopher Barker
Hi,
On Tue, Apr 5, 2011 at 9:46 AM, Christopher Barker
chris.bar...@noaa.gov wrote:
On 4/4/11 10:35 PM, Charles R Harris wrote:
IIUC, Ub is undefined -- U means universal newlines, which makes no
sense when used with b for binary. I looked at the code a ways back,
and I can't
Hi,
On Tue, Apr 5, 2011 at 4:12 PM, Christopher Barker
chris.bar...@noaa.gov wrote:
On 4/5/11 3:36 PM, josef.p...@gmail.com wrote:
I disagree that U makes no sense for binary file reading.
I wasn't saying that it made no sense to have a U mode for binary file
reading, what I meant is that by
Hi,
On Wed, Mar 30, 2011 at 10:02 AM, Ralf Gommers
ralf.gomm...@googlemail.com wrote:
On Wed, Mar 30, 2011 at 3:39 AM, Matthew Brett matthew.br...@gmail.com
wrote:
Hi,
On Mon, Mar 28, 2011 at 11:29 PM, josef.p...@gmail.com wrote:
numpy/lib/test_io.py only uses StringIO in the test
Hi,
On Wed, Mar 30, 2011 at 11:32 AM, Pauli Virtanen p...@iki.fi wrote:
On Wed, 30 Mar 2011 10:37:45 -0700, Matthew Brett wrote:
[clip]
imagine I'm working with a non-latin default encoding, and I've opened a
file:
fobj = open('my_nonlatin.txt', 'rt')
in python 3.2. That might contain
Hi,
On Mon, Mar 28, 2011 at 11:29 PM, josef.p...@gmail.com wrote:
numpy/lib/test_io.py only uses StringIO in the test, no actual csv file
If I give the filename than I get a TypeError: Can't convert 'bytes'
object to str implicitly
from the statsmodels mailing list example
data =
Hi,
Running the test suite for one of our libraries, there seems to have
been a recent breakage of the behavior of dtype hashing.
This script:
import numpy as np
data0 = np.arange(10)
data1 = data0 - 10
dt0 = data0.dtype
dt1 = data1.dtype
assert dt0 == dt1 # always passes
assert hash(dt0) ==
robert.k...@gmail.com
wrote:
On Wed, Mar 16, 2011 at 01:18, Matthew Brett matthew.br...@gmail.com
wrote:
Hi,
Running the test suite for one of our libraries, there seems to have
been a recent breakage of the behavior of dtype hashing.
This script:
import numpy as np
data0
Hi,
On Wed, Mar 16, 2011 at 1:56 PM, lists_r...@lavabit.com wrote:
On Wed, Mar 16, 2011 at 15:18, lists_r...@lavabit.com wrote:
In [10]: x
Out[10]:
array(array((7.399500875785845e-10, 7.721153414752673e-10, -0.984375),
   dtype=[('cl', '|O8'), ('tl', '|O8'), ('dagc', '|O8')]),
Hi,
On Sun, Mar 13, 2011 at 12:07 PM, Matthew Brett matthew.br...@gmail.com wrote:
Hi,
On Sun, Mar 13, 2011 at 11:51 AM, Christoph Gohlke cgoh...@uci.edu wrote:
On 3/13/2011 11:29 AM, Matthew Brett wrote:
Hi
On Sun, Mar 13, 2011 at 9:54 AM, Christoph Gohlkecgoh...@uci.edu wrote:
On 3
Hi,
On Tue, Mar 15, 2011 at 10:12 AM, Pauli Virtanen p...@iki.fi wrote:
Tue, 15 Mar 2011 10:06:09 -0700, Matthew Brett wrote:
Sorry to ask, and I ask partly because I'm in the middle of a py3k port,
but is this the right fix to this problem? I was confused by the
presence of the old
Hi,
On Tue, Mar 15, 2011 at 11:07 AM, Pauli Virtanen p...@iki.fi wrote:
Tue, 15 Mar 2011 10:23:35 -0700, Matthew Brett wrote:
[clip]
OK - I realize I'm being very lazy here but, do you mean:
PyErr_Format(PyExc_ValueError,
field named %s not found
Hi,
On Tue, Mar 15, 2011 at 10:23 AM, Matthew Brett matthew.br...@gmail.com wrote:
Hi,
On Tue, Mar 15, 2011 at 10:12 AM, Pauli Virtanen p...@iki.fi wrote:
Tue, 15 Mar 2011 10:06:09 -0700, Matthew Brett wrote:
Sorry to ask, and I ask partly because I'm in the middle of a py3k port
Hi,
I just wrote a short test for indexing into structured arrays with
strings and found this:
In [4]: a = np.zeros((1,), dtype=[('f1', 'i4')])
In [5]: a['f1']
Out[5]: array([0])
In [6]: a['f2'] # not present - error
---
Hi,
On Tue, Mar 15, 2011 at 5:30 PM, Christoph Gohlke cgoh...@uci.edu wrote:
On 3/15/2011 5:13 PM, Matthew Brett wrote:
Hi,
On Tue, Mar 15, 2011 at 10:23 AM, Matthew Brettmatthew.br...@gmail.com
wrote:
Hi,
On Tue, Mar 15, 2011 at 10:12 AM, Pauli Virtanenp...@iki.fi wrote:
Tue, 15
Hi,
On Tue, Mar 15, 2011 at 5:55 PM, Matthew Brett matthew.br...@gmail.com wrote:
Hi,
On Tue, Mar 15, 2011 at 5:30 PM, Christoph Gohlke cgoh...@uci.edu wrote:
On 3/15/2011 5:13 PM, Matthew Brett wrote:
Hi,
On Tue, Mar 15, 2011 at 10:23 AM, Matthew Brettmatthew.br...@gmail.com
wrote
Hi,
I have this on my OSX 10.6 system and numpy 1.5.1 and current numpy
head (30ee1d352):
$ python3.2
Python 3.2 (r32:88452, Feb 20 2011, 11:12:31)
[GCC 4.2.1 (Apple Inc. build 5664)] on darwin
Type help, copyright, credits or license for more information.
import numpy as np
a = np.zeros((1,),
Hi
On Sun, Mar 13, 2011 at 9:54 AM, Christoph Gohlke cgoh...@uci.edu wrote:
On 3/13/2011 1:57 AM, Matthew Brett wrote:
Hi,
I have this on my OSX 10.6 system and numpy 1.5.1 and current numpy
head (30ee1d352):
$ python3.2
Python 3.2 (r32:88452, Feb 20 2011, 11:12:31)
[GCC 4.2.1 (Apple Inc
Hi,
On Sun, Mar 13, 2011 at 11:51 AM, Christoph Gohlke cgoh...@uci.edu wrote:
On 3/13/2011 11:29 AM, Matthew Brett wrote:
Hi
On Sun, Mar 13, 2011 at 9:54 AM, Christoph Gohlkecgoh...@uci.edu wrote:
On 3/13/2011 1:57 AM, Matthew Brett wrote:
Hi,
I have this on my OSX 10.6 system
Hi,
On Wed, Dec 29, 2010 at 5:37 PM, Robert Bradshaw
rober...@math.washington.edu wrote:
On Wed, Dec 29, 2010 at 9:05 AM, Keith Goodman kwgood...@gmail.com wrote:
On Tue, Dec 28, 2010 at 11:22 PM, Robert Bradshaw
rober...@math.washington.edu wrote:
On Tue, Dec 28, 2010 at 8:10 PM, John
Forgive me if I haven't understood your question, but can you use
PyArray_DescrFromType with e.g NPY_FLOAT64 ?
I'm pretty hopeless here. I don't know how to put all that together in
a function.
That might be because I'm not understanding you very well, but I was
thinking that:
cdef dtype
Hi,
That might be because I'm not understanding you very well, but I was
thinking that:
cdef dtype descr = PyArray_DescrFromType(NPY_FLOAT64)
would give you the float64 dtype that I thought you wanted? I'm
shooting from the hip here, in between nieces competing for the
computer and my
Hi,
On Tue, Nov 30, 2010 at 11:35 AM, Keith Goodman kwgood...@gmail.com wrote:
On Tue, Nov 30, 2010 at 11:25 AM, John Salvatier
jsalv...@u.washington.edu wrote:
I am very interested in this result. I have wanted to know how to do an
My first thought was to write the reducing function like
Hi,
On Mon, Nov 22, 2010 at 11:35 AM, Christopher Barker
chris.bar...@noaa.gov wrote:
On 11/20/10 11:04 PM, Ralf Gommers wrote:
I am pleased to announce the availability of NumPy 1.5.1.
Binaries, sources and release notes can be found at
https://sourceforge.net/projects/numpy/files/.
Thank
On Sun, Nov 14, 2010 at 12:48 PM, Robin Kraft rkra...@gmail.com wrote:
Git is having some kind of major outage:
http://status.github.com/
The site and git access is unavailable due to a database failure. We're
researching the issue.
A good excuse for a long lazy Sunday...
Matthew
Hi,
On Tue, Nov 9, 2010 at 7:48 AM, Charles R Harris
charlesr.har...@gmail.com wrote:
On Tue, Nov 9, 2010 at 8:20 AM, Scott Sinclair scott.sinclair...@gmail.com
wrote:
On 8 November 2010 23:17, Matthew Brett matthew.br...@gmail.com wrote:
Since the change to git the numpy version
Hi,
On Thu, Nov 11, 2010 at 11:44 AM, Charles R Harris
charlesr.har...@gmail.com wrote:
On Thu, Nov 11, 2010 at 12:32 PM, Matthew Brett matthew.br...@gmail.com
Tiny patch for py3k attached.
Should the generated numpy/version.py be in .gitignore? Is there a
better name in order to signal
Hi,
On Mon, Nov 8, 2010 at 10:34 AM, Pauli Virtanen p...@iki.fi wrote:
Mon, 08 Nov 2010 19:31:31 +0100, Pauli Virtanen wrote:
ma, 2010-11-08 kello 18:56 +0100, LittleBigBrain kirjoitti:
In my system '' is the native byte-order, but unless I change the
byte-order label to '=', it won't work
Hi,
Since the change to git the numpy version in setup.py is '2.0.0.dev'
regardless because the prior numbering was determined by svn.
Is there a plan to add some numbering system to numpy developmental version?
Regardless of the answer, the 'numpy/numpy/version.py' will need to
changed
Hi,
I have just run into this oddness:
In [28]: dt1 = np.dtype('f4')
In [29]: dt1.str
Out[29]: 'f4'
In [30]: dt2 = dt1.newbyteorder('')
In [31]: dt2.str
Out[31]: 'f4'
In [32]: dt1 == dt2
Out[32]: True
In [33]: hash(dt1) == hash(dt2)
Out[33]: False
This is the same as:
Hi,
It already has a ticket :)
http://projects.scipy.org/numpy/ticket/1637
Oops - sorry - thanks for point that out.
Cheers,
Matthew
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NumPy-Discussion@scipy.org
Hi,
Now might be a good time to discuss how we'd like the history to look
in a year from now. If we follow the above approach, I guess we may
end up with one merge message for each small little bug-fix? (Unless
--rebase is used) How do we ensure that fast-forward merges occur
whenever
Hi,
I think there are two issues here:
(A) How to be sensible and presentable
(B) How and when your stuff gets into master
A very useful distinction - thanks for making it.
For (A) I'm following the same workflow I had with the git mirror:
1. For *every* change, create a separate topic
Hi,
All my sincere apologies for the mess I caused... The changes I wanted to
commit were quite minimal (just a few lines in a test), but I obviously
included some stuffs I didn't want too...
Ah - no - so sorry that the discussion got attached to your original
post and problem.
I would
Hi,
Does anyone disagree with Pauli's never-push-your-own-changes suggestion?
I think it is a little too extreme for trivial changes like one-liner
and the likes, but I think it is a good default rule (that is if you are
not sure, don't push your own changes).
Well - but
a) if it's a
Hi guys,
Am I right in thinking that for the moment at least, the git workflow
is basically the same as the svn workflow (everyone commiting to
trunk)?
I realize that this is not going to cheer anyone up, but is this the
best workflow now? Who would decide?
Best,
Matthew
Hi,
In my opinion, I've seen a lot of people coming from SVN try to apply
SVN-style workflow to git (and presumably other dvcs's), but git and
the like (and Github!) allow for much more fine-tuned workflows in my
opinion, and I think it's a mistake to ignore that. I'm just some guy,
though,
Hi,
I find having the branch displayed on the command line helpful in avoiding
mishaps, so I have the following in my .bashrc
export PS1='\[\033[1;31m\]\$\[\033[0m\...@\h \W$(__git_ps1 (%s))\\$ '
The \W$(__git_ps1 (%s)) bit is the important part.
Yes, that one's a lifesaver. It's part
Hi,
In my opinion, I've seen a lot of people coming from SVN try to apply
SVN-style workflow to git (and presumably other dvcs's), but git and
the like (and Github!) allow for much more fine-tuned workflows in my
opinion, and I think it's a mistake to ignore that. I'm just some guy,
though,
Hi,
'Talk is cheap, show me the code' .
Yes, let's.
First we want to initialize memory mapped arrays which will be used for
the variables. This python script does that:
Ah - no - sorry - I was suggesting you write an implementation of the
object you want, in numpy. I am sure that was not
Hi,
On Thu, Oct 7, 2010 at 3:47 PM, Andrew P. Mullhaupt
d...@zen-pharaohs.com wrote:
On 10/7/2010 3:48 PM, Anne Archibald wrote:
Years ago MATLAB did just this - store real and complex parts of
arrays separately (maybe it still does, I haven't used it in a long
time). It caused us terrible
Hi,
On Tue, Sep 21, 2010 at 2:44 PM, Benjamin Root ben.r...@ou.edu wrote:
On Tue, Sep 21, 2010 at 4:31 PM, Michael Gilbert
michael.s.gilb...@gmail.com wrote:
Hi,
The following example demonstrates a rather unexpected result:
import numpy
x = numpy.array( complex( 1.0 , 1.0 ) ,
Hi,
On Tue, Sep 21, 2010 at 3:28 PM, Robert Kern robert.k...@gmail.com wrote:
On Tue, Sep 21, 2010 at 17:17, Pauli Virtanen p...@iki.fi wrote:
Tue, 21 Sep 2010 21:50:08 +, Pauli Virtanen wrote:
Tue, 21 Sep 2010 17:31:55 -0400, Michael Gilbert wrote:
The following example demonstrates a
Hi,
I see that I have interpreted this thread as Doctor, it hurts when I do
this... Well, don't do that! Sorry for the noise.
It's all good - a reply is almost always more friendly and helpful
than no reply ;)
See you,
Matthew
___
Hi,
Yeah, it's just that numpy knows that it cannot compare pears with apples:
a = numpy.asarray(['a', 'b'])
a.__eq__(1)
NotImplemented
Thank you - that's very helpful and clear.
Maybe it would be better to raise a ValueError, which is not caught by
the evaluation mechanism, to prevent
Hi,
On Wed, Jul 28, 2010 at 6:49 PM, John Salvatier
jsalv...@u.washington.edu wrote:
I think this is just Python behavior; comparing python ints and strs also
gives False:
In [45]: 8 == 'L'
Out[45]: False
Just to be clear, from:
a = np.array(['a','b'])
a == 1
I was expecting:
array([
Hi,
Please forgive me if this is obvious, but this surprised me:
In [15]: x = np.array(['a', 'b'])
In [16]: x == 'a' # this was what I expected
Out[16]: array([ True, False], dtype=bool)
In [17]: x == 1 # this was strange to me
Out[17]: False
Is it easy to explain why this is?
Thanks a lot,
On Mon, Jul 26, 2010 at 1:56 PM, Gael Varoquaux
gael.varoqu...@normalesup.org wrote:
On Mon, Jul 26, 2010 at 01:52:06PM -0700, Matthew Brett wrote:
http://old.nabble.com/numpydoc-broken-by-latest-sphinx-td28896476.html
http://projects.scipy.org/numpy/ticket/1489
Darn, I should have googled
Hi,
I just wanted to mention that numpydoc is broken with the latest sphinx
release. I had a quick look, but could find how to solve the problem, so
I am just pointing it out here:
For reference in case anyone is searching...
Hi,
Can you copyright a word ? I thought this was the trademark part of
the law. For example, linux is a trademark owned by Linus Torvald.
Also, well known packages use words which are at least as common as
bento in English (sphinx, twisted, etc...), and as likely to be
trademarked.
I got
Hi,
Can numpy.distutils be directed to process *.pyx with Cython rather than
Pyrex?
Yes, but at the moment I believe you have to monkey-patch numpy
distutils : see the top of
http://github.com/matthew-brett/nipy/blob/master/setup.py
and generate_a_pyrex_source around line 289 of:
http
Hi,
Sorry if y'all had already seen this, but a friend just picked up the
latest sphinx with
easy_install -U sphinx
- got version 1.0b2 - and then hit this problem with numpydoc:
http://projects.scipy.org/numpy/ticket/1489
I just point it out in the hope that someone with more sphinx
you're right, the 'name' is nothing to do with
the github username. I guess we do need to send the Git ID we like to
use though (in my case Matthew Brett matthew.br...@gmail.com).
See you,
Matthew
___
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by
git itself (as recorded in the commit objects).
Actually - isn't it better if people do give you their github username
/ email combo - assuming that's the easiest combo to work with later?
Mine is 'matthew-brett' with this (my usual) email address,
See you,
Matthew
Hi.
Maybe you could put up a list of those people whose emails you need to
scrape (obviously without the email addresses) and ask for opt-out?
Or opt-in if you think that's better?
So here is the list of authors:
Do y'all think opt-in? Or opt-out?If it's opt-in I guess you'll
catch
Hi,
I don't think correcting the email addresses in the SVN history is very
useful. Best probably just use some dummy form, maybe
That's what svn2git already does, so that would be less work for me :)
It may not matter much, but I think there is at least one argument for
having real emails:
Hi,
How does that differ from what we do now? Review? I develop in my own
branches as is.
Right - so - then do you always ask for a review from someone before
merging into trunk? If so, then git is just a much more fluid,
reliable and faster tool to do what you are doing now.
True, but what
Hi,
Having said that - it will of course happen that you ask for review
and no-one responds. That's not a very big problem, because git
merges are so easy that you can - as Anne said earlier - just keep on
developing without worrying that your changes will go out of date.
But if there's a
Hi,
Maybe most importantly, distributed revision control places any
possible contributor on equal footing with those with commit access;
this is one important step in making contributors feel valued.
I think this is a very important point, but subtle. I realize that's
a dangerous
Hi,
I think the main problem has been windows compatibility. Git is best from
the command line whereas the windows command line is an afterthought.
Another box that needs a check-mark is the buildbot. If svn clients are
supported then it may be that neither of those are going to be a problem.
Hi,
there is no such thing as a nice bash shell for a windows user.
I have no idea how to use one.
It is a nice bash shell. You may not want a nice bash shell ;)
I can't imagine you'd object to one though. It's just a useful place
to type git commands, with file / directory path
Hi,
Any shell on windows is a pain, if only because of the spaces in the
filenames.
When I'm using git, or bzr or svn I use the windows shell which I'm
very familiar with ,and allows standard copy-paste and has quotes.
But since, I think, there are no numpy developers on Windows, and I'm
Hi,
It seems to me that git's flexibility in how people collaborate means
we can do a certain amount of figuring out after the switch.
This is very well said and true to our recent experience with nipy and ipython:
http://github.com/ipython/ipython
http://github.com/nipy/nipy
My
experience
Hi,
Linux has Linus, ipython has Fernando, nipy has... well, I'm sure it is
somebody. Numpy and Scipy no longer have a central figure and I like it that
way. There is no reason that DVCS has to inevitably lead to a central
authority.
I think I was trying to say that the way it looks as if it
Hi,
No, at this point we don't have a release manager, we haven't since 1.2. We
have people who do the builds and put them up on sourceforge, but they
aren't release managers, they don't decide what is in the release or
organise the effort. We haven't had a central figure since Travis got a
Hi,
No, I am saying we need at least five people who can commit to the main
repo. That is the central repository model.
Excellent - yes - that's reasonable. Then if you also agree to this:
No development in the main repo. Merges only.
then we're all in full agreement.
Review is fine,
Hi,
I kind of like this idea. Simple, obvious, and leads
to clear code:
a.dot(b).dot(c)
or in another multiplication order,
a.dot(b.dot(c))
And here's an implementation:
http://github.com/pv/numpy-work/commit/414429ce0bb0c4b7e780c4078c5ff71c113050b6
I think
Hi,
We (neuroimaging.scipy.org) are using numpy.distutils, and we have
.pyx files that we build with Cython.
I wanted to add these in our current setup.py scripts, with something like:
def configuration(parent_package='',top_path=None):
from numpy.distutils.misc_util import Configuration
numpy.distutils.command import build_src
import Cython
import Cython.Compiler.Main
build_src.Pyrex = Cython
build_src.have_pyrex = True
I think this patch does not work for current numpy trunk; I've put a
minimal test case here:
http://github.com/matthew-brett/du-cy-numpy
If you run
Hi,
I just noticed this:
In [2]: np.isfinite(np.inf)
Warning: invalid value encountered in isfinite
Out[2]: False
Maybe it would be worth not raising the warning, in the interests of tidiness?
Matthew
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Hi,
On Sat, Feb 13, 2010 at 11:53 AM, Xavier Gnata xavier.gn...@gmail.com wrote:
IMHO 2.0 should support python3.
That would be a major step and a good reason to call it 2.0.
I agree with Travis, I think we should try not to attach too much
importance to the big number change, release 2.0 just
Hi,
Sounds to me like you don't fully agree w/ Travis - he said This is exactly
what I was worried about with calling the next release 2.0. Seems that
Travis understands that the larger community, whether we want them to or
not, _does_ attach...much importance to [a] big number change and
Hi,
I don't know if y'all are subscribed to the ATLAS mailing list, but,
it would be good if we could find a way of supporting Clint as
strongly as we can.
Best,
Matthew
-- Forwarded message --
From: Clint Whaley wha...@cs.utsa.edu
Date: Fri, Feb 12, 2010 at 9:15 AM
Subject:
Hi,
On Fri, Feb 12, 2010 at 7:02 AM, Fernando Perez fperez@gmail.com wrote:
On Mon, Feb 8, 2010 at 7:25 PM, Robert Kern robert.k...@gmail.com wrote:
Here's the problem that I don't think many people appreciate: logical
arguments suck just as much as personal experience in answering these
Hi,
Just a comment: I would like to point out that there is (necessarily)
some arbitrary threshold to who is being recognized as people who are
actively writing the code. Over the last year, I have posted fixes
for multiple bugs and extended the ufunc wrapping mechanisms
(__array_prepare__)
Hi,
I don't want to go the route of marking things experimental which David's
pro-1.5 vote seemed to advocate. From what I gathered, Pauli, David, and I
were 1.5 with various degrees of opinion and Charles, and Robert are 2.0.
Others that I know about: Stephan is 1.5, Jarrod is 2.0,
Hi,
NumPy decisions in the past have been made by me and other people who are
writing the code. I think we have tried pretty hard to listen to all
points of view before doing anything. I think there are many examples of
this. I hope this previous history alleviates some concern that
On Mon, Feb 8, 2010 at 2:07 PM, Robert Kern robert.k...@gmail.com wrote:
On Mon, Feb 8, 2010 at 16:05, Darren Dale dsdal...@gmail.com wrote:
On Mon, Feb 8, 2010 at 5:05 PM, Jarrod Millman mill...@berkeley.edu wrote:
On Mon, Feb 8, 2010 at 1:57 PM, Charles R Harris
charlesr.har...@gmail.com
Hi,
On Mon, Feb 8, 2010 at 2:05 PM, Jarrod Millman mill...@berkeley.edu wrote:
On Mon, Feb 8, 2010 at 1:57 PM, Charles R Harris
charlesr.har...@gmail.com wrote:
Should the release containing the datetime/hasobject changes be called
a) 1.5.0
b) 2.0.0
My vote goes to b.
I guess Travis'
Trust me, the steering committee would much prefer not to decide
anything by any means.
I do trust you ;)
Looking at the emails, it seems to me there's quite a strong consensus.
You don't mean that the steering committee is needed when people on
the steering committee don't agree with the
No, there isn't. Consensus means everyone, not just a strong majority.
http://producingoss.com/en/consensus-democracy.html
I stand corrected. I meant then, that there's a strong majority
agreement on what to do.
See you,
Matthew
___
Hi,
That is correct. And having failed to find a consensus solution and
with several of the people doing the actual work disagreeing (which is
neither you, nor I, nor Darren, nor most readers on this list who have
weighed in on the discussion phase and may feel miffed about not
getting a
Hi,
I'm continuing only because, the discussion has generated some heat,
and I think part of that heat comes from the perception that the
excellent community spirit of the project is somewhat undermined by
the feeling that reasonable arguments are not being fully heard.
How does one get
Hi,
Is that a real question?
Absolutely. What leads you to believe that the reasonable arguments
aren't being heard? If one were to start a thread giving an idea and
no one responds while vigorous discussion is happening in other
threads, that would certainly be visible evidence of that
Hi,
Majorities don't make numpy development decisions normally. Never
have. Not of the mailing list membership nor of the steering
committee. Implementors do. When implementors disagree strongly and do
not reach a consensus, then we fall back to majorities. But as I said
before, majority
Hi,
Getting rid of FILE* pointers and file descriptor would also helps
quite a bit on windows. I know that at some point, there were some
discussions to make the python C API safe to multiple C runtimes, but
I cannot find any recent discussion on that fact. I should just ask on
python-dev, I
Hi,
If that's the case, and particularly if it's going to be a while before
1.4.1 is ready, I suggest that the 1.4.0 release be pulled from current
release status on the download sites.
+1. If the decision is as you say, I agree with you.
That seems reasonable to me too...
Best,
Matthew
HI,
I'm trying to import data from a matlab file using scipy.io.loadmat.
One of the variables in the file imports as an array of shape (51,) of
dtype object, with each element being an array of shape (23,100) of
dtype float. How do I convert this array into a single array of dtype
float with
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