RE: [PyMOL] Re: PyMOL-users digest, Vol 1 #749 - 8 msgs

2004-11-20 Thread Warren DeLano
Kostas, Some (all?) Logitech mice come misconfigured with the middle mouse button assigned to some goofy proprietary function. You can fix this on Windows, but I don't know about Mac. Personally, I no longer buy Logitech products for this exact reason. Microsoft Intellimice work fine with

RE: [PyMOL] RE: wire mesh spheres?

2004-11-20 Thread Warren DeLano
Actually, the setting is set transparency_mode = 1 It's a long story, but if you start using transparency a lot, you'll find that there are times when you prefer not to see multiple layers of transparent objects, such as convoluted surfaces, for the sake of clarity. PyMOL defaults to that

RE: [PyMOL] cmd.read_pdbstr segfault

2004-11-20 Thread Thomas Stout
Ah - completely different situationI found an installation of v0.97 (WinXP) and 1DT7 also loads fine there - so I guess it's not inherent to version 0.97 - at least not the windows version -Tom -Original Message- From: Charles Moad [mailto:cm...@indiana.edu] Sent: Sat

RE: [PyMOL] cmd.read_pdbstr segfault

2004-11-20 Thread Warren DeLano
Tom Charles, Tom, thanks for your attention to this issue -- actually, the problem is more narrow... Charles was (only) seeing a segfault with the read_pdbstr function and PDB file 1DT7, and indeed I have been able to reproduce this on Linux with version 0.97. However, the latest 0.98 betas

RE: [PyMOL] cmd.read_pdbstr segfault

2004-11-20 Thread Warren DeLano
Charles, Open-Source PyMOL source code is always available for anonymous CVS checkout from SourceForge: http://sourceforge.net/cvs/?group_id=4546 However, that tends to be 24-hours out of date -- and, well, a lot happened yesterday (grin)...so I just posted a couple of new builds along with a