Re: [spctools-discuss] Tandem2XML all-15N issue

2022-06-07 Thread Farshad AbdollahNia
Hi David, Thank you for updating the code and sorry for my late reply. This solves the problem for all 15N-labeling (I'll test with the new release). I hope in the future versions we can just read the "residue mass parameters" group from the input file to allow for more flexible user-defined label

[spctools-discuss] stuck with problem making tpp

2022-06-07 Thread Malcolm Cook
Hi, I am following & adapting TPP 6.1.0: Installing on Ubuntu 20.04 LTS for our centos 7 environment. Here are some notes and problems I've encountered so far. I am building as non privileged us

RE: [spctools-discuss] Re: TPP 6.1.0 Release is now available

2022-06-07 Thread Eric Deutsch
Hi Malcolm, thank you for the corrections, the page is now updated. Let me know if you find any other problems. http://tools.proteomecenter.org/wiki/index.php?title=TPP_6.1.0:_Installing_on_Ubuntu_20.04_LTS Thanks! Eric *From:* spctools-discuss@googlegroups.com *On Behalf Of *Malcolm C

Re: [spctools-discuss] Re: TPP 6.1.0 Release is now available

2022-06-07 Thread Malcolm Cook
Hi David, Indeed, the svn link I took from these instructions is incorrect (and probably should be amended), while the link you advise (and appearing above in the announcement) is correct. BTW - I

Re: [spctools-discuss] Re: TPP 6.1.0 Release is now available

2022-06-07 Thread 'David Shteynberg' via spctools-discuss
Hi Malcolm, Thanks for your interest in the TPP. I think your url has a mistake in it. Please try the following command: svn checkout http://svn.code.sf.net/p/sashimi/code/tags/release_6-1-0 Cheers, -David On Tue, Jun 7, 2022 at 3:44 P

Re: [spctools-discuss] Re: TPP 6.1.0 Release is now available

2022-06-07 Thread Malcolm Cook
Hi, I am checking out again from the release_6.1.0 since my `make all` is problematic, I want to start over, and `make clean` seems perhaps incomplete in its cleaning. Alas I encounter this error whose workaround I can not guess: svn checkout http://svn.code.sf.net/p/sashimi/code/tags/release_