[PyMOL] slab mode fine-tuning
Dear pymol users, I am looking for a way to zoom in a molecule, like the slab mode when you are rolling the scroll wheel. The reason why rolling the scroll wheel does not work in my case is that the resulting change is too coarse grained, i.e. either I cannot see all the atoms I want to or there are some atoms in front of the part I am interested in. I tried as well clip slab, x, but then not just atoms in front of the interesting part are not shown but as well behind it. So, what I need is a cross-sectional view of my system, in which only everything in front of the cut is not shown (but everything behind). Thank's a lot for any help, Nadine Dr. Nadine Utz MMB - IRB Barcelona -- Enable your software for Intel(R) Active Management Technology to meet the growing manageability and security demands of your customers. Businesses are taking advantage of Intel(R) vPro (TM) technology - will your software be a part of the solution? Download the Intel(R) Manageability Checker today! http://p.sf.net/sfu/intel-dev2devmar ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
[PyMOL] Pymol 1.4 OpenGL issue with openSuSE 11.3 / 11.4
Dear pymol users, pymol 1.4 on openSuSE with NVIDIA Quadro FX 3700/3800 and new NVIDIA drivers (260.xxx and 270.xxx) does not recognize the OpenGL Version correctly. As a result there is a kind of software OpenGL used. The NVIDIA drivers provide OpenGL 3.3.0 but pymol 1.4 complains: Detected OpenGL version prior to 2.0. Shaders unavailable. OpenGL graphics engine: GL_VENDOR: Brian Paul GL_RENDERER: Mesa X11 GL_VERSION: 1.5 Mesa 6.4.2 This leads to a malfunctioning hardware stereo and renders pymol 1.4 unusable for us. Earlier pymol versions do not show that strange behavior. Other programs use the NVIDIA drivers perfectly well and allow displaying structures in hardware stereo. I tried this thing on several machines with the same result. Does anyone have a hint? Regards, -- Dr. rer. nat. Joachim Greipel Med. Hochschule Hannover Biophys. Chem. OE 4350 Carl-Neuberg-Str. 1 30625 Hannover Germany Fon: +49-511-532-3718 Fax: +49-511-532-8924 smime.p7s Description: S/MIME cryptographic signature -- Enable your software for Intel(R) Active Management Technology to meet the growing manageability and security demands of your customers. Businesses are taking advantage of Intel(R) vPro (TM) technology - will your software be a part of the solution? Download the Intel(R) Manageability Checker today! http://p.sf.net/sfu/intel-dev2devmar___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Re: [PyMOL] Pymol 1.4 OpenGL issue with openSuSE 11.3 / 11.4
Joachim, I'm running into the same issue on a SuSe SLED10 box. The 32bit binary (on the 64bit OS) displays the same behavior, i.e. only the MESA libs were used. The 64bit version actually core dumps during startup. I opened up a bug report with Schrodinger and they were already working on it (I suppose the crash), but wouldn't hurt to reinforce the fact that the 32bit version only uses the MESA libs (under SuSe?). Good that your tried the more recent drivers, I was planning to do that but haven't got around to do this yet. Cheers, Carsten -Original Message- From: greipel.joac...@mh-hannover.de [mailto:Greipel.Joachim@mh- hannover.de] Sent: Tuesday, March 29, 2011 7:16 AM To: pymol-users@lists.sourceforge.net Subject: [PyMOL] Pymol 1.4 OpenGL issue with openSuSE 11.3 / 11.4 Dear pymol users, pymol 1.4 on openSuSE with NVIDIA Quadro FX 3700/3800 and new NVIDIA drivers (260.xxx and 270.xxx) does not recognize the OpenGL Version correctly. As a result there is a kind of software OpenGL used. The NVIDIA drivers provide OpenGL 3.3.0 but pymol 1.4 complains: Detected OpenGL version prior to 2.0. Shaders unavailable. OpenGL graphics engine: GL_VENDOR: Brian Paul GL_RENDERER: Mesa X11 GL_VERSION: 1.5 Mesa 6.4.2 This leads to a malfunctioning hardware stereo and renders pymol 1.4 unusable for us. Earlier pymol versions do not show that strange behavior. Other programs use the NVIDIA drivers perfectly well and allow displaying structures in hardware stereo. I tried this thing on several machines with the same result. Does anyone have a hint? Regards, -- Dr. rer. nat. Joachim Greipel Med. Hochschule Hannover Biophys. Chem. OE 4350 Carl-Neuberg-Str. 1 30625 Hannover Germany Fon: +49-511-532-3718 Fax: +49-511-532-8924 -- Enable your software for Intel(R) Active Management Technology to meet the growing manageability and security demands of your customers. Businesses are taking advantage of Intel(R) vPro (TM) technology - will your software be a part of the solution? Download the Intel(R) Manageability Checker today! http://p.sf.net/sfu/intel-dev2devmar ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Re: [PyMOL] slab mode fine-tuning
Nadine, Probably the command line is your best friend here. Look into the 'clip near,x' and 'clip far,x' command, which allows to move the front and back clipping planes in x increments. Positive values move towards you, negative values of x away from you. If that does not provide enough fine grained control you may want to think about making a composite picture to 'fake' clipping planes per object. Cheers, Carsten -Original Message- From: Nadine Utz [mailto:nad...@mmb.pcb.ub.es] Sent: Tuesday, March 29, 2011 6:12 AM To: pymol-users@lists.sourceforge.net Subject: [PyMOL] slab mode fine-tuning Dear pymol users, I am looking for a way to zoom in a molecule, like the slab mode when you are rolling the scroll wheel. The reason why rolling the scroll wheel does not work in my case is that the resulting change is too coarse grained, i.e. either I cannot see all the atoms I want to or there are some atoms in front of the part I am interested in. I tried as well clip slab, x, but then not just atoms in front of the interesting part are not shown but as well behind it. So, what I need is a cross-sectional view of my system, in which only everything in front of the cut is not shown (but everything behind). Thank's a lot for any help, Nadine Dr. Nadine Utz MMB - IRB Barcelona --- --- Enable your software for Intel(R) Active Management Technology to meet the growing manageability and security demands of your customers. Businesses are taking advantage of Intel(R) vPro (TM) technology - will your software be a part of the solution? Download the Intel(R) Manageability Checker today! http://p.sf.net/sfu/intel-dev2devmar ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Enable your software for Intel(R) Active Management Technology to meet the growing manageability and security demands of your customers. Businesses are taking advantage of Intel(R) vPro (TM) technology - will your software be a part of the solution? Download the Intel(R) Manageability Checker today! http://p.sf.net/sfu/intel-dev2devmar ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Re: [PyMOL] Pymol 1.4 OpenGL issue with openSuSE 11.3 / 11.4
This appears to be a common problem with 1.4 and Jason is aware of it. The same issue exists in Ubuntu 9.04 with Nvidia 180.xx drivers, 32 bit. The Win version works OK. Roger Rowlett On Mar 29, 2011 7:53 AM, Schubert, Carsten [PRDUS] cschu...@its.jnj.com wrote: Joachim, I'm running into the same issue on a SuSe SLED10 box. The 32bit binary (on the 64bit OS) displays the same behavior, i.e. only the MESA libs were used. The 64bit version actually core dumps during startup. I opened up a bug report with Schrodinger and they were already working on it (I suppose the crash), but wouldn't hurt to reinforce the fact that the 32bit version only uses the MESA libs (under SuSe?). Good that your tried the more recent drivers, I was planning to do that but haven't got around to do this yet. Cheers, Carsten -Original Message- From: greipel.joac...@mh-hannover.de [mailto:Greipel.Joachim@mh- hannover.de] Sent: Tuesday, March 29, 2011 7:16 AM To: pymol-users@lists.sourceforge.net Subject: [PyMOL] Pymol 1.4 OpenGL issue with openSuSE 11.3 / 11.4 Dear pymol users, pymol 1.4 on openSuSE with NVIDIA Quadro FX 3700/3800 and new NVIDIA drivers (260.xxx and 270.xxx) does not recognize the OpenGL Version correctly. As a result there is a kind of software OpenGL used. The NVIDIA drivers provide OpenGL 3.3.0 but pymol 1.4 complains: Detected OpenGL version prior to 2.0. Shaders unavailable. OpenGL graphics engine: GL_VENDOR: Brian Paul GL_RENDERER: Mesa X11 GL_VERSION: 1.5 Mesa 6.4.2 This leads to a malfunctioning hardware stereo and renders pymol 1.4 unusable for us. Earlier pymol versions do not show that strange behavior. Other programs use the NVIDIA drivers perfectly well and allow displaying structures in hardware stereo. I tried this thing on several machines with the same result. Does anyone have a hint? Regards, -- Dr. rer. nat. Joachim Greipel Med. Hochschule Hannover Biophys. Chem. OE 4350 Carl-Neuberg-Str. 1 30625 Hannover Germany Fon: +49-511-532-3718 Fax: +49-511-532-8924 -- Enable your software for Intel(R) Active Management Technology to meet the growing manageability and security demands of your customers. Businesses are taking advantage of Intel(R) vPro (TM) technology - will your software be a part of the solution? Download the Intel(R) Manageability Checker today! http://p.sf.net/sfu/intel-dev2devmar ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Enable your software for Intel(R) Active Management Technology to meet the growing manageability and security demands of your customers. Businesses are taking advantage of Intel(R) vPro (TM) technology - will your software be a part of the solution? Download the Intel(R) Manageability Checker today! http://p.sf.net/sfu/intel-dev2devmar___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Re: [PyMOL] slab mode fine-tuning
Hi, On Tue, 29 Mar 2011 6:12 AM Nadine Utz [mailto:nad...@mmb.pcb.ub.es] wrote: Dear pymol users, I am looking for a way to zoom in a molecule, like the slab mode when you are rolling the scroll wheel. The reason why rolling the scroll wheel does not work in my case is that the resulting change is too coarse grained, i.e. either I cannot see all the atoms I want to or there are some atoms in front of the part I am interested in. I tried as well clip slab, x, but then not just atoms in front of the interesting part are not shown but as well behind it. So, what I need is a cross-sectional view of my system, in which only everything in front of the cut is not shown (but everything behind). Thank's a lot for any help, On Tue, 29 Mar 2011 07:56:09 -0400 Schubert, Carsten [PRDUS] cschu...@its.jnj.com wrote: Nadine, Probably the command line is your best friend here. Look into the 'clip near,x' and 'clip far,x' command, which allows to move the front and back clipping planes in x increments. Positive values move towards you, negative values of x away from you. If that does not provide enough fine grained control you may want to think about making a composite picture to 'fake' clipping planes per object. You can also control the front and rear clipping planes independently by holding down the Shift key along with the right mouse button (assuming you are in the standard 3-button viewing mode). Moving the mouse vertically changes the front clipping plane and moving it horizontally changes the rear clipping plane. Cheers, Rob -- Robert L. Campbell, Ph.D. Senior Research Associate/Adjunct Assistant Professor Botterell Hall Rm 644 Department of Biochemistry, Queen's University, Kingston, ON K7L 3N6 Canada Tel: 613-533-6821Fax: 613-533-2497 robert.campb...@queensu.cahttp://pldserver1.biochem.queensu.ca/~rlc -- Enable your software for Intel(R) Active Management Technology to meet the growing manageability and security demands of your customers. Businesses are taking advantage of Intel(R) vPro (TM) technology - will your software be a part of the solution? Download the Intel(R) Manageability Checker today! http://p.sf.net/sfu/intel-dev2devmar ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
[PyMOL] Calling pymol from python - access to global variables
Hi, I'm having some trouble accessing a function defined at top level with alter_state in a python script launching pymol. Maybe I shouldn't be wanting to do this, but what I'm trying, and failing to do is exemplified by this script: ### #!/usr/bin/env python import pymol if __name__ == __main__: pymol.finish_launching() def identity(x,y,z): print YEAH! return x,y,z # Fix: # setattr(pymol,identity,identity) pymol.editor.build_peptide(G) pymol.cmd.alter_state(1,all,(x,y,z)=identity(x,y,z)) ### The problem is that the function 'identity' (which may be given a more sensical form by actually doing something with the coordinates), is sought in the pymol namespace. I can't really figure out where I should be looking to directly call the function. Of course, I can register the function in the pymol module (uncomment the setattr line), but I don't think it's proper meddling with established modules like that. Does anyone know a better/cleaner solution? In addition, does anyone know how to suppress the GUI stuff when launching pymol like this? Groetjes, Tsjerk -- Tsjerk A. Wassenaar, Ph.D. post-doctoral researcher Molecular Dynamics Group * Groningen Institute for Biomolecular Research and Biotechnology * Zernike Institute for Advanced Materials University of Groningen The Netherlands -- Enable your software for Intel(R) Active Management Technology to meet the growing manageability and security demands of your customers. Businesses are taking advantage of Intel(R) vPro (TM) technology - will your software be a part of the solution? Download the Intel(R) Manageability Checker today! http://p.sf.net/sfu/intel-dev2devmar ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Re: [PyMOL] Calling pymol from python - access to global variables
Hi Tsjerk, use either the global pymol.stored variable or the alter_state 'space' argument. -- #!/usr/bin/env python if __name__ == __main__: import __main__ __main__.pymol_argv = [ 'pymol', '-cq' ] import pymol pymol.finish_launching() else: import pymol def identity(x,y,z): print YEAH! return x,y,z pymol.editor.build_peptide(G) pymol.cmd.alter_state(1,all,(x,y,z)=identity(x,y,z), space={'identity':identity}) # or: # pymol.stored.identity = identity # pymol.cmd.alter_state(1,all,(x,y,z)=stored.identity(x,y,z)) -- Cheers, Thomas On Tue, Mar 29, 2011 at 6:18 PM, Tsjerk Wassenaar tsje...@gmail.com wrote: Hi, I'm having some trouble accessing a function defined at top level with alter_state in a python script launching pymol. Maybe I shouldn't be wanting to do this, but what I'm trying, and failing to do is exemplified by this script: ### #!/usr/bin/env python import pymol if __name__ == __main__: pymol.finish_launching() def identity(x,y,z): print YEAH! return x,y,z # Fix: # setattr(pymol,identity,identity) pymol.editor.build_peptide(G) pymol.cmd.alter_state(1,all,(x,y,z)=identity(x,y,z)) ### The problem is that the function 'identity' (which may be given a more sensical form by actually doing something with the coordinates), is sought in the pymol namespace. I can't really figure out where I should be looking to directly call the function. Of course, I can register the function in the pymol module (uncomment the setattr line), but I don't think it's proper meddling with established modules like that. Does anyone know a better/cleaner solution? In addition, does anyone know how to suppress the GUI stuff when launching pymol like this? Groetjes, Tsjerk -- Tsjerk A. Wassenaar, Ph.D. post-doctoral researcher Molecular Dynamics Group * Groningen Institute for Biomolecular Research and Biotechnology * Zernike Institute for Advanced Materials University of Groningen The Netherlands -- Thomas Holder MPI for Developmental Biology Spemannstr. 35 D-72076 Tübingen -- Enable your software for Intel(R) Active Management Technology to meet the growing manageability and security demands of your customers. Businesses are taking advantage of Intel(R) vPro (TM) technology - will your software be a part of the solution? Download the Intel(R) Manageability Checker today! http://p.sf.net/sfu/intel-dev2devmar ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
[PyMOL] Newline character in labels
Hi, I'd like to label a couple of CA atoms in with their AA code, residue number and b-factor. Since this gets a long label, I want to split it to get two lines. For example, if I have the CA atom of Asn124 with a b-factor of 36.2, I want it to be labelled as follows: Asn124 36.2 However, I cannot get the line break into the label! Is there any possibility? I tried things like \n or unicode encoding u\u000a in combination with a unicode font (label_font_id 15). But I couldn't manage to get the label on two lines. Thanks for any hints! Andreas PS: Please excuse if this message is posted twice, but it seems to me that my first attempt didn't come through to you. (This is my first posting on this list.) -- Enable your software for Intel(R) Active Management Technology to meet the growing manageability and security demands of your customers. Businesses are taking advantage of Intel(R) vPro (TM) technology - will your software be a part of the solution? Download the Intel(R) Manageability Checker today! http://p.sf.net/sfu/intel-dev2devmar ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Re: [PyMOL] Pymol 1.4 OpenGL issue with openSuSE 11.3 / 11.4
Hi Joachim, Sorry for the delay. I'm spending the entire day on the floor of the ACS meeting, showing off PyMOL. pymol 1.4 on openSuSE with NVIDIA Quadro FX 3700/3800 and new NVIDIA drivers (260.xxx and 270.xxx) does not recognize the OpenGL Version correctly. As a result there is a kind of software OpenGL used. The NVIDIA drivers provide OpenGL 3.3.0 but pymol 1.4 complains: We're aware of this problem and we're looking into a solution. This bug is odd because I develop on Open SuSE 11.3 and haven't had any problems. We have a SLED 10.2 machine and some other Linux machines we'll test this on. At this point it looks like a simple initialization error with GLEW, but we're still looking into it. Thanks for bringing this to our attention. I expect this to be resolved quickly. Cheers, -- Jason -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) jason.vertr...@schrodinger.com (o) +1 (603) 374-7120 -- Enable your software for Intel(R) Active Management Technology to meet the growing manageability and security demands of your customers. Businesses are taking advantage of Intel(R) vPro (TM) technology - will your software be a part of the solution? Download the Intel(R) Manageability Checker today! http://p.sf.net/sfu/intel-dev2devmar ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Re: [PyMOL] Newline character in labels
Hi Andreas, This is currently not possible. If this is a feature you'd like to see implemented, please go here http://pymol.org/contact and leave us a message. It'll be tracked internally so we don't drop the ball if we decide to implement it. Cheers, -- Jason On Tue, Mar 29, 2011 at 12:03 PM, Andreas Spitzmüller andreas.spitzmuel...@staff.uni-marburg.de wrote: Hi, I'd like to label a couple of CA atoms in with their AA code, residue number and b-factor. Since this gets a long label, I want to split it to get two lines. For example, if I have the CA atom of Asn124 with a b-factor of 36.2, I want it to be labelled as follows: Asn124 36.2 However, I cannot get the line break into the label! Is there any possibility? I tried things like \n or unicode encoding u\u000a in combination with a unicode font (label_font_id 15). But I couldn't manage to get the label on two lines. Thanks for any hints! Andreas PS: Please excuse if this message is posted twice, but it seems to me that my first attempt didn't come through to you. (This is my first posting on this list.) -- Enable your software for Intel(R) Active Management Technology to meet the growing manageability and security demands of your customers. Businesses are taking advantage of Intel(R) vPro (TM) technology - will your software be a part of the solution? Download the Intel(R) Manageability Checker today! http://p.sf.net/sfu/intel-dev2devmar ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) jason.vertr...@schrodinger.com (o) +1 (603) 374-7120 -- Enable your software for Intel(R) Active Management Technology to meet the growing manageability and security demands of your customers. Businesses are taking advantage of Intel(R) vPro (TM) technology - will your software be a part of the solution? Download the Intel(R) Manageability Checker today! http://p.sf.net/sfu/intel-dev2devmar ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
Re: [PyMOL] Newline character in labels
Hi Andreas, In the meantime, you can set double labels by using a pseudoatom, labeling it with the second part, and placing the label at the spot desired. Cheers, Tsjerk On Wed, Mar 30, 2011 at 3:59 AM, Jason Vertrees jason.vertr...@schrodinger.com wrote: Hi Andreas, This is currently not possible. If this is a feature you'd like to see implemented, please go here http://pymol.org/contact and leave us a message. It'll be tracked internally so we don't drop the ball if we decide to implement it. Cheers, -- Jason On Tue, Mar 29, 2011 at 12:03 PM, Andreas Spitzmüller andreas.spitzmuel...@staff.uni-marburg.de wrote: Hi, I'd like to label a couple of CA atoms in with their AA code, residue number and b-factor. Since this gets a long label, I want to split it to get two lines. For example, if I have the CA atom of Asn124 with a b-factor of 36.2, I want it to be labelled as follows: Asn124 36.2 However, I cannot get the line break into the label! Is there any possibility? I tried things like \n or unicode encoding u\u000a in combination with a unicode font (label_font_id 15). But I couldn't manage to get the label on two lines. Thanks for any hints! Andreas PS: Please excuse if this message is posted twice, but it seems to me that my first attempt didn't come through to you. (This is my first posting on this list.) -- Enable your software for Intel(R) Active Management Technology to meet the growing manageability and security demands of your customers. Businesses are taking advantage of Intel(R) vPro (TM) technology - will your software be a part of the solution? Download the Intel(R) Manageability Checker today! http://p.sf.net/sfu/intel-dev2devmar ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) jason.vertr...@schrodinger.com (o) +1 (603) 374-7120 -- Enable your software for Intel(R) Active Management Technology to meet the growing manageability and security demands of your customers. Businesses are taking advantage of Intel(R) vPro (TM) technology - will your software be a part of the solution? Download the Intel(R) Manageability Checker today! http://p.sf.net/sfu/intel-dev2devmar ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Tsjerk A. Wassenaar, Ph.D. post-doctoral researcher Molecular Dynamics Group * Groningen Institute for Biomolecular Research and Biotechnology * Zernike Institute for Advanced Materials University of Groningen The Netherlands -- Enable your software for Intel(R) Active Management Technology to meet the growing manageability and security demands of your customers. Businesses are taking advantage of Intel(R) vPro (TM) technology - will your software be a part of the solution? Download the Intel(R) Manageability Checker today! http://p.sf.net/sfu/intel-dev2devmar ___ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net