I'm testing it as root, which is temporary a member of a user group (acl)
configured for the project prj_cfd_of_ext :
qconf -sprj prj_cfd_of_ext | grep acl
acl cfd_ext
xacl NONE
qconf -su cfd_ext | grep root
,czcmmma,ezcsmuy,fzcmh3q,d486sa0,hjkljqf,xzcjk9r,root
The hostgroup is
Am 04.12.2012 um 16:49 schrieb baf035:
Projects should be probably ignored for AR , I do not see any relation or
dependency here. Or I'm wrong?
In my opinion: no, they should be honored but in a proper way. Otherwise an
user could submit an AR to certain queues/machines where he has no
Hello,
I cannot find in any documentation, please could somebody explain me how
is the relationship between AR definition and project configuration in a
queue?
I'm able to configure AR:
~# qrsub -pe Pe_C02_Ba 8 -q all.q@nodec02n122 -N reservation -d
1:0:0
Your advance reservation
Lane Schwartz dowob...@gmail.com writes:
I'm trying to figure out a way to define and launch jobs programmatically.
The idea is that I am writing a computationally intensive program in
some programming language (most typically Java or Scala, but sometimes
C, C++, Ruby). I would like to be
Nevermind, problem with the license.
2012/12/10 jan roels janro...@gmail.com
Hi,
I added some new nodes and when i run my script i get the following:
/var/spool/gridengine/execd/node1/job_scripts/160: line 2: $'\r': command
not found
/var/spool/gridengine/execd/node1/job_scripts/160:
Projects should be probably ignored for AR , I do not see any relation or
dependency here. Or I'm wrong?
2012/12/4 Reuti re...@staff.uni-marburg.de
Am 04.12.2012 um 08:50 schrieb baf035:
I'm testing it as root, which is temporary a member of a user group
(acl) configured for the project
Hi all.
We've got some memory allocation/memory contention issues our users are
complaining about. Many are saying they can't get their jobs to run because of
memory resource issues.
An example:
scheduling info:
(-l h_vmem=24G,virtual_free=24G) cannot run at host
hi
is there any grid engine command to find out the actual memory utilization
of job submitted?
Regards
PVK
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baf035 baf...@gmail.com writes:
I'm testing it as root, which is temporary a member of a user group (acl)
configured for the project prj_cfd_of_ext :
qconf -sprj prj_cfd_of_ext | grep acl
acl cfd_ext
xacl NONE
qconf -su cfd_ext | grep root
baf035 baf...@gmail.com writes:
In case of setting of project in the queue for a hostgroup is impossible
use Advance Reservation:
~# qconf -sq all.q | grep projects
projects NONE,[@c02_Ba=prj_cfd_of_ext]
xprojects NONE
~# qrsub -pe Pe_C02_Ba 8 -q
Hello again,
I got a chance to run some more tests. I can recreate the problem with
different ports on the switch, and I can recreate it between different pairs of
nodes. I also used tcpdump to look for bad checksums (while recreating the
commlib error) and got nothing. Is it still possible
Am 04.12.2012 um 08:50 schrieb baf035:
I'm testing it as root, which is temporary a member of a user group (acl)
configured for the project prj_cfd_of_ext :
qconf -sprj prj_cfd_of_ext | grep acl
acl cfd_ext
xacl NONE
qconf -su cfd_ext | grep root
Am 04.12.2012 um 13:59 schrieb Reuti:
Am 04.12.2012 um 08:50 schrieb baf035:
I'm testing it as root, which is temporary a member of a user group (acl)
configured for the project prj_cfd_of_ext :
qconf -sprj prj_cfd_of_ext | grep acl
acl cfd_ext
xacl NONE
qconf -su cfd_ext | grep
Ben De Luca bdel...@gmail.com writes:
Careful not to set the number of tickets too high, there is a bug I believe
that can cause the code to wrap the number of tickets to be negative.
Do you know/remember how that shows up? If it's reproducible, we could
make an issue of it.
The underling
While performing routine weekly checks on our test cluster (it runs
Rocks 6.0 with CentOS 6.2), I noticed that all currently every job's
priority as '-nan' (running and waiting).
Uncertain of what caused this issue, I submitted a test job
'hello_world_serial.sh'. It seems to start out by
Hi,
I added some new nodes and when i run my script i get the following:
/var/spool/gridengine/execd/node1/job_scripts/160: line 2: $'\r': command
not found
/var/spool/gridengine/execd/node1/job_scripts/160: line 9: $'\r': command
not found
I'm sure the script is correct, it always worked on my
On Fri, Dec 07, 2012 at 09:38:26AM +0530, Vamsi Krishna wrote:
hi
is there any grid engine command to find out the actual memory utilization
of job submitted?
qacct -j jobid
Note that in some versions of SGE there was a bug that would cause the
value to wrap at 4GB (and thus be wrong for
On Mon, Dec 10, 2012 at 7:07 AM, Gowtham sgowt...@mtu.edu wrote:
While performing routine weekly checks on our test cluster (it runs
Rocks 6.0 with CentOS 6.2), I noticed that all currently every job's
priority as '-nan' (running and waiting).
Uncertain of what caused this issue, I submitted
On Mon, Dec 10, 2012 at 9:27 AM, Forster, Robert
robert.fors...@agr.gc.ca wrote:
Hello all:
I'm running a small Rocks cluster (Rocks 5.4, 7 nodes, 56 cores). I
need to run many iterations of a program that takes 13 hrs to finish on
53 cores. I can successfully run the program via the command
Am 10.12.2012 um 11:35 schrieb jan roels:
Nevermind, problem with the license.
Hehe - it should be handled in a better way by the software instead of
resulting in some kind of syntax error. - Reuti
2012/12/10 jan roels janro...@gmail.com
Hi,
I added some new nodes and when i run my
Hi Jan,
Have you made any modifications to the script recently? It looks like
something is inserting Windows carriage returns which show up as \n\r in
UNIX/Linux, which subsequently newlines the \n, leaving a \r on the
following empty line.
Ian
On Mon, Dec 10, 2012 at 4:01 AM, jan roels
Hi Jake,
You can do 'qhost -F h_vmem,mem_free,virtual_free', that might be a
useful view for you.
In general, I've only ever used one of the three complexes above.
Which one(s) do you have defined for the execution hosts? e.g.
qconf -se compute-1-7
h_vmem will map to 'ulimit -v'
mem_free
Am 10.12.2012 um 15:13 schrieb Semi:
host group @allhosts is required attribute of SGE?
No.
It can be deleted?
Yes.
-- Reuti
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I second Alex's thoughts. In all our clusters, we only use h_vmem
(to indicate the hard cap per job) and mem_free (a suggestion to
the scheduler as to which node the job should be started on).
Best regards,
g
--
Gowtham
Information Technology Services
Michigan Technological University
(906)
Am 11.12.2012 um 21:32 schrieb Gowtham:
I second Alex's thoughts. In all our clusters, we only use h_vmem
The difference is that virtual_free is only a guidance for SGE, but h_vmem will
also be enforced. It depends on the working style of the users/groups which you
want to prefer to use. Is
Am 07.12.2012 um 11:31 schrieb Jake Carroll:
Hi all.
We've got some memory allocation/memory contention issues our users are
complaining about. Many are saying they can't get their jobs to run because
of memory resource issues.
An example:
scheduling info:
Am 10.12.2012 um 16:07 schrieb Gowtham:
While performing routine weekly checks on our test cluster (it runs
Rocks 6.0 with CentOS 6.2), I noticed that all currently every job's
priority as '-nan' (running and waiting).
Uncertain of what caused this issue, I submitted a test job
Am 10.12.2012 um 19:37 schrieb Luca Clementi:
On Mon, Dec 10, 2012 at 9:27 AM, Forster, Robert
robert.fors...@agr.gc.ca wrote:
Hello all:
I'm running a small Rocks cluster (Rocks 5.4, 7 nodes, 56 cores). I
need to run many iterations of a program that takes 13 hrs to finish on
53 cores.
Greetings.
How do I request the CPU type in qrsh / qsub with SGE 8.1.2?
Googling this question shows some answers of the type qrsh -l arch=xxx.
However, all my nodes in my qhost shows the same type of arch:
# qhost -F | grep arch
hl:arch=lx-amd64
hl:arch=lx-amd64
hl:arch=lx-amd64
Hi,
Am 07.12.2012 um 11:16 schrieb Arnau Bria:
I've configured our cluster in the way that slots
slots are consumable by default in `qconf -sc`.
/memory are consumable
resources. Our nodes have their limits and there are some default
resources requirements at job submission. All this conf
Am 11.12.2012 um 22:14 schrieb Joseph Farran:
Greetings.
How do I request the CPU type in qrsh / qsub with SGE 8.1.2?
Googling this question shows some answers of the type qrsh -l arch=xxx.
However, all my nodes in my qhost shows the same type of arch:
# qhost -F | grep arch
Am 11.12.2012 um 22:19 schrieb Reuti:
Hi,
Am 07.12.2012 um 11:16 schrieb Arnau Bria:
I've configured our cluster in the way that slots
slots are consumable by default in `qconf -sc`.
/memory are consumable
resources. Our nodes have their limits and there are some default
Cool.
Thanks for the response guys. See in line:
On 12/12/12 6:45 AM, Reuti re...@staff.uni-marburg.de wrote:
Am 11.12.2012 um 21:32 schrieb Gowtham:
I second Alex's thoughts. In all our clusters, we only use h_vmem
The difference is that virtual_free is only a guidance for SGE, but
h_vmem
Thanks Jesse, yes it always wrap around 4G, seems bug.
On Wed, Dec 12, 2012 at 1:08 AM, Jesse Becker becker...@mail.nih.govwrote:
On Fri, Dec 07, 2012 at 09:38:26AM +0530, Vamsi Krishna wrote:
hi
is there any grid engine command to find out the actual memory utilization
of job submitted?
On 12/12/2012 02:17 AM, Jake Carroll wrote:
Cool.
Thanks for the response guys. See in line:
On 12/12/12 6:45 AM, Reuti re...@staff.uni-marburg.de wrote:
Am 11.12.2012 um 21:32 schrieb Gowtham:
I second Alex's thoughts. In all our clusters, we only use h_vmem
The difference is that
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