Re: [Paraview] Filter suddenly stopped working "did not create output for port 0"

2017-12-08 Thread Chris Marsh
On MacOS. I had an old paraview in my path that I removed prior to this. Perhaps that was it...changed too much now On 8 December 2017 at 07:38, Utkarsh Ayachit wrote: > > I had previously configured paraview with ccmake and set build type to > > Release and

Re: [Paraview] animation: files, pgmable source

2017-12-08 Thread Heiland, Randy
Have a user read in a state file to experiment with a pipeline/filters on a single data file, e.g. they may have 1000 files and they want to initially look at the last one. When they’re content with the vis on a single file, they’d like to view an animation in PV on all (or mod N) files. When

Re: [Paraview] animation: files, pgmable source

2017-12-08 Thread Utkarsh Ayachit
Randy, Mind explaining to me what;s your ultimate goal? The way I see it, there are two options: 1. Provide your users with a state file that they load in ParaView UI and then use the UI to save animation or images. Use the UI to move back and forth through the timesteps, etc. 2. Provide your

Re: [Paraview] [EXTERNAL] Segfault with 'Hover Cells' over 3d glyphs

2017-12-08 Thread Scott, W Alan
I believe that the warnings you are seeing is new in the developers tree (i.e., the Alpha that was released for SC), and is being looked at here: https://gitlab.kitware.com/paraview/paraview/issues/17633#note_352250. If they don’t go away, we will have to fix them. The main crash is real. I

Re: [Paraview] animation: files, pgmable source

2017-12-08 Thread Heiland, Randy
No, no, I’m sure it’s *me* who’s confused. I’m not sure I understand what you’re saying. Are you suggesting keeping the (full) range of timesteps in my script and then, somehow, only render the one of interest? If so, that would be great, except the way things are currently working for me,

Re: [Paraview] animation: files, pgmable source

2017-12-08 Thread Utkarsh Ayachit
Oops. I meant to say -- "I am a little confused here" :). On Fri, Dec 8, 2017 at 10:10 AM, Utkarsh Ayachit wrote: > Hmm, little confused here? Why not keep the timesteps in the reader > unchanged and explcitly do the timestep of interest and save > screenshot? > > On

Re: [Paraview] animation: files, pgmable source

2017-12-08 Thread Utkarsh Ayachit
Hmm, little confused here? Why not keep the timesteps in the reader unchanged and explcitly do the timestep of interest and save screenshot? On Thu, Dec 7, 2017 at 10:51 AM, Heiland, Randy wrote: > Utkarsh, > > Thanks very much for that! Yes, after some fiddling, I got it to

Re: [Paraview] from matlab to paraview

2017-12-08 Thread Chuck Atkins
Hi Doina, Can you not just open it directly from [File] -> "Open"? Or are you wanting to build a script to do automated processing? If you're trying to do automated processing, the easiest way to build your script is perform the actions in the GU and "record" that as a python script with

Re: [Paraview] Filter suddenly stopped working "did not create output for port 0"

2017-12-08 Thread Utkarsh Ayachit
> I had previously configured paraview with ccmake and set build type to > Release and enabled Python. > Any idea how that may impact this? Not entirely sure how, unless some incorrect libraries are getting loaded. Are you on Windows? Is your PATH sane? Utkarsh

Re: [Paraview] BUG REPORT: Axes grid option grayed out, version 5.4.1 64bit, on Ubuntu 16.04

2017-12-07 Thread Cory Quammen
Hmm, that's strange. Can you give step-by-step directions on how to make the buttons grayed out, preferably with a simple starting source such as the Sphere source or Wavelet source? Thanks, Cory On Thu, Dec 7, 2017 at 11:25 PM, Jianbo Long wrote: > Hello, > > I am

[Paraview] BUG REPORT: Axes grid option grayed out, version 5.4.1 64bit, on Ubuntu 16.04

2017-12-07 Thread Jianbo Long
Hello, I am trying to add axes information to a clipped 3-D mesh, which was generated by clipping, slicing, and clipping of a 3-D mesh from a .VTK file. However, in the latest Paraview version 5.4.1, the 'Axes grid' option sometimes doesn't work (grayed out, please see attached picture). I

Re: [Paraview] Filter suddenly stopped working "did not create output for port 0"

2017-12-07 Thread Chris Marsh
OK I have it working on my end. I had previously configured paraview with ccmake and set build type to Release and enabled Python. Any idea how that may impact this? Chris Marsh PhD Candidate chrismarsh.ca 121 Research Drive University of Saskatchewan On 7 December 2017 at 13:41, Chris Marsh

Re: [Paraview] Filter suddenly stopped working "did not create output for port 0"

2017-12-07 Thread Chris Marsh
Hi, Thanks for trying this. Good call on the removal of the extra CMake stuff. It was there because I started this filter before I knew about things like setting ParaView_DIR and forgot to update this! Interesting that works for you. I just rebuilt with the change to use ParaView_DIR (on the off

Re: [Paraview] animation: files, pgmable source

2017-12-07 Thread Heiland, Randy
Utkarsh, Thanks very much for that! Yes, after some fiddling, I got it to work, i.e., I can save .png files for an animation! So now that I’m using the Programmable Source(RequestInfo) script to accomplish the animation, how do I, during a PV session, *easily* switch back to render a single

[Paraview] from matlab to paraview

2017-12-07 Thread Doina Gumeniuc (224252 MAHS)
Hi all! I have created a vtk file in matlab and I would like to export it to paraview. I need a script/function which would load this vtk file from matlab to paraview. I would really appreciate if any of you could share some hints or some links where such a process is explained. Thank you!

Re: [Paraview] animation: files, pgmable source

2017-12-06 Thread Utkarsh Ayachit
Randy, You attempting to mix the Python scripting for data processing and Python scripting for batch scripting. The two environments are separate. Here's how I'd tackle it. 1. Make your "Programmable Source" become a temporal source i.e. report to ParaView that it can produce timesteps matching

Re: [Paraview] loading multiple state-files without hiding and resetting already loaded objects

2017-12-06 Thread Cory Quammen
Hi Roman, Sorry I failed to follow up. Did you find a solution to this problem? This line in your script looks funny to me: d[props] = pvs.GetProperty(repr, props[0]) Shouldn't props[0] just be props? Thanks, Cory On Fri, Nov 10, 2017 at 10:28 AM, Grothausmann, Roman Dr.

Re: [Paraview] How to read the file info in *pvd file

2017-12-06 Thread Ke Gao
Thanks Cory. That's what I'm planning to do. It's really helpful. Ke On Wed, Dec 6, 2017 at 2:27 PM, Cory Quammen wrote: > Did you make progress on this? You should just be able to use your > favorite Python XML module to locate all the elements and > find the "file"

Re: [Paraview] How to read the file info in *pvd file

2017-12-06 Thread Cory Quammen
Did you make progress on this? You should just be able to use your favorite Python XML module to locate all the elements and find the "file" attributes to get the *pvtu file names. Then you can parse those *pvtu XML files to get whatever information you want. One such module is documented here:

[Paraview] Memory issue for remote visualization

2017-12-06 Thread Dennis Conklin
All, As we start down the road to parallel visualization, our first baby steps are to try remote visualization. In Redhat, I ssh onto a node with ~30 gigs of memory available (free -m) I start pvserver. Back on my machine I launch paraview541 and connect to the server. The Memory Inspector

[Paraview] Windows Mixed Reality

2017-12-06 Thread Ken Martin
Just a FYI, I just had a chance to test out a new Windows Mixed Reality headset and it seems to work well with VTK and ParaView through the SteamVR driver. I was testing the new Dell Visor headset and controller. The controllers show up properly and the controls map to reasonable settings.

[Paraview] animation: files, pgmable source

2017-12-06 Thread Heiland, Randy
I’m probably missing a basic concept and hoping someone can enlighten me. I have a pipeline with a Programmable Source that reads in a (non-VTK formatted) file, I process it and then I have filters in my pipeline that act on that data. I want to be able to feed multiple files to the pipeline,

Re: [Paraview] wallShearStress Calculation in Paraview

2017-12-06 Thread Andy Bauer
There's no general way to compute gradients normal to the surface so you need to compute the gradient on the simulation's cells (e.g. volumetric cells for 3D). You can use the Gradient Of Unstructured Data set to do that. Then extract the surface as Mathi said, use the Normals filter to compute

Re: [Paraview] wallShearStress Calculation in Paraview

2017-12-06 Thread Stephen Wornom
Thanks, but did you forget to include the name of the forum? Stephen - Original Message - > From: "Ezhilmathi Krishnasamy" > To: "Ahmet Ahmet" > Cc: "ParaView" > Sent: Wednesday, December 6, 2017 3:05:56 PM >

Re: [Paraview] Update Programmable Source

2017-12-06 Thread Cory Quammen
> Is there a possibility to perform a cyclic update of a Programmable Source? What do you mean? Do you mean update a Programmable Source once every time period? > > > > > > Best, > > Lukas > > > > > > > > ___ > Powered by www.kitware.com > > Visit

Re: [Paraview] wallShearStress Calculation in Paraview

2017-12-06 Thread Ezhilmathi Krishnasamy
Hi Ahmet, What you can do that is, use the filter name called extract surface. once you get that surface either you can export those values in form of from elements or from the points. It might work, or you may get more clear explanation from this forum. Cheers, Mathi On 6 December 2017 at

[Paraview] wallShearStress Calculation in Paraview

2017-12-06 Thread Ahmet Ahmet
Hello everyone, I have results with OpenFOAM including p,T,U outputs. Due to some reasons, I can't use wallShearStress or wallgradU utility in OF. So, I have to calculate it on Paraview. I saw many topics related to that on google, but I could not find a satisfactory answer. My case is 3-D,

Re: [Paraview] Warp by vector not fully working

2017-12-06 Thread Doina Gumeniuc (224252 MAHS)
SOLVED! From: ParaView on behalf of Doina Gumeniuc (224252 MAHS) <224...@via.dk> Sent: December 6, 2017 10:10:26 AM To: paraview@paraview.org Subject: Re: [Paraview] Warp by vector not fully working Sorry! Silly me, I needed

Re: [Paraview] Warp by vector not fully working

2017-12-06 Thread Doina Gumeniuc (224252 MAHS)
Sorry! Silly me, I needed point instead of comma. Could you please let me know the way to introduce more displacement fields? Thank you! From: ParaView on behalf of Doina Gumeniuc (224252 MAHS) <224...@via.dk> Sent: December 6,

[Paraview] Warp by vector not fully working

2017-12-06 Thread Doina Gumeniuc (224252 MAHS)
Hi all! I have a structure from points and lines. The POINT_DATA contains some displacement vectors. When I load it in Paraview and use Warp by Vector, it does not give me any displacement or change in color. Is my code wrong? Please see my file attached. Also, I would like to add under

Re: [Paraview] Optimus and Windows 10

2017-12-06 Thread Paul Melis
Thanks, good to know. We'll try 5.2 (qt4) if the issue surfaces again, Paul On 05-12-17 14:13, Aron Helser wrote: Yes, that Intel driver bug is known to affect ParaView: https://gitlab.kitware.com/paraview/paraview/issues/17499 Regards, Aron On Tue, Dec 5, 2017 at 6:40 AM, Jonathan Borduas

[Paraview] Update Programmable Source

2017-12-06 Thread FIXED-TERM Eberle Lukas (CC-PS/ECL5)
Hi, Is there a possibility to perform a cyclic update of a Programmable Source? Best, Lukas ___ Powered by www.kitware.com Visit other Kitware open-source projects at http://www.kitware.com/opensource/opensource.html Please keep messages

[Paraview] Filter suddenly stopped working "did not create output for port 0"

2017-12-05 Thread Chris Marsh
Hi, I have a filter that decodes a posix string from a pvd file into a datetime format. This has worked well, however with the newest paraview I get the error ERROR: In ParaView-v5.4.1/VTK/Common/ExecutionModel/vtkDemandDrivenPipeline.cxx, line 672 vtkPVCompositeDataPipeline (0x60c0001ad9e0):

Re: [Paraview] Segfault with 'Hover Cells' over 3d glyphs

2017-12-05 Thread Wyatt Spear
I just tried it with my larger data set (easier to select individual cells) and it crashed with 5.4.1. I'm not sure what the difference was with the smaller data set in 5.4.1 that let it work. =Wyatt On Tue, Dec 5, 2017 at 12:00 PM, David E DeMarle wrote: > Crashes for

Re: [Paraview] Segfault with 'Hover Cells' over 3d glyphs

2017-12-05 Thread David E DeMarle
Crashes for me. David E DeMarle Kitware, Inc. Principal Engineer 21 Corporate Drive Clifton Park, NY 12065-8662 Phone: 518-881-4909 On Tue, Dec 5, 2017 at 2:59 PM, Wyatt Spear wrote: > Nope, 5.4.1 seems to work correctly. > =Wyatt > > On Tue, Dec 5, 2017 at 11:29 AM,

Re: [Paraview] Segfault with 'Hover Cells' over 3d glyphs

2017-12-05 Thread Wyatt Spear
Nope, 5.4.1 seems to work correctly. =Wyatt On Tue, Dec 5, 2017 at 11:29 AM, David E DeMarle wrote: > The output warnings you are seeing are unrelated and fixed in master. > > Can reproduce the bug with 5.4.1 binary on linux. > > > > > David E DeMarle > Kitware, Inc. >

Re: [Paraview] Segfault with 'Hover Cells' over 3d glyphs

2017-12-05 Thread David E DeMarle
The output warnings you are seeing are unrelated and fixed in master. Can reproduce the bug with 5.4.1 binary on linux. David E DeMarle Kitware, Inc. Principal Engineer 21 Corporate Drive Clifton Park, NY 12065-8662 Phone: 518-881-4909 On Tue, Dec 5, 2017 at 2:10 PM, Wyatt Spear

[Paraview] Segfault with 'Hover Cells' over 3d glyphs

2017-12-05 Thread Wyatt Spear
Greetings, I'm using the SC17 preview of 5.5 of ParaView. I first noticed this error with my own dataset but it appears with the simple test.csv I've included. To reproduce the segfault: Load the attached (or presumably any) CSV points file. Run the TableToPoints filter. Assign the X/Y/Z column

Re: [Paraview] [EXTERNAL] Re: background color not saved in state

2017-12-05 Thread Cory Quammen
Great, thanks Alan. Cory On Tue, Dec 5, 2017 at 12:58 PM, Scott, W Alan wrote: > Cory, > I've replicated this one. It is still in master. I wrote it up a while ago > here: https://gitlab.kitware.com/paraview/paraview/issues/16879. I will > update the bug with exactly

Re: [Paraview] [EXTERNAL] Re: background color not saved in state

2017-12-05 Thread Scott, W Alan
Cory, I've replicated this one. It is still in master. I wrote it up a while ago here: https://gitlab.kitware.com/paraview/paraview/issues/16879. I will update the bug with exactly how to replicate. Alan > -Original Message- > From: ParaView [mailto:paraview-boun...@paraview.org] On

Re: [Paraview] background color not saved in state

2017-12-05 Thread Heiland, Randy
Strange. I just did the same steps and when I reload, it momentarily flashes the background in black (as I’d saved it), but then switches to white. ParaView-5.4.1-Qt5-OpenGL2-MPI-OSX10.8-64bit.dmg > On Dec 5, 2017, at 8:58 AM, Cory Quammen wrote: > > Hmm, I can't

Re: [Paraview] cygwin installation

2017-12-05 Thread Ben Boeckel
On Tue, Dec 05, 2017 at 10:20:50 +1300, Zohar Levi via ParaView wrote: > To be more specific, I'm building paraview 5.4.1 (gcc on cygwin), and I > get the following errors: > > $ make > [� 0%] Built target vtkWrappingTools > [� 0%] Built target vtkWrapHierarchy > [� 0%] Building CXX object >

Re: [Paraview] background color not saved in state

2017-12-05 Thread Cory Quammen
Hmm, I can't reproduce with the following: * Start ParaView * Add Wavelet * Change background color. * Save state, reset the session, and reload the state. Can you give step-by-step instructions for how to reproduce? By the way, if you wish to discuss in the issue tracker, the original Mantis

Re: [Paraview] Optimus and Windows 10

2017-12-05 Thread Aron Helser
Yes, that Intel driver bug is known to affect ParaView: https://gitlab.kitware.com/paraview/paraview/issues/17499 Regards, Aron On Tue, Dec 5, 2017 at 6:40 AM, Jonathan Borduas < jonathan.bord...@caboma.com> wrote: > Was the laptop running with the intel gpu ? If so, it might be related to > an

[Paraview] background color not saved in state

2017-12-05 Thread Heiland, Randy
Is this the expected behavior? Related: https://www.paraview.org/Bug/bug_relationship_graph.php?bug_id=8722=relation thanks, Randy ___ Powered by www.kitware.com Visit other Kitware open-source projects at

Re: [Paraview] Optimus and Windows 10

2017-12-05 Thread Jonathan Borduas
Was the laptop running with the intel gpu ? If so, it might be related to an Intel driver bug that was reported on the QT and Intel websites. https://bugreports.qt.io/browse/QTBUG-40485 https://software.intel.com/en-us/node/744153 Jonathan Borduas _ From: Paul Melis

Re: [Paraview] Optimus and Windows 10

2017-12-05 Thread Dani Schmid
Hi, I have the same problem on my laptop. Same kind of setup, i.e. integrated Intel and dedicated GeForce graphics card. 'will check if your solution also solves it here. Cheers, Dani On Tue, Dec 5, 2017 at 10:06 AM, Paul Melis wrote: > Hi, > > In our paraview course

[Paraview] Optimus and Windows 10

2017-12-05 Thread Paul Melis
Hi, In our paraview course two weeks ago we had a student that had trouble running Paraview 5.4.1 (official windows 64-bit binaries) under windows 10. The symptoms were that the main menu bar was invisible and that the mouse cursor did not match up with the position of the click event,

Re: [Paraview] cygwin installation

2017-12-04 Thread Zohar Levi via ParaView
To be more specific, I'm building paraview 5.4.1 (gcc on cygwin), and I get the following errors: $ make [� 0%] Built target vtkWrappingTools [� 0%] Built target vtkWrapHierarchy [� 0%] Building CXX object VTK/Utilities/KWSys/vtksys/CMakeFiles/vtksys.dir/EncodingCXX.cxx.o

Re: [Paraview] ERROR: Cannot read points array from Points in piece 0. The data array in the element may be too short.

2017-12-04 Thread Utkarsh Ayachit
There should be 10137 (3379*3) values in the "Points" array, looks like there are only 10117. Utkarsh On Mon, Dec 4, 2017 at 2:25 PM, Salazar De Troya, Miguel wrote: > I am trying to open these two files, which are both similar. They are the > result of the same

[Paraview] ERROR: Cannot read points array from Points in piece 0. The data array in the element may be too short.

2017-12-04 Thread Salazar De Troya, Miguel
I am trying to open these two files, which are both similar. They are the result of the same simulation, but with different parameters. For some reason, I can open the first, but not the second one. I am attaching them here (could not attach them to the email)

[Paraview] Problem loading of properties from .pvtr

2017-12-04 Thread Hector E Barrios Molano
Hi All, I am loading a .pvtr file into paraview it contains TIME and CYCLE within the definition of each .vtr file and a bunch of DataArray properties. When I load the .pvtr file I cannot visualize any property associated with Cell/Points. However, when I load the separately the .vtr

Re: [Paraview] More fonts?

2017-12-04 Thread Quentin d'Avout
Timely request, then! Thanks Joachim! On Mon, Dec 4, 2017 at 10:24 AM, Joachim Pouderoux < joachim.pouder...@kitware.com> wrote: > Quentin, > > It is not possible until my recent change in ParaView master code that > allows to specify > a font described in a TrueType file. > See

Re: [Paraview] More fonts?

2017-12-04 Thread Joachim Pouderoux
Quentin, It is not possible until my recent change in ParaView master code that allows to specify a font described in a TrueType file. See https://gitlab.kitware.com/paraview/paraview/merge_requests/2024. You might want to download the nightly build binaries to give it a try. Best, Joachim

[Paraview] More fonts?

2017-12-04 Thread Quentin d'Avout
Hi all, I'm using 5.0.1, and would like to use other fonts than the default Arial/Courrier/Times. Any way to add other fonts? Thanks Quentin ___ Powered by www.kitware.com Visit other Kitware open-source projects at

Re: [Paraview] [EXT] RE: Python Annotations

2017-12-04 Thread Quentin d'Avout
Precisely. Thank you Allie! On Wed, Nov 29, 2017 at 7:09 AM, Allie Vacanti wrote: > Is this what you're looking for? > > https://blog.kitware.com/writing-equations-in-paraview-4-0-with-mathtext/ > > On Tue, Nov 28, 2017 at 8:23 PM, Quentin d'Avout

[Paraview] Visualize point cloud UDP stream

2017-12-03 Thread FIXED-TERM Eberle Lukas (CC-PS/ECL5)
To whom it may concern, I would like to visualize a real-time point cloud stream in Paraview. Up to now I have implemented a "Programmable Source" in Paraview which receives a point cloud stream over UDP. The output of the source is selected as vtkTable. I process the source with a Table To

Re: [Paraview] Writing XML VTK Binary files from C++

2017-12-03 Thread Stegmeier, Nicholas
Hello again Mark, I have been working on implementing the binary "inline" option for my VTK XML files. I looked through the OpenFOAM code that you suggested and am having trouble interpreting it. Would you be able to give me a hint as to where I should be looking in foamVtkBase64Layer? For

[Paraview] need a small working source code for testing OpenFOAM reader

2017-12-03 Thread SeongMo
Hi, I am trying to work on the vtkOpenFOAMReader class to add a support for decomposedBlockData introduced in OpenFOAM 5.x. I need a small testing code which should invoke OpenFOAMReader's requestInformation and requestData function so check and trace how the reader is working. But I am

Re: [Paraview] post-process of CFL3D result with surfaces in paraview?

2017-12-02 Thread Stephen Wornom
I have a different code but had the same problem that I resolved by adding an additional variable which sets value 0 at interior points and a different values for each surface, for example, -3 for the wing surface points. Then I use "extract" to visualize the different surfaces. Hope this

Re: [Paraview] Python in the VR Build

2017-12-02 Thread Ken Martin
I believe the nightly PV builds now include the OpenVR plugin on windows. I have not had a chance to try it but it might do the trick. On Sat, Dec 2, 2017 at 5:07 PM, Bane Sullivan wrote: > Is it possible to release a Python compatible version of the VR build of > ParaView?

[Paraview] Python Programmable Filter Time Series Source

2017-12-02 Thread Bane Sullivan
Here is an example of a programmable filter vis XML that I want to simply print off the various file names or give me and ability to read the file series. I have this python programmable filter set up to work when I click File->Open in ParaView. I have the ability to then chose file series from

[Paraview] Python in the VR Build

2017-12-02 Thread Bane Sullivan
Is it possible to release a Python compatible version of the VR build of ParaView? I am working on a project where I am dynamically linking geophysical processing code to ParaView for near-real time visualizations. Having Python included in the VR build would be a huge benefit! This would also

[Paraview] python exodus parsing segaults

2017-12-02 Thread Julian A. Quick
Hello All, I wrote a python script using the Paraview ExodusIIReader to convert exodus II files into csv's. The script usually runs successfully, but sometimes I get a segfault. Am I missing something? How might I be able to better handle memory in this code? I tried pasting the reset function I

Re: [Paraview] particle traces from point data

2017-12-01 Thread Alex Barrie
That got it, thanks! Alex On Fri, Dec 1, 2017 at 3:59 PM, Joachim Pouderoux < joachim.pouder...@kitware.com> wrote: > Alex, > > The problem appears because the output of this Visit-based reader is a > multiblock. > > Here is a workaround: apply a *Merge Block* filter on your input data, > then

Re: [Paraview] particle traces from point data

2017-12-01 Thread Joachim Pouderoux
Alex, The problem appears because the output of this Visit-based reader is a multiblock. Here is a workaround: apply a *Merge Block* filter on your input data, then apply the *Temporal Particles To Pathline* filter. Best, *Joachim Pouderoux*, PhD *Technical Expert - Scientific Computing Team*

Re: [Paraview] unable to RGB voxel from tiff/jpeg slice to volume

2017-12-01 Thread Cory Quammen
On Thu, Nov 30, 2017 at 9:17 PM, joe kozak wrote: > that worked...so why cant IsoVolume work on that type of dataset? Can i > not carve out a volume base on some range of Reds or Greens ? What about > based on some union of each channel? I'm not sure what you are

[Paraview] PV client-server: browsing remote files

2017-12-01 Thread Robert Sawko
Dear ParaViewers, I am trying to use Python shell in Client-Server mode, but I am running into some difficulties. How can I actually browse the remote directories. I tried to use the `os` module, but that obviously ends up being all local. Here's a minimal example of what I am trying to achieve.

Re: [Paraview] particle traces from point data

2017-12-01 Thread Alex Barrie
I am attaching the first input file here. Each file has an incremented number in the filename and then I load them all at once using the Point3D reader. I just go to open and select the group, I don't do anything special to load them. Paraview detects them all as part of the same group, and I can

Re: [Paraview] particle traces from point data

2017-12-01 Thread Joachim Pouderoux
Alex, Again, could you specify how you are loading your files? If you open them as a file series, then your data should be considered as temporal and the filter should work. See https://www.paraview.org/Wiki/Animating_legacy_VTK_file_series Best, *Joachim Pouderoux*, PhD *Technical Expert -

Re: [Paraview] Writing XML VTK Binary files from C++

2017-12-01 Thread Stegmeier, Nicholas
Hello, Thank you both for your advice. I will be sure to pursue both options and see if I can get them working. Thank you again, Nicholas Stegmeier From: David E DeMarle Sent: Friday, December 1, 2017 8:35:45 AM To: Mark Olesen Cc:

Re: [Paraview] particle traces from point data

2017-12-01 Thread Alex Barrie
I was able to find this thread that mentions that maybe the input data set needs to have a DATA_TIME_STEPS key, but I am not sure how to specify this with the point3d data. https://public.kitware.com/pipermail/paraview/2016-February/036211.html Is there a way just to use whatever mechanism the

[Paraview] undefined references to EGL library functions when using NVIDIA's libEGL_nvidia.so.384.90

2017-12-01 Thread Christopher Paolini
Greetings, I'm trying to build pvserver with GPU headless rendering capability and am getting undefined references to EGL library functions when using NVIDIA's libEGL_nvidia.so.384.90 library. My cmake build specification is: cmake ../paraview \ -DVTK_USE_EGL=ON \ -DVTK_OPENGL_HAS_EGL=ON \

Re: [Paraview] Writing XML VTK Binary files from C++

2017-12-01 Thread David E DeMarle
Another approach is to use VTK itself to write the files. Since VTK 6 it is straightforward to configure a VTK build consisting of only the IO/ParallelXML module and its required dependencies. To do so, in cmake, turn of testing, all groups and turn on Module_vtkIOParallelXML, and you should be

Re: [Paraview] Integrate variable filter

2017-12-01 Thread Andy Bauer
You may also want to look at the Cell Size filter which has the advanced option to globally sum the values. The Integrate Variable filter can give unexpected results with mixed dimension elements since it will integrate all 0D, 1D, 2D and 3D cells. On Fri, Dec 1, 2017 at 5:02 AM, Andrew

Re: [Paraview] Integrate variable filter

2017-12-01 Thread Andrew
Hello. For calculationg volumes and areas, the "Cell Data" attribute type of Integrate variables filter is usable. You don't need to define additional constant field for this. I checked it now and it seems to give the correct domain volume (554 m3 in SolidWorks, 557 m3 in ParaView). The error may

[Paraview] Integrate variable filter

2017-12-01 Thread Lionel Wilhelm
Dear Paraviewers, I'm trying to compute a closed volume in paraview. For that purpose, I define a constant field with value 1 on the domain and use the integrate filter. Unfortunately the result does not seem to be correct. Attached a screenshot of the GUI where I try to compute the volume of

Re: [Paraview] Writing XML VTK Binary files from C++

2017-11-30 Thread Mark Olesen
When you say "writing binary", you need to distinguish between three possibilities. 1) writing binary "inline" (actually base64 encoded) 2) writing binary "append" (actually base64 encoded) 3) writing raw binary "append" (really raw binary) Since you already have ASCII writing working and its

Re: [Paraview] unable to RGB voxel from tiff/jpeg slice to volume

2017-11-30 Thread Cory Quammen
Joe, This is more of a question for the ITK discussion forum [1], but I'll give you a potential solution here. The problem is that typedef itk::Image ImageType; declares a 3-dimensional scalar-valued image, not a 3-component (RGB) 2-dimensional image. To declare an RGB ITK image, try

[Paraview] unable to RGB voxel from tiff/jpeg slice to volume

2017-11-30 Thread joe kozak
grabbed frames from a standard youtube color video via ffmpeg used something like $./imageSeriesToVolume -sz 1.0 -o test.vtk -i input*.jpeg loaded test.vtk in paraview 5.0.1 and also paraview 5.4.1 on information tab i see: scalars unsigned char [33,239] "Map Scalars" on or off I get no

Re: [Paraview] post-process of CFL3D result with surfaces in paraview?

2017-11-30 Thread kenichiro yoshimi
Hi Cheng, You can specify the i-j-k min/max indices in a structured grid dataset to extract curviliner grid as wall using the vtkExtractGrid filter through Programmable. Specifically, after adding Programmable Filter and Changing the output type to vtkPolyDatat, there is something like the

[Paraview] Writing XML VTK Binary files from C++

2017-11-30 Thread Stegmeier, Nicholas
Hello, I am new to Paraview and C++ coming from a mostly mathematics background. I am emailing to get resources or help on writing binary XML VTK files from C++. I have finally succeeded in using the ASCII XML VTK format for a 2D rectilinear CFD application. My ".pvtr" file is shown below.

Re: [Paraview] Assemble Variables into Tensor

2017-11-30 Thread Utkarsh Ayachit
You're most welcome :). Utkarsh On Thu, Nov 30, 2017 at 10:20 AM, Nicholas Richmond wrote: > Hi Utkarsh, > > Using the script you wrote with the Programmable Filter does the job nicely! > Thanks so much for going above and beyond to help me assemble the arrays >

Re: [Paraview] Assemble Variables into Tensor

2017-11-30 Thread Nicholas Richmond
Hi Utkarsh, Using the script you wrote with the Programmable Filter does the job nicely! Thanks so much for going above and beyond to help me assemble the arrays into a tensor. Programmable Filter never occurred to me and I am now looking forward to exploring Chapter 13 of the Paraview Guide to

Re: [Paraview] particle traces from point data

2017-11-30 Thread Alex Barrie
Yes, I have one file per timestep and each file is a list of points, X, Y, Z, C with one point per line. I am loading it with the 'Point3D' input. Thanks! Alex On Thu, Nov 30, 2017 at 9:18 AM, Joachim Pouderoux < joachim.pouder...@kitware.com> wrote: > Alex, > > Could you specify how is your

Re: [Paraview] particle traces from point data

2017-11-30 Thread Joachim Pouderoux
Alex, Could you specify how is your data split over time? Do you have one file per timestep? How do you load your data with ParaView? Joachim *Joachim Pouderoux*, PhD *Technical Expert - Scientific Computing Team* *Kitware SAS * 2017-11-30 9:55 GMT-04:00 Alex Barrie

Re: [Paraview] particle traces from point data

2017-11-30 Thread Alex Barrie
Thanks, I see it now - I missed it because it wasn't in the "Temporal" tab. When I apply this filter, however, I get an error about a missing DATA_TIME_STEPS information key. Is this something I can specify or does it have to be in the raw data somehow? Thanks, Alex On Wed, Nov 29, 2017 at

Re: [Paraview] Best file fomat for big data

2017-11-30 Thread Chris Richardson
I would recommend using xdmf (www.xdmf.org). It works well for large parallel datasets, and supports the same structures as vtk.ChrisOn 30 Nov 2017 10:13, a...@yandex.ru wrote:Hi! I just finish my own CFD simulation on 256 processors. The program made graphics output in 2000 time points. So large

Re: [Paraview] Best file fomat for big data

2017-11-30 Thread Mark Olesen
A few months back there was a suggestion on the mailing list that you can apparently write a single vtk geometry and then use something like "map data" to load the new, updated fields (perhaps Ken posted it? - don't know any other details). I agree that these vtk format limitations can be

[Paraview] Best file fomat for big data

2017-11-30 Thread as92
Hi! I just finish my own CFD simulation on 256 processors. The program made graphics output in 2000 time points. So large number of outputs I need to prepare smooth animation. I use XML VTK ascii format. So I have now 2000 pvtu files and 2000*256=512000 vtu files. I have problems with such big

[Paraview] Registered texture images

2017-11-30 Thread postgurke
Hello,   I am using python scripts to import data into a ParaView (5.4.1) session. In order to keep the texture images in a saved state, I am registering them:   pathToTextureImage='path\\imagefile' Display = Show(testvtp, renderView1) Display.SetRepresentationType('Surface') texProxy =

Re: [Paraview] Assemble Variables into Tensor

2017-11-29 Thread Utkarsh Ayachit
Nick, You can use the *Programmable Filter* instead with something like the following script as the *Script*: from paraview.vtk.numpy_interface import dataset_adapter as dsa import numpy def make_tensor(xx,yy,zz, xy, yz, xz): t = numpy.vstack([xx,yy,zz,xy, yz,

[Paraview] Assemble Variables into Tensor

2017-11-29 Thread Nicholas Richmond
Greetings, I have a vtk Polygonal Mesh with six separate arrays (sigma_xx, sigma_yy, sigma_zz, sigma_xy, sigma_yz, sigma_xz). I'd like to assemble these into a tensor so that I may apply the Tensor Glyph filter. After reading that the paraview.simple.TensorGlyph

Re: [Paraview] Is anyone using Octree Fractal (vtkHyperOctreeFractalSource)?

2017-11-29 Thread Allie Vacanti
Merge requests are up for this: VTK: https://gitlab.kitware.com/vtk/vtk/merge_requests/3644 PV: https://gitlab.kitware.com/paraview/paraview/merge_requests/2062 On Tue, Nov 28, 2017 at 3:35 PM, Allie Vacanti wrote: > Unless there is a reason not to, we will be

Re: [Paraview] [Paraview-developers] ANN: vtk.js, an Open-Source Toolkit for SciVis on the Web

2017-11-29 Thread Will Schroeder
Note that vtk.js is a relatively young project. That means if you are anxious to contribute to an open source community here's a chance to get in on the ground floor; we can certainly use your help. Give yourself the holiday gift of contributing to an OS platform :-) On Tue, Nov 28, 2017 at

Re: [Paraview] vtkDiscreteMarchingCubes point/cell arrays from XML-PV plugin

2017-11-29 Thread Joachim Pouderoux
Hi Roman, I guess we should add some SetName() calls in the code of vtkDiscreteMarchingCubes. Feel free to submit a merge request with this very small change. In the meanwhile, what about adding a Programmable Filter on the output of this filter and do something like: inputpds =

[Paraview] post-process of CFL3D result with surfaces in paraview?

2017-11-29 Thread 程迪
Hi paraviewers, I am using paraview to render results in CFL3D, which is in Plot3D format, including `abc.xyz` grid file and `abc.q` solution file. Besides, I have a boundary condition file `abc.xyz.fvbnd` in FieldView 1.3 format which was generated by grid pre-processor. My problem is: How to

Re: [Paraview] particle traces from point data

2017-11-29 Thread Joachim Pouderoux
Alex, I think here the filter "Temporal Particles to Pathlines" should do the trick. Best, Joachim *Joachim Pouderoux*, PhD *Technical Expert - Scientific Computing Team* *Kitware SAS * 2017-11-29 14:33 GMT-04:00 Alex Barrie : > Hi, > > I have

[Paraview] particle traces from point data

2017-11-29 Thread Alex Barrie
Hi, I have animated particles which are imported from point data (x,y,z). I want to add a particle trace, but I am not sure what to put for the 'seed'. I am not using a vector field, but rather just a list of particle positions that updates over time. How can I just add a trace to each particle

Re: [Paraview] FEM

2017-11-29 Thread Utkarsh Ayachit
Paul, Welcome to the community! If your data is not in one of the large number of formats ParaView already supports, using Python to read an map to VTK data model sounds like a reasonable strategy. The "Programmable Source" would be the way to go. The ParaView Guide has examples that should help

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