humanity through all the
people around the world who use R to help them better understand and
manage their own social, political, and physical environments.
Sarah
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751 Emerson Ct.
San Jos
-1/k²,1/k²].
Would a normal RV be better? Some other bell-shaped RV?
Does adding a bit (but not too much) of randomness to the
input values have reason at all?
-JimC
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751 Emerson Ct.
San
don't have the time to
investigate this myself, however. ("sos" is on R-Forge.R-Project.org
with the RSiteSearch project there.) Please contact me offline if you
are interested. Thanks, Spencer Graves
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h
sample size in experitment group
+ # pietrue response rate for experiment group
+ # alphasize of the test
+ #-
+
+ za<-qnorm(1-alpha)
+ re<-ne*pie
+ xe<-asin(sqrt((re+0.375)/(ne+0.75)))
+ xc<-asin(sqrt((rc+0.375)/(nc+0.75)))
+ ans<-za*sqrt
that contain interaction effects. The 'cld' method
in the 'multcomp' package seems only to work for main effects. Does
such a thing exist already? Thank you for any thoughts,
Josh
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(ie if the same set of parameters
produce different objective value depending on the run). In this case
the fit stops prematurely and the method SANN should be preferred.
In conclusion, give us more information but take into account that
non-linear optimization is a complex world !
Marc
--
Sp
(tst, seq(0, 1, .1))
Hope this helps.
Spencer Graves
On 9/27/2011 5:25 AM, Tigisti G wrote:
> Hi
>
> Can any one inform me an r package used to fit Cubic M-splines or r functions
> used to have design and penalty matrices in fitting cubic M-splines please?
>
>
> Than
rchive at Nabble.com.
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President and Chie
ename was
*.wma created by the Windows 7 Sound Recorder.
MICHAEL: Thanks.
Spencer
On 9/21/2011 4:25 PM, Michael Sumner wrote:
On Thu, Sep 22, 2011 at 8:08 AM, Spencer Graves
wrote:
A more general question: What tools are available in R for reading parts of
binary files? 'sc
to those of us (including me) who love R, when
it comes to audio processing w/ freeware,
Audacity FTW.
'nuff said
Carl
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p
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PLEASE do read th
for suggestions.
(I'd rather ask a stupid question than make a stupid mistake.)
Hope this helps.
Spencer Graves
On 9/8/2011 11:19 AM, Mitchell Maltenfort wrote:
Also, look at ocw.mit.edu for free course notes with statistical content.
On 9/8/11, kensuguro wrote:
I under
Hi, Jesper:
Where "Outside R" do you want to use it?
There are R interfaces to many other software packages, and many
that cannot easily link to R can link to Fortran. You could use
library(sos) to search for R packages to connect to whatever.
Hope this helps.
Spe
inced ESS/R users. If so
i'd really appreciate tips on efficient package
installation/maintenance using Emacs/ESS.
TIA,
karl
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Structur
guide.html
and provide commented, minimal, self-contained, reproducible code.
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On 7/8/2011 8:07 AM, Federico Calboli wrote:
On 8 Jul 2011, at 15:56, Spencer Graves wrote:
Ok, thanks for that. I though that, since R in under GPL-v2, I
can only release my code under GPL-v2 because the code is written
in R and probably qualifies as a derivative work.
Did you include someone
(0)20 75941602 Fax +44 (0)20 75943193
f.calboli [.a.t] imperial.ac.uk
f.calboli [.a.t] gmail.com
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and pr
Hello:
On 7/4/2011 7:41 AM, Barry Rowlingson wrote:
On Mon, Jul 4, 2011 at 8:47 AM, Vaishali Sadaphal
wrote:
Hi All,
I need to give my R code to my client to use. I would like to protect the
logic/algorithms that have been coded in R. This means that I would not
like anyone to be able to re
find different answers for how
to provide for ourselves and our families without a university salary.
Hope this helps.
Spencer Graves
Thanks
--
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=-=-=
Notice: The information contained in this e-mail
message and/or attachments to it may contain
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[[alternative HTML versio
;
-> "Mailing Lists". In particular, you might be most interested in
R-sig-ecology.
Hope this helps.
Spencer Graves
> I am desperately looking for help from you guys.
>
> Thanks in advance.
>
> Eddie
>
> [[alternative HTML version deleted]]
7;)
if(language=='duh')return(c('duh', 'hud')) else tm:::stopwords(language)
> stopwords('duh')
[1] "duh" "hud"
This may not be all you need to do to use "tm" with Slovene, but
it might help you with "stopwords".
1142,NEW ZEALAND
Phone: +64 9 923 5055, or +64 9 373 7599 ext 85055
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wer Saver. Now your PC
will use less power so it won't heat up so much although your
performance could suffer a bit.
Also ensure that there is sufficient air circulation around the machine.
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elp
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
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ailman/listinfo/r-help
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ailman/listinfo/r-help
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me operators in R by myself. Is this possible?
Regards!
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Department of Statistcis
Iowa State University
Ames, IA, US 50011
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PLEASE do read the posting g
ut it still took a moderate level of effort.
Hope this helps.
Spencer Graves
On 3/19/2011 6:51 PM, David Winsemius wrote:
On Mar 19, 2011, at 8:32 PM, Sally Luo wrote:
Hi R users,
I need to draw a map of select European countries with country names
shown
on the map. Does a
plications like that in parallel without paying more for Windows
Server than I paid for the hardware. So far, I'm working fine with 2 GB
RAM under Linux with fewer problems than I have with 8 GB RAM under Vista.
Hope this helps.
Spencer Graves
On 3/18/2011 4:39 PM, Liviu Andr
1. There is a CRAN mirror at Bristol (roughly 100km from
Swansea?). They must have (or have had) some very active R users there.
2. Sundar Dorai-Raj and I developed a local R Archive Network
and subversion repository internal to a company where we used to work.
I believe t
s
installPackages(rls.)
# install missing packages with many matches
# so we can get more information about those packages
writeFindFn2xls(rls.)
# Produce an Excel file with a package summary
# as well a table of the individual matches
Hope this helps.
Spencer Graves
p.s. The fun
us of surveys, because too rarely
today are surveys used for legitimate scientific purposes. Most often,
they are used to defraud the public into doing things that are contrary
to their best interests.
Spencer Graves
On 3/4/2011 11:37 AM, Ista Zahn wrote:
Now hold on a second Harsh!
If I read the help file correctly, another alternative is as
follows:
sink(file="my_R_log.txt", split=TRUE)
"split = logical: if TRUE, output will be sent to the new sink
and to the current output stream"
Hope this helps,
Spencer
On 2/21/2011 11:45 AM
You may also be interested in the "psych" package or possibly
"mvtBinaryEP". I found these using "sos":
library(sos)
tc <- findFn('tetrachoric correlation') # 26 matches
tcs <- findFn('tetrachoric correlations')#27 matches
tc. <- tc|tcs
summary(tc.) # 35 links in 5 pkgs
tc.
All
I echo Prof. Ripley's and Jari Oksanen's concerns. I see two
options in case the R-Forge package maintainer does not submit the
package to CRAN:
(1) Copy the function(s) you want from that package into
your own. In such cases, I recommend you change the name of the
functi
On 2/17/2011 3:49 PM, William Dunlap wrote:
-Original Message-
From: r-help-boun...@r-project.org
[mailto:r-help-boun...@r-project.org] On Behalf Of Petr Savicky
Sent: Wednesday, February 16, 2011 10:46 PM
To: r-help@r-project.org
Subject: Re: [R] logsumexp function in R
On Wed, Feb 16,
ollers) .OO#. .OO#. rocks...1k
---
Sent from my phone. Please excuse my brevity.
Spencer Graves wrote:
That's a procedure for those who want to write Fortran in R, who love debugging spaghetti and refuse to be bothered with silly things like test suites and
any firm notion of funct
That's a procedure for those who want to write Fortran in R, who love
debugging spaghetti and refuse to be bothered with silly things like
test suites and any firm notion of functionality. Spencer
On 2/11/2011 7:06 PM, David Scott wrote:
On 12/02/2011 1:27 p.m., Yihui Xie wrote:
I guess Ema
Dear Dr. Wolf:
I understand your concern that the mechanics of writing an R
package can be difficult. It was hard for me when I started.
I came to embrace it, because I actually got more done in less
time doing so. In my previous experience, as code I wrote got more
complicat
Have you considered:
(lg.170.4 <- lgamma(-170.4))
(lg.171.4 <- lgamma(-171.4))
The problem is documented with ".Machine$double.xmin"
Hope this helps,
Spencer
On 2/9/2011 7:23 AM, Chuse chuse wrote:
Dear R users,
I have to calculate gamma functions for negative numbers b
t read, copy, forward, or
store this message unless you are an intended recipient of it. If you have
received this message in error, please forward it to the sender and delete it
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d 25 items
m
[,1] [,2] [,3] [,4] [,5]
[1,] 1.0 0.0 0.5 -0.3 0.2
[2,] 0.0 1.0 0.1 0.0 0.0
[3,] 0.5 0.1 1.0 0.3 0.7
[4,] -0.3 0.0 0.3 1.0 0.4
[5,] 0.2 0.0 0.7 0.4 1.0
all( eigen(m)$values>0 )
#[1] TRUE
Then i thought of using logical expression to determine if there
a
I think the bottom line can be summarized as follows:
1. Give up on Cholesky factors unless you have a matrix
you know must be symmetric and strictly positive definite. (I seem to
recall having had problems with chol even with matrices that were
theoretically positive or n
The following worked for me recently:
library(RMySQL)
MySQL. <- MySQL()
MySQLcon <- dbConnect(MySQL., user='thisuser', password='thispassword',
dbname='desiredDB')
I have the following suggestions and questions for you:
1. Have you tried supplyi
de.html and provide
commented, minimal, self-contained, reproducible code", as it says in
the signature block for each email on this list.
Hope this helps.
Spencer Graves
On 1/14/2011 6:42 AM, Federico Bonofiglio wrote:
Hello everybody
Quick question, if you'd like
riatric Medicine and Gerontology School of Medicine Johns
Hopkins University
Ph. (410) 502-2619
email: rvarad...@jhmi.edu
-Original Message-
From: r-help-boun...@r-project.org [mailto:r-help-boun...@r-project.org] On
Behalf Of Spencer Graves
Sent: Friday, January 07, 2011 8:26 AM
To: Mike Ma
replicated -- effects that get smaller upon replication. (My wife and I
>>> routinely avoid certain therapies recommended by physicians, because the
>>> physicians get much of their information on recent drugs from the
>>> pharmaceuticals, who h
Part of the phenomenon can be explained by the natural censorship
in what is accepted for publication: Stronger results tend to have less
difficulty getting published. Therefore, given that a result is
published, it is evident that the estimated magnitude of the effect is
in average lar
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--
Spen
6 49 31.2 30.2 35 ...
$ n : int 1 2 2 1 1 1 1 1 2 2 ...
patts <- paste("^", rownames(makeup(form)), "$", sep="")
makuform<- makeup(form)
makuform$amass <- sapply(patts, function(x) {return( thermo$element[
grep(x, thermo$element[[1]])[1], "mass"
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751 Emers
think that should have been
help.start()
Joel
-Original Message-
From: r-help-boun...@r-project.org
[mailto:r-help-boun...@r-project.org] On Behalf Of Spencer Graves
Sent: Saturday, December 18, 2010 1:35 PM
To: Duncan Murdoch
Cc: r-help@r-project.org; eric
Subject: Re: [R] pdf package
Hi, Duncan:
I'm confused:
help_start()
Error: could not find function "help_start"
Thanks,
Spencer
sessionInfo()
R version 2.12.0 (2010-10-15)
Platform: i386-pc-mingw32/i386 (32-bit)
locale:
[1] LC_COLLATE=English_United States.1252
[2] LC_CTYPE=English_United States.1252
The best way to get a pdf version of any CRAN package is to your
favorite CRAN mirror, click "Packages", then find the package of
interest. "Reference manual" is a pdf version of the package
documentation. This also includes other information such as Vignettes,
which can be extremely va
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-help@r-project.org mailing list
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
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President
nimal, self-contained, reproducible code.
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the big list.
>
> However
>> data(package='Ecdat')
> displays the datasets list of Ecdat
>
> B.R.
> Stephen L
>
>
>
>
>
>
>
> From: Spencer Graves
> To: Stephen Liu; r-help
> Sent: Mon, November 29, 2010 11:33:1
; with your reply.
Hope this helps.
Spencer
On 11/28/2010 6:38 PM, Stephen Liu wrote:
Hi Spencer,
Win 7
I can't find the folders RTools\perl
perl is on C:\Users\satimis\My Document\R\win-library\2.12\gdata\perl
Nor I can find the folder "Strawberry perl". Can you he
Thanks: I didn't read the prop.table help page with sufficient care.
On 11/28/2010 1:48 PM, casperyc wrote:
I am using
prop.table(m,1)
and
prop.table(m,2)
my aim.
which I think is the most 'easy' way.
Thanks.
Casper
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President and Chief Op
prop.table divides every element by the matrix total, not its colSums:
> m <- matrix(1:4, 2)
> m
[,1] [,2]
[1,]13
[2,]24
> prop.table(m)
[,1] [,2]
[1,] 0.1 0.3
[2,] 0.2 0.4
m/rowSums(m) divides every row by its rowSum:
> m/rowSums(m)
[,1] [,2]
o support 'XLSX' (Excel 2007+) files.
gdata: Run the function 'installXLSXsupport()'
gdata: to automatically download and install the perl
gdata: libaries needed to support Excel XLS and XLSX formats.
Read ?installXLSXsupport
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ditto. Spencer Graves
On 11/25/2010 1:20 PM, Dennis Murphy wrote:
Since today is American Thanksgiving, I want to thank:
(a) R-core for all of their efforts to produce what is, IMHO,
the best statistical software around, not simply for the
convenience of doing more, better
Hello:
That package needs to be compiled from source on the computer you
are using. Instructions for doing so can be found at
"http://biostat.mc.vanderbilt.edu/wiki/Main/RMySQL";.
I'm not sure of all the issues, but I believe it needs to be
configured to the specific version o
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Preside
self-contained, reproducible code.
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Hi, Mike, et al.:
On 11/22/2010 5:43 PM, Mike Marchywka wrote:
Date: Mon, 22 Nov 2010 17:28:57 -0800
From: spencer.gra...@structuremonitoring.com
To: g...@well.ox.ac.uk
CC: r-h...@stat.math.ethz.ch
Subject: Re: [R] Find in R and R books
Other p
Other people like R Site Search
(http://search.r-project.org/nmz.html), which is available via the
standard R function "RSiteSearch".
For me, the fastest literature search on virtually anything
statistical is the "findFn" function in the "sos" package.
(Disclaimer: I'm the lead
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sity of Houston - Downtown
mailto: erinm.hodg...@gmail.com
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To learn why sspir does not have a filter function, you need to
ask the package maintainer, Claus Dethlefsen . My belief is
that he, Soren Lundbye-Christensen and Anette Luther Christensen found
other outlets for their time since they completed the package and the
companion paper, "C. D
Hello:
I hope that someone more knowledgeable will confirm or correct
what I'm about to say. I don't have time now to check this by studying
the "pspline" code.
From reading the pspline{survival} help page, I believe it uses
standard B-splines, "penalising the integrated secon
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reatly appreciated.
Jim...
On Sun, Oct 31, 2010 at 1:44 PM, David Winsemiuswrote:
On Oct 31, 2010, at 12:54 PM, Spencer Graves wrote:
Have you tried the 'sos' package?
I have, and I am taking this opportunity to load it with my .Rprofile to
make it more accessible. It works very well.
semius, MD
West Hartford, CT
1) http://finzi.psych.upenn.edu/Rhelp10/2008-March/155990.html
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install.packages('sos')# if you don't have it already
library(sos)
rs <- ???roots
# 216 matches
summary(rs)
# in 106 packages
rs # opens a web browser with all 216 matched in a table
# listing the package with the most matches first.
# This included roots{signal}, which referenced polyroot{base},
# Frank Bretz, Torsten Hothorn and Peter Westfall (2010), Multiple
Comparisons Using R, CRC Press, Boca Raton.
Hope this helps.
Spencer Graves
On 10/21/2010 7:50 PM, Timothy Spier wrote:
I am a new R user but a long time SAS user. I searched for a response to this question
but no luc
nce matrix. (If it's not reasonable to assume multivariate
normal, then I don't know if it's reasonable to estimate a correlation
matrix.) I have not tried it, but I believe that "missMDA" should solve
this problem assuming all the "uniquenesses" are equal.
2010 <- read.table('2010101000.txt')
dbWriteTable(con, "b20101010", x2010, overwrite = T)
If this does not work, please note that there is a mailing list
specifically for questions regarding database issues with R (R-SIG-DB:
"https://stat.ethz.ch/mailman/listinfo
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de.html
and provide commented, minimal, self-contained, reproducible code.
--
Spencer Graves, PE, PhD
President and Chief Operating Officer
Structure Inspection and Monitoring, Inc.
751 Emerson Ct.
San José, CA 95126
ph: 408-655-4567
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R-help@r-proje
ortunately, I failed to receive the news when it was removed from
CRAN, because the package had an obsolete email address for me. The
package will be back on CRAN by the end of this month. In the meantime,
I trust you can install.packages from the attached zip file.
Hope this help
ackage.
Thanks in advance
Christophe
* page 12 of reference manual of gsl.
http://cran.r-project.org/web/packages/gsl/gsl.pdf
--
Spencer Graves, PE, PhD
President and Chief Operating Officer
Structure Inspection and Monitoring, Inc.
751 Emerson Ct
Thanks. Spencer
On 10/2/2010 10:51 AM, Dirk Eddelbuettel wrote:
On Sat, Oct 02, 2010 at 10:38:22AM -0700, Spencer Graves wrote:
Is there anything on CRAN that is NOT free?
Lots.
Also notice that 'free' means more than redistribution.
I assumed that CRAN had a pol
[!duplicated(x[,1]),]
table(x[,"License"])
Best,
Uwe Ligges
Thanks,
Paul
[[alternative HTML version deleted]]
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PLEASE do read the posting guide
http://www.R-project.org/
uestion:
Is there a ready-made function in R or any R packages to find the prime
factorization of an integer?
Yes. At least two. The obvious search strategy with your favrite
search tool should work well.
--
Spencer Graves, PE, PhD
President and Chief Operating Offi
sting guide http://www.R-project.org/posting-guide.html
> and provide commented, minimal, self-contained, reproducible code.
--
Spencer Graves, PE, PhD
President and Chief Operating Officer
Structure Inspection and Monitoring, Inc.
751 Emerson Ct.
San José, CA 95126
ph:
can
feed with the model to "predict.fRegress" to get plotting levels. The
output of "predict" can then be fed to "contour" to produce what you
want, I think. I'm sorry I don't have time now to fill in the details.
Hope this helps.
Spence
ge the entries
directly. Otherwise, I'd be pleased to hear your comments, suggested
improvements, etc., via email.
Thanks,
Spencer Graves
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PLEASE do r
tion of "findFn" objects, writing an Excel
file that includes an extended summary by package in one sheet with the
search results in another, documented in a vignette.
Hope this helps.
Spencer Graves
lead author of "sos"
On 9/7/2010 12:56 AM, Barry Rowlingson wr
being the list of matches
similar to that produced in the browser.
Hope this helps.
Spencer Graves
(lead author of "sos")
On 9/5/2010 8:07 AM, David Winsemius wrote:
On Sep 5, 2010, at 10:53 AM, Donald Braman wrote:
Does anyone know of a package (or workaround)
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