Bug#765511: hdf5: Resource exhaustion in HDF5 1.8.13

2014-10-17 Thread Sylvestre Ledru
On 17/10/2014 18:55, Jim Garrison wrote: > On 10/17/2014 12:49 AM, Gilles Filippini wrote: >> Could you please gite a try at the not yet uploaded release >> 1.8.13+docs-15 I've just pushed into the git repo (branch master)? >> Thanks in advance, _g. > > Thanks so much for looking into this and int

Bug#746955: it is not possible to build a serial version anymore

2014-05-04 Thread Sylvestre Ledru
severity 746955 normal thanks On 04/05/2014 11:52, Thorsten Alteholz wrote: > > some time ago there was a package libhdf5-serial-dev that I could use > to build a serial version of package meep. > Nowadays this package was replaced by libhdf5-dev and the description > still says: > This package c

Bug#740613: libhdf5-7: Please include support for compression with libaec

2014-03-18 Thread Sylvestre Ledru
On 03/03/2014 17:00, Thomas Jahns wrote: > Package: libhdf5-7 > Severity: wishlist > > Dear Maintainer(s), > > since SZIP is essentially non-free, although the corresponding patents are no > longer, and our share-holders wanted to use it in other libraries (libcdi) for > another file format (GRIB),

Bug#738844: libhdf5-doc does not contain documentation, only examples

2014-02-15 Thread Sylvestre Ledru
On 15/02/2014 16:53, Gilles Filippini wrote: > Hi, > > Francesco P. Lovergine wrote, On 15/02/2014 15:46: >> On Thu, Feb 13, 2014 at 01:30:42PM +0100, Enrico Zini wrote: >>> Package: libhdf5-doc >>> Version: 1.8.12-9 >>> Severity: normal >>> >>> Hello, >>> >>> thank you for packaging hdf5. >>> >>>

Bug#732202: libhdf5-openmpi-dev: pathways for mpi.h not picked up with the linked include

2013-12-25 Thread Sylvestre Ledru
On 25/12/2013 22:21, Marc J. Driftmeyer wrote: > Could do that, but that doesn't address the fundamental pathway flaw. Using mpicc & mpicxx is the MPI pathway when dealing with MPI code... Sylvestre ___ Pkg-grass-devel mailing list Pkg-grass-devel@lists

[SCM] netcdf branch, master, updated. upstream/4.1.3-41-g4438ce4

2013-10-09 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit fcc634e1ad54c45e34d62970157695d353bf42c6 Author: Sylvestre Ledru Date: Wed Oct 9 14:36:54 2013 +0200 * Team upload * Standards-Version updated to 3.9.4 * Rebuild for the new upstream release of gfortran (that it just

[SCM] netcdf branch, master, updated. upstream/4.1.3-41-g4438ce4

2013-10-09 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 4438ce467ffaf0684a63a5e1dfc873129619c940 Author: Sylvestre Ledru Date: Wed Oct 9 14:50:57 2013 +0200 Fix warning description-synopsis-starts-with-article diff --git a/debian/changelog b/debian/changelog index e7e0077

[SCM] hdf5 branch, master, updated. upstream/1.8.7-174-g75bc680

2013-09-29 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 75bc680716722932e52bb58c056954db7783 Author: Sylvestre Ledru Date: Sun Sep 29 13:01:56 2013 +0200 Forgot to update debian/control.in ... diff --git a/debian/changelog b/debian/changelog index 1c5dc6a..cb03298 100644

[SCM] hdf5 branch, master, updated. upstream/1.8.7-173-g0de8aa4

2013-09-29 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 0de8aa41f4cfbd945568ce9d928622f3c2e01628 Author: Sylvestre Ledru Date: Sun Sep 29 11:13:20 2013 +0200 * Remove the debian version from libhdf5-7.symbols * Fix lintian warning unused-shlib-entry-in-control-file libh5test

[SCM] hdf5 branch, master, updated. upstream/1.8.7-172-gdbd1637

2013-09-29 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit dbd1637f5f9c8036d8bcc8e31c3a4ac1e9f622a4 Author: Sylvestre Ledru Date: Sun Sep 29 10:01:59 2013 +0200 Fix error in the chrpath removal diff --git a/debian/rules b/debian/rules index 40e4764..0ad38c1 100755 --- a/debian

[SCM] hdf5 branch, master, updated. upstream/1.8.7-171-g5b80ac3

2013-09-28 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 5b80ac36d324ce3f7e39a84141e42d92be1f5c50 Author: Sylvestre Ledru Date: Sat Sep 28 18:55:42 2013 +0200 Remove rpath diff --git a/debian/changelog b/debian/changelog index 08e6763..9e1d68e 100644 --- a/debian/changelog +++ b

[SCM] hdf5 branch, master, updated. upstream/1.8.7-170-gf12cd8d

2013-09-28 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit f12cd8dcf3157f6d69032357eb371e49d06bbab0 Author: Sylvestre Ledru Date: Sat Sep 28 16:18:22 2013 +0200 also import -3 diff --git a/debian/changelog b/debian/changelog index 33eaadd..08e6763 100644 --- a/debian/changelog

[SCM] hdf5 branch, master, updated. upstream/1.8.7-169-gbe5239c

2013-09-28 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit be5239c07517d40f4e278612dffa1d0806852f3e Author: Sylvestre Ledru Date: Sat Sep 28 16:13:54 2013 +0200 * Fix a miscompilation issue with gcc 4.8 (Closes: #721805) * Rebuild to fix the mod gfortran issue (Closes: #687127

Re: New version of libedit in experimental: tests welcome

2013-09-26 Thread Sylvestre Ledru
Hello, The release in experimental of libedit received some good feedbacks (btw, thanks to Guillem Jover). I am planning to upload it soon in the archive. So, if you haven't tested libedit yet, please go ahead! Thanks! Cheers, Sylvestre On 02/08/2013 19:34, Sylvestre Ledru wrote: &g

Re: [bug-report] hdf5 misbehaves when compiled with gcc 4.8.0

2013-09-03 Thread Sylvestre Ledru
Hello, On 04/09/2013 02:51, Andrea Bedini wrote: > Hi, > > it's too hard to figure out how to send a proper bug report :) I'll > just write an email. > > It seems that on some architectures hdf5 has issues when compiled with > gcc 4.8.0 and newer compilers. > Ouch. Thanks for investigating it. Le

[SCM] hdf5 branch, master, updated. upstream/1.8.7-168-gd234454

2013-07-03 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit d2344548466bdb19f648750b6bc50486dcff9338 Author: Sylvestre Ledru Date: Wed Jul 3 13:21:32 2013 +0200 Missing close bug + refresh of the patch diff --git a/debian/changelog b/debian/changelog index 27bd5d4..a69da25 100644

[SCM] hdf5 branch, master, updated. upstream/1.8.7-167-gc5c4cfb

2013-07-03 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit ba11285a6c79dc9233fbf535c4e83e56fd87d8d8 Author: Sylvestre Ledru Date: Wed Jul 3 11:49:31 2013 +0200 * Fix the FTBFS under ia64 (Closes: #711777) * Disable openmpi on m68k, too (Closes: #695607) diff --git a/debian

[SCM] hdf5 branch, master, updated. upstream/1.8.7-167-gc5c4cfb

2013-07-03 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit c5c4cfb848f20d82b7044acef4c675f8a978a164 Author: Sylvestre Ledru Date: Wed Jul 3 11:54:02 2013 +0200 Update the symbol list under PowerPC diff --git a/debian/changelog b/debian/changelog index 4560490..27bd5d4 100644 --- a

[SCM] hdf5 branch, master, updated. upstream/1.8.7-165-gc52b044

2013-07-02 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 101c2671db75c0017040f0d33788e54b422493dd Author: Sylvestre Ledru Date: Tue Jul 2 16:38:27 2013 +0200 match upstream tarball diff --git a/src/H5Tconv.c b/src/H5Tconv.c index c5a24c4..4e8a88d 100644 --- a/src/H5Tconv.c +++ b

[SCM] hdf5 branch, master, updated. upstream/1.8.7-165-gc52b044

2013-07-02 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 06f835a3f2275d96b20a5345cef6017f102a8dda Author: Sylvestre Ledru Date: Tue Jul 2 16:38:40 2013 +0200 refresh of the patches diff --git a/debian/patches/path_max.diff b/debian/patches/path_max.diff index d8d3466..2e2b0fc

[SCM] hdf5 branch, master, updated. upstream/1.8.7-165-gc52b044

2013-07-02 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit c52b044dffc7fbc350b61ce8538c61885ae9883c Author: Sylvestre Ledru Date: Tue Jul 2 17:31:15 2013 +0200 Refresh + prepare the upload diff --git a/debian/changelog b/debian/changelog index 5e813f3..00268ab 100644 --- a/debian

[SCM] hdf5 branch, master, updated. upstream/1.8.7-162-gfdfc778

2013-07-02 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit fdfc778c568d85a48386a8c55e75c7a72c0c8141 Merge: 799396b3ad5c097e6c14bfd8939b603f113abefc 34469bba0c80bf463515355f18522748954eceb1 Author: Sylvestre Ledru Date: Tue Jul 2 15:44:17 2013 +0200 Merge branch 'master'

[SCM] hdf5 branch, master, updated. upstream/1.8.7-162-gfdfc778

2013-07-02 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 799396b3ad5c097e6c14bfd8939b603f113abefc Author: Sylvestre Ledru Date: Tue Jul 2 15:41:16 2013 +0200 * Rollback upstream change from soname 7 => 8. They only removed two functions which were unused and bu

[SCM] hdf5 branch, master, updated. upstream/1.8.7-160-g34469bb

2013-07-02 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 34469bba0c80bf463515355f18522748954eceb1 Author: Sylvestre Ledru Date: Tue Jul 2 15:41:16 2013 +0200 * Rollback upstream change from soname 7 => 8. They only removed two functions which were unused and bu

[SCM] hdf5 branch, master, updated. upstream/1.8.7-159-g4e449de

2013-06-21 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 4e449defb555e7d586ec526bea78a4b13b877ec6 Author: Sylvestre Ledru Date: Fri Jun 21 17:25:12 2013 +0200 Update of the symbol list with the 1.8.11 release diff --git a/debian/libhdf5-8.symbols b/debian/libhdf5-8.symbols index

[SCM] hdf5 branch, master, updated. upstream/1.8.7-158-g4002cb2

2013-06-21 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 4002cb28f4ef57dcae5a24a26fd07c595649600e Author: Sylvestre Ledru Date: Fri Jun 21 14:40:51 2013 +0200 This new release will require a transition (7 => 8) diff --git a/debian/changelog b/debian/changelog index a3a8

[SCM] hdf5 branch, master, updated. upstream/1.8.7-157-g6fc6370

2013-06-21 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 6fc637044dbfb34074435bbab62295e0bc3f7927 Author: Sylvestre Ledru Date: Fri Jun 21 14:06:59 2013 +0200 final refresh diff --git a/debian/patches/path_max.diff b/debian/patches/path_max.diff index 11bff97..d8d3466 100644

[SCM] hdf5 branch, master, updated. upstream/1.8.7-156-gd214903

2013-06-21 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit d2149036ff8719824f67dcb7105ca3648878 Author: Sylvestre Ledru Date: Fri Jun 21 13:54:40 2013 +0200 refresh of the patches diff --git a/debian/patches/path_max.diff b/debian/patches/path_max.diff index 11e2849..11bff97

[SCM] hdf5 branch, master, updated. upstream/1.8.7-155-gdd085b6

2013-06-21 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit dd085b64a57d365d0c1ce0340099ae479f018db5 Author: Sylvestre Ledru Date: Fri Jun 21 13:50:45 2013 +0200 New upstream release diff --git a/debian/changelog b/debian/changelog index 579f339..a3a8cb4 100644 --- a/debian

[SCM] hdf5 branch, master, updated. upstream/1.8.7-154-ga5df9f7

2013-06-21 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit a5df9f794cb96991748ede94f06d004e6fb7318c Author: Sylvestre Ledru Date: Fri Jun 21 13:50:15 2013 +0200 * Enable Multi-Arch: + Bump debhelper dependency to 8.1.3. + Add Multi-Arch:same markers and ${misc:Pre

[SCM] grits branch, master, updated. upstream/0.7-41-gf0ccd77

2013-06-20 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit f0ccd7746aa6b788ce1c6182e548ad553cd6d11f Author: Sylvestre Ledru Date: Thu Jun 20 11:40:24 2013 +0200 Merge the changelog item diff --git a/debian/changelog b/debian/changelog index 5532a71..72603ca 100644 --- a/debian

[SCM] hdf5 branch, master, updated. upstream/1.8.7-149-g29fafe7

2013-04-11 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 29fafe7818d7d9fc5d6a8ba1e69e8111c254eb11 Author: Sylvestre Ledru Date: Thu Apr 11 18:44:15 2013 +0200 fix a mistake in the symbol declaration diff --git a/debian/libhdf5-7.symbols b/debian/libhdf5-7.symbols index 53f8c91

[SCM] hdf5 branch, master, updated. upstream/1.8.7-149-g29fafe7

2013-04-11 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 455c11050d30302c93b0b35e7f7ff95ea6446dd8 Author: Sylvestre Ledru Date: Thu Apr 11 18:43:36 2013 +0200 * Remove libhdf5-doc.doc-base (html doc is no longer provided) diff --git a/debian/changelog b/debian/changelog index

[SCM] hdf5 branch, master, updated. upstream/1.8.7-149-g29fafe7

2013-04-11 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 0736997abcbfc96053765cd7ad33355231933bb0 Author: Sylvestre Ledru Date: Thu Apr 11 15:43:57 2013 +0200 Fix the FTBFS on powerpc, powerpcspe, and ppc64 Many thanks to Hiroyuki Yamamoto & Roland Stigge (Closes: #70

[SCM] hdf5 branch, master, updated. upstream/1.8.7-149-g29fafe7

2013-04-11 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 1b56d3bf1a7c5d2e8d4c800abc7c1ac049bfd747 Merge: 100349a66742ea713d1db9d863ac7f5ca8cd7a35 e8d67662839e5c940b21d9b9bc5a765d843241ac Author: Sylvestre Ledru Date: Mon Jan 28 17:24:27 2013 +0100 Merge branch 'master'

[SCM] hdf5 branch, master, updated. upstream/1.8.7-149-g29fafe7

2013-04-11 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 100349a66742ea713d1db9d863ac7f5ca8cd7a35 Author: Sylvestre Ledru Date: Wed Nov 28 14:05:19 2012 +0100 Finaly commit it diff --git a/debian/control.in b/debian/control.in index 7257fde..870762d 100644 --- a/debian/control.in

Bug#703439: H5Cpp.h missing in libhdf5-openmpi-dev and libhdf5-mpich2-dev?

2013-04-11 Thread Sylvestre Ledru
On 19/03/2013 17:42, Sylwester Arabas wrote: > Package: libhdf5-mpi-dev > Version: 1.8.10-patch1-1~exp2 > > Hello, > > The libhdf5-dev package contains the /usr/include/H5Cpp.h file (the C++ > API header for HDF5). It is not provided by any of the > libhdf5-openmpi-dev and libhdf5-mpich2-dev pack

Bug#686926: [Pkg-octave-devel] Bug#686926: liboctave-dev: creates broken .oct files when the OpenMPI flavor of HDF5 (libhdf5-openmpi-dev) is installed

2013-04-08 Thread Sylvestre Ledru
Add HDF5 upstream contact address. On 08/04/2013 15:17, Jordi Gutiérrez Hermoso wrote: > On 4 April 2013 19:54, Bradley M. Froehle wrote: >> If only there was a way for the different variants of HDF5 to be >> simultaneously installable… > > I think this is the real problem,and it goes way up to

Bug#703340: hdf5: Some upgrade scenarios does not fully work

2013-03-18 Thread Sylvestre Ledru
Package: hdf5 Version: 1.8.8-9.1 Severity: important Hello, #667599 and #667526 have been partly fixed by the upload of version 1.8.8-9.1. However, as detailed here: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=667599#86 There are still some upgrades scenarios which are not providing the opti

Bug#667526: hdf5: apt does not find an upgrade path from squeeze

2013-03-17 Thread Sylvestre Ledru
On 17/03/2013 21:12, Michael Gilbert wrote: > Is there any reason not to apply Andreas' patch to fix this now? Yes, see message #49: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=667526#49 I can still apply it if the release team thinks that it is better than the current state. Sylvestre

Bug#667599: dolfin-dev: fails to upgrade from squeeze - apt does not find an upgrade path

2013-03-04 Thread Sylvestre Ledru
On 27/02/2013 13:11, Andreas Beckmann wrote: > On 2013-02-27 09:46, Ana Guerrero wrote: >> Bad news, it doesn't fully work. A couple of cases: [...] > Having real metapackages libhdf5-serial, libhdf5-openmpi, libhdf5-mpich2 > that depend on their corresponding libhdf5-foo (=$binvers) (and the libr

Bug#667599: dolfin-dev: fails to upgrade from squeeze - apt does not find an upgrade path

2013-02-26 Thread Sylvestre Ledru
On 25/02/2013 11:44, Andreas Beckmann wrote: > Followup-For: Bug #667599 > Control: tag -1 patch > > Hi, > > after having tested a lot of modifications, I think I found a solution > that provides smoother hdf5 upgrade paths from squeeze. > > As that is primarily an apt bug in squeeze, we need to

Bug#699155: hdf5: dependencies can be satisfied interchangeably with libraries providing different ABIs

2013-01-28 Thread Sylvestre Ledru
tags 699155 help thanks On 28/01/2013 11:04, Ana Guerrero wrote: > > Package: src:hdf5 > Version: 1.8.8-9 > Severity: serious > > In Squeeze there are two virtual packages libhdf5-1.8 and libhdf5-1.8.4, that > allow to install either libhdf5-serial-1.8.4, libhdf5-openmpi-1.8.4, > libhdf5-mpich-1

[SCM] hdf5 branch, master, updated. upstream/1.8.7-144-ge8d6766

2013-01-27 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit e8d67662839e5c940b21d9b9bc5a765d843241ac Author: Sylvestre Ledru Date: Sun Jan 27 11:21:49 2013 +0100 Fix the symbol list diff --git a/debian/changelog b/debian/changelog index a82e568..67fdaf9 100644 --- a/debian/changelog

[SCM] hdf5 branch, master, updated. upstream/1.8.7-143-g797b41d

2013-01-26 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 797b41ddc470c54e9d19c55e601e77e434dc0c56 Author: Sylvestre Ledru Date: Sat Jan 26 12:28:22 2013 +0100 refresh of the patches diff --git a/debian/patches/path_max.diff b/debian/patches/path_max.diff index 367bf9b..68d9ca5

Bug#695607: hdf5: FTBFS: tries to build openmpi module without depending on openmpi

2012-12-10 Thread Sylvestre Ledru
On 10/12/2012 19:57, Thorsten Glaser wrote: > Source: hdf5 > Version: 1.8.8-9 > Severity: serious > Justification: fails to build from source (but built successfully in the past) > > I think the fix is to use an explicit list of architectures > to _en_able openmpi on, rather than disabling it on a

[SCM] hdf5 branch, upstream, updated. upstream/1.8.7-83-gfc3c444

2012-11-28 Thread Sylvestre Ledru
The following commit has been merged in the upstream branch: -- Hierarchical Data Format 5 (HDF5) ___ Pkg-grass-devel mailing list Pkg-grass-devel@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/pkg-grass-devel

[SCM] hdf5 branch, master, updated. upstream/1.8.7-141-g07bb3b7

2012-11-28 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 07bb3b75831d6435094145aecc36e94c9e81fdd8 Author: Sylvestre Ledru Date: Wed Nov 28 13:02:37 2012 +0100 * Support of ppc64 (Closes: #670266) Thanks to Hiroyuki Yamamoto for the patch. * Support of powerpcspe

[SCM] hdf5 branch, master, updated. upstream/1.8.7-140-g4379ffa

2012-11-25 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 4379ffaf76d26d1e1bcbdb60420c23c6264702f7 Author: Sylvestre Ledru Date: Sun Nov 25 11:35:31 2012 +0100 Skip the inclusion of C++ when dealing with parallel HDF5 Thanks to Mike Miller, Rafael Laboissiere & Sebastien Vill

[SCM] hdf5 branch, master, updated. upstream/1.8.7-139-gb94f3ea

2012-11-25 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit b94f3eabbb173689534ba1b589640955f2e15885 Author: Sylvestre Ledru Date: Sun Nov 25 11:02:42 2012 +0100 relax-version-check.patch: don't check the compile time patch version at runtime, this saves us full transitions wh

[SCM] hdf5 branch, master, updated. upstream/1.8.7-138-gda5a487

2012-09-30 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit da5a487b3bcdec0e3fadebb906633dc7b6d1cda6 Author: Sylvestre Ledru Date: Sun Sep 30 17:40:10 2012 +0200 * Use /usr/bin/cc & /usr/bin/c++ for the serial compilation * Enable hardening flags diff --git a/de

[SCM] hdf5 branch, master, updated. upstream/1.8.7-138-gda5a487

2012-09-30 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit ae24787af95ba0127f8883286ff1bf2533a4c5a8 Author: Sylvestre Ledru Date: Sun Sep 30 16:30:28 2012 +0200 Enable hardening flags diff --git a/debian/rules b/debian/rules index 5e1f017..e7e43b9 100755 --- a/debian/rules +++ b

[SCM] hdf5 branch, master, updated. upstream/1.8.7-138-gda5a487

2012-09-30 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit b92d59d6d5b7477a7a7c3a8411bedf65600aa672 Author: Sylvestre Ledru Date: Sun Sep 30 16:30:49 2012 +0200 Use general compiler def instead of hardcoded declaration to gcc diff --git a/debian/rules b/debian/rules index e7e43b9

[SCM] hdf5 branch, master, updated. upstream/1.8.7-133-gf2a6060

2012-06-14 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit f2a606050d592153f0f0ad36da2df9afcbdade13 Author: Sylvestre Ledru Date: Thu Jun 14 18:48:41 2012 +0200 html doc No longer provided diff --git a/debian/libhdf5-doc.install b/debian/libhdf5-doc.install index 6d2490d..30ac4f6

[SCM] hdf5 branch, master, updated. upstream/1.8.7-132-gf45f819

2012-06-14 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit f45f819c948f1252150e589b353cd97ae88fab87 Author: Sylvestre Ledru Date: Thu Jun 14 17:43:27 2012 +0200 Update of the patches for 1.8.9 diff --git a/debian/changelog b/debian/changelog index d5a5226..03924d6 100644 --- a

[SCM] hdf5 branch, master, updated. upstream/1.8.7-132-gf45f819

2012-06-14 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit fc73790e1b0694d47ab4371aabbf406decb0824a Merge: f9b561ebdba8378591668de58a8cb5a321e2a8c6 fbf1a7e61f0bfaa28066028efdce0c229b5da8b7 Author: Sylvestre Ledru Date: Thu Jun 14 17:27:40 2012 +0200 Merge tag 'upstream/

Bug#673788: hdf5: New upstream release (1.8.9)

2012-05-21 Thread Sylvestre Ledru
Source: hdf5 Severity: wishlist A new upstream release has been published. Looks like it is only minor changes: http://www.hdfgroup.org/newsletters/newsletter127.html -- System Information: Debian Release: wheezy/sid APT prefers testing APT policy: (600, 'testing'), (500, 'unstable'), (500,

Bug#660547: Please re-enable C++ libraries

2012-04-20 Thread Sylvestre Ledru
On 20/04/2012 10:02, Tolga Dalman wrote: Package: libhdf5-serial-dev Version: 1.8.8-9 Followup-For: Bug #660547 To remove a package feature, just because it's not used by any other Debian package appears rather strange to me. The main reason was that it was a pain to manage symbol files with a

[SCM] hdf5 branch, master, updated. upstream/1.8.7-127-g546daa5

2012-03-08 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 546daa56f5463c256c0ad9080a065279d61aed89 Author: Sylvestre Ledru Date: Thu Mar 8 16:02:32 2012 +0100 Force the dependency on the serpack for hdf5-tools & hdf5-helpers. Thanks to Julien Cristau for the second fix.

[SCM] hdf5 branch, master, updated. upstream/1.8.7-126-g3ddd6c9

2012-03-06 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 3ddd6c9a5bfff42b8e1deb4b6e3d286f564aa1d7 Author: Sylvestre Ledru Date: Tue Mar 6 15:54:26 2012 +0100 * Change the dependency of hdf5-tools from libhdf5-7 (= ${binary:Version}) => ${shlibs:Depends}. It should relax

[SCM] hdf5 tag, 1.8.8-8, created. upstream/1.8.7-126-g3ddd6c9

2012-03-06 Thread Sylvestre Ledru
The tag, 1.8.8-8 has been created at 3ddd6c9a5bfff42b8e1deb4b6e3d286f564aa1d7 (commit) - Shortlog commit 3ddd6c9a5bfff42b8e1deb4b6e3d286f564aa1d7 Author: Sylvestre Ledru Date: Tue Mar 6 15:54:26 2012 +0100 * Change the

Bug#660547: Please re-enable C++ libraries

2012-02-21 Thread Sylvestre Ledru
Le mardi 21 février 2012 à 15:01 +0100, Julien Cristau a écrit : > On Sun, Feb 19, 2012 at 21:31:22 -0600, Steve M. Robbins wrote: > > > On Sun, Feb 19, 2012 at 09:37:49PM +0100, Julien Cristau wrote: > > > On Sun, Feb 19, 2012 at 13:40:03 -0600, Steve M. Robbins wrote: > > > > > > > Package: hdf

Re: Bug#657949: Cannot install libhdf5-mpi-dev and libnetcdf-dev

2012-02-13 Thread Sylvestre Ledru
Le samedi 11 février 2012 à 00:09 +0100, Francesco P. Lovergine a écrit : > On Wed, Feb 01, 2012 at 09:57:39AM +0100, Sylvestre Ledru wrote: > > Le mardi 31 janvier 2012 à 21:56 -0600, Steve M. Robbins a écrit : > > > On Tue, Jan 31, 2012 at 04:41:06PM +0100, Sylvestre Ledru w

Bug#658491: closed by "Francesco P. Lovergine" (Re: Bug#658491: hdf5-tools programs cannot find libhdf5.so.7)

2012-02-04 Thread Sylvestre Ledru
Le samedi 04 février 2012 à 11:49 +0100, Francesco P. Lovergine a écrit : > On Sat, Feb 04, 2012 at 11:25:29AM +0100, Giuseppe Bilotta wrote: > > Thanks for the reply. However, I do believe this is still a bug in the > > dependency specification, since if the hdf5-tools > > package depends on the

Bug#657949: Cannot install libhdf5-mpi-dev and libnetcdf-dev

2012-02-01 Thread Sylvestre Ledru
Le mardi 31 janvier 2012 à 21:56 -0600, Steve M. Robbins a écrit : > On Tue, Jan 31, 2012 at 04:41:06PM +0100, Sylvestre Ledru wrote: > > reassign 657949 hdf5 > > forcemerge 591346 657949 > > thanks > > > > Le lundi 30 janvier 2012 à 00:02 -0600, Steve M. Robbins

Bug#644994: Still exist but workaround exists

2012-01-31 Thread Sylvestre Ledru
Bug still occurs in version 1.8.8 However, the option -w 65535 fixes the issue. $ h5dump -w 65535 plain.hdf5 > /dev/null && echo $? 0 ___ Pkg-grass-devel mailing list Pkg-grass-devel@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-b

Bug#657949: Cannot install libhdf5-mpi-dev and libnetcdf-dev

2012-01-31 Thread Sylvestre Ledru
reassign 657949 hdf5 forcemerge 591346 657949 thanks Le lundi 30 janvier 2012 à 00:02 -0600, Steve M. Robbins a écrit : > Package: libhdf5-mpi-dev > Version: 1.8.8-5 > Severity: important > > I can install libhdf5-mpi-dev > I can install libnetcdf-dev > but I cannot install both together: Even

[SCM] hdf5 branch, master, updated. upstream/1.8.8-36-g6739d60

2012-01-31 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 6739d6082d1dd21c2e240d4709448a7ab116504f Author: Sylvestre Ledru Date: Tue Jan 31 15:24:49 2012 +0100 Support of alpha & sh4. Thanks to Michael Cree & Nobuhiro Iwamatsu. (Closes: #656516) diff --git a/debian/cha

[SCM] hdf5 branch, master, updated. upstream/1.8.8-36-g6739d60

2012-01-31 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit c33855af292e54ae4d824f51239c5ce9b4ea8edb Author: Sylvestre Ledru Date: Tue Jan 31 15:10:45 2012 +0100 sh4 support diff --git a/debian/changelog b/debian/changelog index 6bab2cf..7e2b556 100644 --- a/debian/changelog +++ b

[SCM] hdf5 tag, 1.8.8-5, created. upstream/1.8.8-34-g91b73e7

2012-01-31 Thread Sylvestre Ledru
The tag, 1.8.8-5 has been created at 91b73e79ec8e051d0b221eac9b2378fba18518a7 (commit) - Shortlog commit 91b73e79ec8e051d0b221eac9b2378fba18518a7 Author: Sylvestre Ledru Date: Tue Jan 31 14:45:36 2012 +0100 * Force the

[SCM] hdf5 branch, master, updated. upstream/1.8.8-34-g91b73e7

2012-01-31 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 91b73e79ec8e051d0b221eac9b2378fba18518a7 Author: Sylvestre Ledru Date: Tue Jan 31 14:45:36 2012 +0100 * Force the path to OpenMPI. This might fix the FTBFS on sparc. * Force to quit when the configure is failing. Thanks

[SCM] hdf5 branch, master, updated. upstream/1.8.8-34-g91b73e7

2012-01-31 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 918fc8a81cba6a501eacbc42328eb80e28dd1d55 Author: Sylvestre Ledru Date: Mon Jan 23 15:08:39 2012 +0100 Display the config.log file if the configure fails diff --git a/debian/rules b/debian/rules index c604a76..8abe010 100755

[SCM] hdf5 branch, master, updated. upstream/1.8.8-34-g91b73e7

2012-01-31 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 3b6656e58cf9bc44e2b4597f85eceebaf7b9ee7f Author: Sylvestre Ledru Date: Mon Jan 23 15:08:53 2012 +0100 Update of the symbol with the ia64 stuff diff --git a/debian/libhdf5-7.symbols b/debian/libhdf5-7.symbols index 31071bc

[SCM] hdf5 branch, master, updated. upstream/1.8.8-34-g91b73e7

2012-01-31 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 448a32c6717d50e3244e88d7357f78e345ce29fe Author: Sylvestre Ledru Date: Mon Jan 23 16:29:05 2012 +0100 * Update the symbol list under ia64 * In case of failure of the configure, display the config.log file. Enabled

[SCM] hdf5 annotated tag, upstream/1.8.6, created. upstream/1.8.6

2012-01-23 Thread Sylvestre Ledru
The annotated tag, upstream/1.8.6 has been created at d48e7153b9411804346547e8d03c6b6e4d745718 (tag) tagging 67007fee240c07de384d7bec42cba6e9334bb08b (commit) replaces upstream/1.8.4-patch1 tagged by Sylvestre Ledru on Fri Feb 25 10:48:37 2011 +0100 - Shortlog

[SCM] hdf5 tag, 1.8.8-4, created. upstream/1.8.8-33-g448a32c

2012-01-23 Thread Sylvestre Ledru
The tag, 1.8.8-4 has been created at 448a32c6717d50e3244e88d7357f78e345ce29fe (commit) - Shortlog commit 448a32c6717d50e3244e88d7357f78e345ce29fe Author: Sylvestre Ledru Date: Mon Jan 23 16:29:05 2012 +0100 * Update the

[SCM] hdf5 annotated tag, upstream/1.8.7, updated. upstream/1.8.7

2012-01-23 Thread Sylvestre Ledru
Ledru on Mon May 16 13:15:35 2011 +0200 - Shortlog Upstream version 1.8.7 Sylvestre Ledru (1): Imported Upstream version 1.8.7 --- -- Hierarchical Data

Bug#656516: hdf5 still FTBFS on alpha because of symbols mismatches

2012-01-23 Thread Sylvestre Ledru
Le lundi 23 janvier 2012 à 19:58 +1300, Michael Cree a écrit : > Sylvestre, > > >> Could you update symbol file? > > I've already done it with alpha. I will do it in a future upload with > > sh4. > > hdf5 (version 1.8.8-3) still FTBFS on Alpha due to symbol mismatches > despite the attempt to fix

[SCM] hdf5 tag, 1.8.8-3, created. upstream/1.8.8-30-g3389f8a

2012-01-23 Thread Sylvestre Ledru
The tag, 1.8.8-3 has been created at 3389f8a05f5cef8375038c2e2aa6d016850fa262 (commit) - Shortlog commit 3389f8a05f5cef8375038c2e2aa6d016850fa262 Author: Sylvestre Ledru Date: Mon Jan 23 11:43:51 2012 +0100 Upload into

[SCM] hdf5 branch, master, updated. upstream/1.8.8-30-g3389f8a

2012-01-23 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 3389f8a05f5cef8375038c2e2aa6d016850fa262 Author: Sylvestre Ledru Date: Mon Jan 23 11:43:51 2012 +0100 Upload into unstable diff --git a/debian/changelog b/debian/changelog index 03a770d..2b6a124 100644 --- a/debian

Bug#656516: hdf5 FTBFS on alpha and sh4: symbol file needs updating

2012-01-20 Thread Sylvestre Ledru
Le vendredi 20 janvier 2012 à 05:33 +0900, Nobuhiro Iwamatsu a écrit : > Source: hdf5 > > sh4: > dpkg-gensymbols: warning: some symbols or patterns disappeared in the > symbols file: see diff output below > dpkg-gensymbols: warning: debian/libhdf5-mpich2-7/DEBIAN/symbols > doesn't match completely

HDF5 transition from version 1.8.6 => 1.8.8

2012-01-20 Thread Sylvestre Ledru
anguage Henning Glawe libpdl-io-hdf5-perl Josselin Mouette tessa Juan A. Añel gnudatalanguage (U) Mathieu Malaterre vtk (U) Salvatore Bonaccorso udav (U) Soeren Sonnenburg h5py shogun Sylvestre Ledru jhdf (U) libcgns (U) scilab (U) Sébastien Villemot

[no subject]

2012-01-20 Thread Sylvestre Ledru
anguage Henning Glawe libpdl-io-hdf5-perl Josselin Mouette tessa Juan A. Añel gnudatalanguage (U) Mathieu Malaterre vtk (U) Salvatore Bonaccorso udav (U) Soeren Sonnenburg h5py shogun Sylvestre Ledru jhdf (U) libcgns (U) scilab (U) Sébastien Villemot

[SCM] hdf5 branch, master, updated. upstream/1.8.8-29-g244a6c0

2012-01-19 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 244a6c017236a57a0c245b0b29bc10d0249eae29 Author: Sylvestre Ledru Date: Thu Jan 19 18:32:54 2012 +0100 Fix various dependencies issues diff --git a/debian/changelog b/debian/changelog index 6f0779e..03a770d 100644 --- a

[SCM] hdf5 branch, master, updated. upstream/1.8.8-29-g244a6c0

2012-01-19 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 138206c6745feda3b1446dfa855a50685975d3f7 Author: Sylvestre Ledru Date: Thu Jan 19 15:11:58 2012 +0100 Outdated doc diff --git a/debian/README.Debian_shlib b/debian/README.Debian_shlib deleted file mode 100644 index ddadc88

[SCM] hdf5 branch, master, updated. upstream/1.8.8-27-gc8c5084

2012-01-19 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit ab78729a670b8bc2fa91c5f8161412cc1ed3984c Author: Sylvestre Ledru Date: Thu Jan 19 14:03:20 2012 +0100 Fix a problem causing hdf5-tools to be uninstallable with hdf5 openmpi/mpich2 diff --git a/debian/changelog b/debian

[SCM] hdf5 branch, master, updated. upstream/1.8.8-27-gc8c5084

2012-01-19 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit c8c508481b5b387a21dbda63909dc22a184187c4 Merge: ab78729a670b8bc2fa91c5f8161412cc1ed3984c 641b8efee6ea727399b94bd1fe901b9cf363e000 Author: Sylvestre Ledru Date: Thu Jan 19 14:16:42 2012 +0100 Merge branch 'master'

[SCM] hdf5 branch, master, updated. upstream/1.8.8-25-g641b8ef

2012-01-19 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 641b8efee6ea727399b94bd1fe901b9cf363e000 Author: Sylvestre Ledru Date: Thu Jan 19 10:59:46 2012 +0100 Not supposed to be in the debian/ rep diff --git a/debian/plop b/debian/plop deleted file mode 100644 index c0b4f55

[SCM] hdf5 branch, master, updated. upstream/1.8.8-24-ge9fe5b2

2012-01-19 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit e9fe5b2bfcf806e4b729db5e5cc6fb019786ebe0 Author: Sylvestre Ledru Date: Thu Jan 19 10:58:43 2012 +0100 hdf5-helpers collided with hdf5-tools at upgrade time (Closes: #656427) diff --git a/debian/changelog b/debian/changelog

[SCM] hdf5 branch, master, updated. upstream/1.8.8-23-g1c4a3ce

2012-01-19 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 75a1cbbd8b8d6e82e84004ffbed4e00a636b4227 Author: Sylvestre Ledru Date: Thu Jan 19 10:29:00 2012 +0100 Update the symbol list for sparc diff --git a/debian/libhdf5-7.symbols b/debian/libhdf5-7.symbols index 3144d94..31071bc

[SCM] hdf5 branch, master, updated. upstream/1.8.8-23-g1c4a3ce

2012-01-19 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 1c4a3ce16d32698d8f457957a5253158bdcf93bd Author: Sylvestre Ledru Date: Thu Jan 19 10:51:58 2012 +0100 Improve of the hdf5-tools dep diff --git a/debian/changelog b/debian/changelog index ab8da0b..c34f654 100644 --- a/debian

[SCM] hdf5 branch, master, updated. upstream/1.8.8-23-g1c4a3ce

2012-01-19 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 992f759d0b5233821f4776368864c1fe6fbcaf8a Author: Sylvestre Ledru Date: Thu Jan 19 10:51:03 2012 +0100 Fix a probleme in the not parallel declaration diff --git a/debian/rules b/debian/rules index 8849899..476d7e6 100755

[SCM] hdf5 branch, master, updated. upstream/1.8.8-23-g1c4a3ce

2012-01-19 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit e388096ccb35e9c1337f82675e99903a156dcc9e Author: Sylvestre Ledru Date: Thu Jan 19 10:51:35 2012 +0100 bad dependency on the mpich2 dev package diff --git a/debian/control b/debian/control index ab40263..1709786 100644 --- a

[SCM] hdf5 branch, master, updated. upstream/1.8.8-23-g1c4a3ce

2012-01-19 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 00e0e54e93ce4b62e84eb568d7c1b818d5355c5e Author: Sylvestre Ledru Date: Thu Jan 19 10:49:40 2012 +0100 Update of the arch list diff --git a/debian/control b/debian/control index d8a2e75..ab40263 100644 --- a/debian/control

[SCM] hdf5 branch, master, updated. upstream/1.8.8-23-g1c4a3ce

2012-01-19 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 6bd11de37640a11aad8886e30227e8676a3efdb4 Author: Sylvestre Ledru Date: Thu Jan 19 09:29:10 2012 +0100 * Some wierd artefacts in the define were breaking ia64 build * Force g++ as the C++ compiler * In some cases

[SCM] hdf5 branch, master, updated. upstream/1.8.8-17-g7b5d06c

2012-01-18 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 7b5d06c6c2960a155976b53e4a2abed47a4e9e11 Author: Sylvestre Ledru Date: Wed Jan 18 17:51:25 2012 +0100 libhdf5-openmpi-7-dbg was build for arch:any while it should be built only on openmpi supported archs diff --git a

[SCM] hdf5 branch, master, updated. upstream/1.8.8-16-ga88fc8e

2012-01-18 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit a88fc8e0479472f9b113d30eaad5f6af0f22d1bc Author: Sylvestre Ledru Date: Wed Jan 18 16:27:46 2012 +0100 Replace the original package diff --git a/debian/control b/debian/control index 32bbe27..0672526 100644 --- a/debian

[SCM] hdf5 branch, master, updated. upstream/1.8.8-16-ga88fc8e

2012-01-18 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 65670a8dff8cbff26f781d4df9adcdd520e42984 Author: Sylvestre Ledru Date: Wed Jan 18 15:11:55 2012 +0100 Fix an upstream wrong assumption that ia64 => ifort as Fortran compiler. Should fix ia64 (and maybe sparc) FTBFS. d

[SCM] hdf5 branch, master, updated. upstream/1.8.8-14-gf6c8e83

2012-01-18 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit f6c8e8388dfece3f4c2029893121a107c4fb76ea Author: Sylvestre Ledru Date: Wed Jan 18 12:16:16 2012 +0100 Fix symbol list for alpha (Closes: #656299) diff --git a/debian/changelog b/debian/changelog index dc4615e..7730b5f

[SCM] hdf5 branch, master, updated. upstream/1.8.8-13-g66f16a5

2012-01-18 Thread Sylvestre Ledru
The following commit has been merged in the master branch: commit 66f16a56115ab14356162eebe7a268c9c7a5d1f0 Author: Sylvestre Ledru Date: Wed Jan 18 11:54:37 2012 +0100 Add a transitionnal package libhdf5-serial-dev => libhdf5-dev * Add a transitionnal package libhdf5-serial-

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