Re: [OMPI users] Linking failure on Windows

[Shiqing Fan]

Hi Gib,

Actually, I also think defining OMPI_IMPORTS would solve the problem. 
And I also double checked the released binaries and the source code, 
those symbols are surely exported. So I'm now really confused.


Gib, do you know how to generate preprocessor files in VS 2005? It 
should be one option under the C/C++ settings of the project. If you can 
provide me the preprocessor file of nvector_parallel.c, it would be 
helpful to find out the problem.



Regards,
Shiqing


On 2012-10-02 8:25 AM, Gib Bogle wrote:

They don't make any difference.  I had them in, but dropped them when I found 
that the mpicc build didn't need them.

Gib

From: users-boun...@open-mpi.org [users-boun...@open-mpi.org] on behalf of 
Damien Hocking [dam...@khubla.com]
Sent: Tuesday, 2 October 2012 7:21 p.m.
To: Open MPI Users
Subject: Re: [OMPI users] Linking failure on Windows

There's two imports missing from there, OPAL_IMPORTS and ORTE_IMPORTS.
That might be part of it.

Damien

On 01/10/2012 10:20 PM, Gib Bogle wrote:

I guess it's conceivable that one of these Sundials include files is
doing something:

#include  /* prototypes for CVODE
fcts. */
#include   /* definition of N_Vector and
macros /
#include   /* definition of realtype /
#include/* definition of EXP */

I am a complete beginner with Sundials, so I have no idea how it might
interfere with the preprocessor definitions.

Here is the compile command line from VS:

/O2 /Ob2 /I "E:\sundials-2.5.0\include" /I "E:\Sundials-Win32\include"
/I "c:\Program Files (x86)\OpenMPI_v1.6.2-win32\include" /D "WIN32" /D
"_WINDOWS" /D "NDEBUG" /D "OMPI_IMPORTS" /D "_CRT_SECURE_NO_WARNINGS"
/D "CMAKE_INTDIR=\"Release\"" /D "_MBCS" /FD /MD
/Fo"cvAdvDiff_non_p.dir\Release\\"
/Fd"E:\Sundials-Win32\examples\cvode\parallel\Release/cvAdvDiff_non_p.pdb"
/W3 /c /TC /errorReport:prompt

Gib


On 2/10/2012 5:06 p.m., Damien Hocking wrote:

So mpicc builds it completely?  The only thing I can think of is look
closely at both the compile and link command lines and see what's
different.  It might be going sideways at the compile from something
in an include with a preprocessor def.

Damien

___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users

___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users

___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] error compiling openmpi-1.6.1 on Windows 7

[Shiqing Fan]

05 1:02 PM, Siegmar Gross wrote:

Hi Shiqing,


D:\...\prog\mpi\small_prog>mpiexec init_finalize.exe
-
Sorry!  You were supposed to get help about:
   invalid if_inexclude
But I couldn't open the help file:
   D:\...\prog\mpi\small_prog\..\share\openmpi\help-mpi-btl-tcp.txt:
   No such file or directory.  Sorry!
-

...

Why does "mpiexec" look for the help file relativ to my current
program and not relative to itself? The file is part of the
package.

Do you know how I can solve this problem?

I have similar issue with message from tcp, but it's not finding the
file, it's something else, which doesn't affect the execution of the
application. Could you make sure the help-mpi-btl-tcp.txt is actually in
the path D:\...\prog\mpi\small_prog\..\share\openmpi\?

That wouldn't be a good idea because I have MPI programs in different
directories so that I would have to install all help files in several
places (/../share/openmpi/help*.txt). All help files are
available in the installation directory of Open MPI.

dir "c:\Program Files (x86)\openmpi-1.6.1\bin\mpiexec.exe"
...
29.08.2012  10:5938.912 mpiexec.exe
...
dir "c:\Program Files 
(x86)\openmpi-1.6.1\bin\..\share\openmpi\help-mpi-btl-tcp.txt"
...
03.04.2012  16:30   631 help-mpi-btl-tcp.txt
...

I don't know if "mpiexec" or my program "init_finilize" is responsible
for the error message but whoever is responsible shouldn't use the path
to my program but the prefix_dir from MPI to find the help files. Perhaps
you can change the behaviour in the Open MPI source code.



I can also compile in 64-bit mode but the program hangs.

Do you have any ideas why the program hangs? Thank you very much for any
help in advance.

To be honest I don't know. I couldn't reproduce it. Did you try
installing the binary installer, will it also behave the same?

I like to have different versions of Open MPI which I activate via
a batch file so that I can still run my program in an old version if
something goes wrong in a new one. I have no entries in the system
environment or registry so that I can even run different versions in
different command windows without problems (everything is only known
within the command window in which a have run my batch file). It seems
that you put something in the registry when I use your installer.
Perhaps you remember an earlier email where I had to uninstall an old
version because the environment in my own installation was wrong
as long as your installation was active. Nevertheless I can give it
a try. Perhaps I find out if you set more than just the path to your
binaries. Do you know if there is something similar to "truss" or
"strace" in the UNIX world so that I can see where the program hangs?
Thank you very much for your help in advance.


Kind regards

Siegmar



--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832      70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de








--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] error compiling openmpi-1.6.1 on Windows 7

[Shiqing Fan]

Hi Siegmar,

Could you please send the output of ompi_info command under you 64 bit 
env? And could you please also check if you have CCP or HPC pack 
installed? The incorrect configuration of that might cause Open MPI hanging.



Regards,
Shiqing

On 2012-08-29 12:33 PM, Siegmar Gross wrote:

Hi Shiqing,


It seems that the runtime environment is messed up with the different
versions of Open MPI. I suggest you completely remove all the
installations and install 1.6.1 again (just build the installation
project again). It should work without any problem under Cygwin too.

I removed openmpi-1.6 und rebuilt openmpi-1.6.1. Now I can compile and
run a program in 32-bit mode but have still some problems.

D:\...\prog\mpi\small_prog>mpicc init_finalize.c
Microsoft (R) 32-Bit C/C++-Optimierungscompiler Version
   16.00.40219.01 für 80x86
Copyright (C) Microsoft Corporation. Alle Rechte vorbehalten.

init_finalize.c
Microsoft (R) Incremental Linker Version 10.00.40219.01
Copyright (C) Microsoft Corporation.  All rights reserved.

/out:init_finalize.exe
"/LIBPATH:C:\Program Files (x86)\openmpi-1.6.1\bin/../lib"
libmpi.lib
libopen-pal.lib
libopen-rte.lib
advapi32.lib
Ws2_32.lib
shlwapi.lib
init_finalize.obj

D:\...\prog\mpi\small_prog>mpiexec init_finalize.exe
-
Sorry!  You were supposed to get help about:
 invalid if_inexclude
But I couldn't open the help file:
 D:\...\prog\mpi\small_prog\..\share\openmpi\help-mpi-btl-tcp.txt:
 No such file or directory.  Sorry!
-

Hello!


Why does "mpiexec" look for the help file relativ to my current
program and not relative to itself? The file is part of the
package.

dir "c:\Program Files (x86)\openmpi-1.6.1\share\openmpi\help-mpi-btl-tcp.txt"
...
03.04.2012  16:30   631 help-mpi-btl-tcp.txt

Must I change something in the source code or can I set an environment
variable for help files? Why does "mpiexec" want to give some help at all?
I don't get this message for openmpi-1.5.1.


D:\...\prog\mpi\small_prog>mpicc init_finalize.c
Microsoft (R) 32-Bit C/C++-Optimierungscompiler Version 16.00.40219.01
   für 80x86
Copyright (C) Microsoft Corporation. Alle Rechte vorbehalten.

init_finalize.c
Microsoft (R) Incremental Linker Version 10.00.40219.01
Copyright (C) Microsoft Corporation.  All rights reserved.

/out:init_finalize.exe
"/LIBPATH:C:/Program Files (x86)/openmpi-1.5.1/lib"
libmpi.lib
libopen-pal.lib
libopen-rte.lib
advapi32.lib
Ws2_32.lib
shlwapi.lib
init_finalize.obj

D:\...\prog\mpi\small_prog>mpiexec init_finalize.exe
Hello!
D:\...\prog\mpi\small_prog>





I can also compile in 64-bit mode but the program hangs.


D:\...\prog\mpi\small_prog>mpicc init_finalize.c

Microsoft (R) C/C++-Optimierungscompiler Version 16.00.40219.01 für x64
Copyright (C) Microsoft Corporation. Alle Rechte vorbehalten.

init_finalize.c
Microsoft (R) Incremental Linker Version 10.00.40219.01
Copyright (C) Microsoft Corporation.  All rights reserved.

/out:init_finalize.exe
"/LIBPATH:C:\Program Files\openmpi-1.6.1\bin/../lib"
libmpi.lib
libopen-pal.lib
libopen-rte.lib
advapi32.lib
Ws2_32.lib
shlwapi.lib
init_finalize.obj

D:\...\prog\mpi\small_prog>mpiexec init_finalize.exe
^C
D:\...\prog\mpi\small_prog>


It's the same if I compile a 64-bit program with openmpi-1.5.1. The program
itself is very small.

#include 
#include 
#include "mpi.h"

int main (int argc, char *argv[])
{
   MPI_Init (, );
   printf ("Hello!\n");
   MPI_Finalize ();
   return EXIT_SUCCESS;
}


Any ideas why the 64-bit version hangs? Thank you very much for any help
in advance.


Kind regards

Siegmar


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] error compiling openmpi-1.6.1 on Windows 7

[Shiqing Fan]

d to "yes"
OMPI_RELEASE_BUILD: "no" changed to "yes"
OPAL_ENABLE_HETEREOGENEOUS:SUPPORT: "no" changed to "yes"
OPAL_ENABLE_IPV6:  "yes" changed to "no"
OPAL_ENABLE_MULTI_THREADS: "no" changed to "yes"

I also selected "Release" in "Visual Studio". Unfortunately I got the
following error ("void *" cannot be converted to "void **").

Fehler  77  error C2440: '=': 'void *' kann nicht in 'void **'
konvertiert werden
...\openmpi-1.6.1\ompi\mca\osc\rdma\osc_rdma_data_move.c
10991   libmpi

Fehler  90  error LNK1181: Eingabedatei "..\..\..\Release\libmpi.lib"
kann nicht geöffnet werden.
...\openmpi-1.6.1-Windows_VS2010_x32\ompi\tools\ompi-server\LINK
ompi-server

Fehler  94  error LNK1181: Eingabedatei "..\..\..\Release\libmpi.lib"
kann nicht geöffnet werden.
...\openmpi-1.6.1-Windows_VS2010_x32\ompi\tools\ompi_info\LINK
ompi_info

Fehler  162 error LNK1181: Eingabedatei "..\..\..\Release\libmpi.lib"
kann nicht geöffnet werden.
...\openmpi-1.6.1-Windows_VS2010_x32\ompi\mpi\cxx\LINK
libmpi_cxx


I get also a lot of warnings, from wich I have listed a few.


Warnung 1   warning C4005: 'PACKAGE_BUGREPORT': Makro-Neudefinition
...\openmpi-1.6.1\opal\event\win32-code\config.h
185 1   libopen-pal
Warnung 2   warning C4005: 'PACKAGE_NAME': Makro-Neudefinition
...\openmpi-1.6.1\opal\event\win32-code\config.h
188 1   libopen-pal
Warnung 3   warning C4005: 'PACKAGE_STRING': Makro-Neudefinition
...\openmpi-1.6.1\opal\event\win32-code\config.h
191 1   libopen-pal
Warnung 4   warning C4005: 'PACKAGE_TARNAME': Makro-Neudefinition
...\openmpi-1.6.1\opal\event\win32-code\config.h
194 1   libopen-pal
Warnung 5   warning C4005: 'PACKAGE_VERSION': Makro-Neudefinition
...\openmpi-1.6.1\opal\event\win32-code\config.h
197 1   libopen-pal
Warnung 6   warning C4005: '__func__': Makro-Neudefinition
...\openmpi-1.6.1\opal\event\win32-code\config.h
212 1   libopen-pal
Warnung 7   warning C4013: 'opal_event_warn' undefiniert;
 Annahme: extern mit Rückgabetyp int
...\openmpi-1.6.1\opal\event\WIN32-Code\win32.c
170 1   libopen-pal
Warnung 8   warning C4005: 'INT8_MIN': Makro-Neudefinition
C:\Program Files (x86)\Microsoft Visual Studio 10.0\VC\include\stdint.h
72  1   libopen-pal
Warnung 9   warning C4005: 'INT16_MIN': Makro-Neudefinition
C:\Program Files (x86)\Microsoft Visual Studio 10.0\VC\include\stdint.h
73  1   libopen-pal
Warnung 10  warning C4005: 'INT32_MIN': Makro-Neudefinition
C:\Program Files (x86)\Microsoft Visual Studio 10.0\VC\include\stdint.h
74  1   libopen-pal
Warnung 11  warning C4005: 'INT8_MAX': Makro-Neudefinition
C:\Program Files (x86)\Microsoft Visual Studio 10.0\VC\include\stdint.h
76  1   libopen-pal
Warnung 12  warning C4005: 'INT16_MAX': Makro-Neudefinition
C:\Program Files (x86)\Microsoft Visual Studio 10.0\VC\include\stdint.h
77  1   libopen-pal
Warnung 13  warning C4005: 'INT32_MAX': Makro-Neudefinition
C:\Program Files (x86)\Microsoft Visual Studio 10.0\VC\include\stdint.h
78  1   libopen-pal
Warnung 14  warning C4005: 'UINT8_MAX': Makro-Neudefinition
C:\Program Files (x86)\Microsoft Visual Studio 10.0\VC\include\stdint.h
79  1   libopen-pal
Warnung 15  warning C4005: 'UINT16_MAX': Makro-Neudefinition
C:\Program Files (x86)\Microsoft Visual Studio 10.0\VC\include\stdint.h
80  1   libopen-pal
Warnung 16  warning C4005: 'UINT32_MAX': Makro-Neudefinition
C:\Program Files (x86)\Microsoft Visual Studio 10.0\VC\include\stdint.h
81  1   libopen-pal
Warnung 17  warning C4018: '<': Konflikt zwischen 'signed' und 'unsigned'
...\openmpi-1.6.1-Windows_VS2010_x32\opal\keyval_lex.c
libopen-pal
Warnung 18  warning C4273: '_isatty': Inkonsistente DLL-Bindung.
...\openmpi-1.6.1-Windows_VS2010_x32\opal\keyval_lex.c
libopen-pal
...

What can I do to get around the error so that I can compile Open MPI?
Thank you very much for any suggestions in advance.

Kind regards

Siegmar


_______
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de



_______
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users





--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] error compiling openmpi-1.6.1 on Windows 7

[Shiqing Fan]

bopen-pal
...

What can I do to get around the error so that I can compile Open MPI?
Thank you very much for any suggestions in advance.

Kind regards

Siegmar


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users





--
-----------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] compilation on windows 7 64-bit

[Shiqing Fan]

ed in function "int __cdecl 
MpCommProbe(struct MpComm_s *,int,int,struct MpStatus_s *)" 
(?MpCommProbe@@YAHPAUMpComm_s@@HHPAUMpStatus_s@@@Z)


como_mplib.lib(mpcomm.obj) : error LNK2019: unresolved external symbol 
__imp__MPI_Barrier referenced in function "int __cdecl 
MpCommBarrier(struct MpComm_s *)" (?MpCommBarrier@@YAHPAUMpComm_s@@@Z)


como_mplib.lib(mpcomm.obj) : error LNK2019: unresolved external symbol 
__imp__MPI_Reduce referenced in function "int __cdecl 
MpCommReduce(struct MpComm_s *,void const *,void *,int,enum 
Dtype_e,enum MpCommOp_e,int)" 
(?MpCommReduce@@YAHPAUMpComm_s@@PBXPAXHW4Dtype_e@@W4MpCommOp_e@@H@Z)


como_mplib.lib(mpcomm.obj) : error LNK2019: unresolved external symbol 
__imp__MPI_Allreduce referenced in function "int __cdecl 
MpCommAllreduce(struct MpComm_s *,void const *,void *,int,enum 
Dtype_e,enum MpCommOp_e)" 
(?MpCommAllreduce@@YAHPAUMpComm_s@@PBXPAXHW4Dtype_e@@W4MpCommOp_e@@@Z)


como_mplib.lib(mpcomm.obj) : error LNK2019: unresolved external symbol 
__imp__MPI_Waitall referenced in function "int __cdecl 
MpCommWaitall(struct MpRequest_s *,struct MpStatus_s * const)" 
(?MpCommWaitall@@YAHPAUMpRequest_s@@QAUMpStatus_s@@@Z)


como_mplib.lib(mpcomm.obj) : error LNK2001: unresolved external symbol 
__imp__ompi_mpi_byte


como_mplib.lib(mpcomm.obj) : error LNK2001: unresolved external symbol 
__imp__ompi_mpi_double


como_mplib.lib(mpcomm.obj) : error LNK2001: unresolved external symbol 
__imp__ompi_mpi_float


como_mplib.lib(mpcomm.obj) : error LNK2001: unresolved external symbol 
__imp__ompi_mpi_long


como_mplib.lib(mpcomm.obj) : error LNK2001: unresolved external symbol 
__imp__ompi_mpi_int


como_mplib.lib(mpenv.obj) : error LNK2019: unresolved external symbol 
__imp__MPI_Errhandler_set referenced in function "int __cdecl 
MpEnvConstr(int *,char * * * const)" (?MpEnvConstr@@YAHPAHQAPAPAD@Z)


como_mplib.lib(mpenv.obj) : error LNK2001: unresolved external symbol 
__imp__ompi_mpi_errors_return


como_mplib.lib(mpenv.obj) : error LNK2019: unresolved external symbol 
__imp__MPI_Init referenced in function "int __cdecl MpEnvConstr(int 
*,char * * * const)" (?MpEnvConstr@@YAHPAHQAPAPAD@Z)


como_mplib.lib(mpenv.obj) : error LNK2019: unresolved external symbol 
__imp__MPI_Finalize referenced in function "void __cdecl 
MpEnvFree(void)" (?MpEnvFree@@YAXXZ)


Alan

*From:*users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] 
*On Behalf Of *Shiqing Fan

*Sent:* Friday, July 27, 2012 7:52 AM
*To:* Open MPI Users
*Cc:* Damien
*Subject:* Re: [OMPI users] compilation on windows 7 64-bit


FYI. I've just made an update for this issue in trunk. There will be 
no need to define this flags in the next releases.



Shiqing

On 2012-07-27 12:24 AM, Damien wrote:

Do you have

OMPI_IMPORTS, OPAL_IMPORTS and ORTE_IMPORTS

  


defined in your preprocessor flags?  You need those.

  


Damien

On 26/07/2012 3:56 PM, Sayre, Alan N wrote:

I'm trying to replace the usage of platform mpi with open mpi.
I am trying to compile on Windows 7 64 bit using Visual Studio
2010. I have added the paths to the openmpi include and
library directories and added the libmpid.lib and
libmpi_cxxd.lib to the linker input. The application compiles
(find the mpi headers). When it tries to link I get the
following output:

como_mplib.lib(mpcomm.obj) : error LNK2019: unresolved
external symbol _MPI_Comm_remote_size referenced in function
"struct MpComm_s * __cdecl MpCommSpawn(char const *,char const
* * const,int,enum Bool_e)"
(?MpCommSpawn@@YAPAUMpComm_s@@PBDQAPBDHW4Bool_e@@@Z)

como_mplib.lib(mpcomm.obj) : error LNK2019: unresolved
external symbol _MPI_Comm_spawn referenced in function "struct
MpComm_s * __cdecl MpCommSpawn(char const *,char const * *
const,int,enum Bool_e)"
(?MpCommSpawn@@YAPAUMpComm_s@@PBDQAPBDHW4Bool_e@@@Z)

como_mplib.lib(mpcomm.obj) : error LNK2001: unresolved
external symbol _ompi_mpi_info_null

como_mplib.lib(mpcomm.obj) : error LNK2001: unresolved
external symbol _ompi_mpi_comm_self

como_mplib.lib(mpcomm.obj) : error LNK2001: unresolved
external symbol _ompi_mpi_comm_null

como_mplib.lib(mpcomm.obj) : error LNK2001: unresolved
external symbol _ompi_mpi_op_sum

como_mplib.lib(mpcomm.obj) : error LNK2001: unresolved
external symbol _ompi_mpi_op_min

como_mplib.lib(mpcomm.obj) : error LNK2001: unresolved
external symbol _ompi_mpi_op_max

como_mplib.lib(mpcomm.obj) : error LNK2019: unresolved
external symbol _MPI_Intercomm_create referenced in function
"int __cdecl MpCommCreateCommunicators(struct MpComm_s *
*,struct MpComm_s * *)"
(?MpCommCreateCommunicators@@YAHPAPAUMpComm_s@@0@Z)

Re: [OMPI users] compilation on windows 7 64-bit

[Shiqing Fan]

m_s@@PAXHW4Dtype_e@@HHPAUMpRequest_s@@@Z)


como_mplib.lib(mpcomm.obj) : error LNK2001: unresolved external 
symbol _ompi_mpi_char


como_mplib.lib(mpcomm.obj) : error LNK2019: unresolved external 
symbol _MPI_Probe referenced in function "int __cdecl 
MpCommProbe(struct MpComm_s *,int,int,struct MpStatus_s *)" 
(?MpCommProbe@@YAHPAUMpComm_s@@HHPAUMpStatus_s@@@Z)


como_mplib.lib(mpcomm.obj) : error LNK2019: unresolved external 
symbol _MPI_Barrier referenced in function "int __cdecl 
MpCommBarrier(struct MpComm_s *)" (?MpCommBarrier@@YAHPAUMpComm_s@@@Z)


como_mplib.lib(mpcomm.obj) : error LNK2019: unresolved external 
symbol _MPI_Reduce referenced in function "int __cdecl 
MpCommReduce(struct MpComm_s *,void const *,void *,int,enum 
Dtype_e,enum MpCommOp_e,int)" 
(?MpCommReduce@@YAHPAUMpComm_s@@PBXPAXHW4Dtype_e@@W4MpCommOp_e@@H@Z)


como_mplib.lib(mpcomm.obj) : error LNK2019: unresolved external 
symbol _MPI_Allreduce referenced in function "int __cdecl 
MpCommAllreduce(struct MpComm_s *,void const *,void *,int,enum 
Dtype_e,enum MpCommOp_e)" 
(?MpCommAllreduce@@YAHPAUMpComm_s@@PBXPAXHW4Dtype_e@@W4MpCommOp_e@@@Z)


como_mplib.lib(mpcomm.obj) : error LNK2019: unresolved external 
symbol _MPI_Waitall referenced in function "int __cdecl 
MpCommWaitall(struct MpRequest_s *,struct MpStatus_s * const)" 
(?MpCommWaitall@@YAHPAUMpRequest_s@@QAUMpStatus_s@@@Z)


como_mplib.lib(mpcomm.obj) : error LNK2001: unresolved external 
symbol _ompi_mpi_byte


como_mplib.lib(mpcomm.obj) : error LNK2001: unresolved external 
symbol _ompi_mpi_double


como_mplib.lib(mpcomm.obj) : error LNK2001: unresolved external 
symbol _ompi_mpi_float


como_mplib.lib(mpcomm.obj) : error LNK2001: unresolved external 
symbol _ompi_mpi_long


como_mplib.lib(mpcomm.obj) : error LNK2001: unresolved external 
symbol _ompi_mpi_int


como_mplib.lib(mpenv.obj) : error LNK2019: unresolved external symbol 
_MPI_Errhandler_set referenced in function "int __cdecl 
MpEnvConstr(int *,char * * * const)" (?MpEnvConstr@@YAHPAHQAPAPAD@Z)


como_mplib.lib(mpenv.obj) : error LNK2001: unresolved external symbol 
_ompi_mpi_errors_return


como_mplib.lib(mpenv.obj) : error LNK2019: unresolved external symbol 
_MPI_Init referenced in function "int __cdecl MpEnvConstr(int *,char 
* * * const)" (?MpEnvConstr@@YAHPAHQAPAPAD@Z)


como_mplib.lib(mpenv.obj) : error LNK2019: unresolved external symbol 
_MPI_Finalize referenced in function "void __cdecl MpEnvFree(void)" 
(?MpEnvFree@@YAXXZ)


What am I missing?

Thanks in advance for any assistance.

Alan



*This message is intended only for the individual or entity to which 
it is addressed and contains information that is proprietary to The 
Babcock & Wilcox Company and/or its affiliates, or may be otherwise 
confidential. If the reader of this message is not the intended 
recipient, or the employee agent responsible for delivering the 
message to the intended recipient, you are hereby notified that any 
dissemination, distribution or copying of this communication is 
strictly prohibited. If you have received this communication in 
error, please notify the sender immediately by return e-mail and 
delete this message from your computer. Thank you. *




___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users




_______
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
-----------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] Fortran90 Bindings

[Shiqing Fan]

No it's not related to the version of Visual Studio.

On 2012-07-26 4:08 AM, Kumar, Sudhir wrote:


I am wondering if it is related to the version of Visual Studio, I am 
using Visual Studio 2005.


*Sudhir Kumar*

*From:*users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] 
*On Behalf Of *Damien

*Sent:* Wednesday, July 25, 2012 3:35 PM
*To:* Open MPI Users
*Subject:* Re: [OMPI users] Fortran90 Bindings

Hmmm.  My 64-bit builds create mpif77.exe, libmpi_f77.lib and 
libmpi_f77.dll, and they work.


Damien

On 25/07/2012 10:11 AM, Kumar, Sudhir wrote:

Hi

I am new to Open MPI so please pardon my ignorance, I just came
across an article which refers to F77 bindings available for 32
bit windows only, It was as of June. Has something changed since then,

http://www.open-mpi.org/community/lists/users/2012/06/19525.php

Thanks so much.

*From:*users-boun...@open-mpi.org
<mailto:users-boun...@open-mpi.org>
[mailto:users-boun...@open-mpi.org] *On Behalf Of *Damien
*Sent:* Wednesday, July 25, 2012 10:52 AM
*To:* Open MPI Users
*Subject:* Re: [OMPI users] Fortran90 Bindings

Sudhir,

F77 works on both.

Damien


On 25/07/2012 8:55 AM, Kumar, Sudhir wrote:

Hi

I have one more related question. Is the F77 bindings
available for both 64bit and 32 bit windows environments or
just for the 32 bit environment.

Thanks

*From:*users-boun...@open-mpi.org
<mailto:users-boun...@open-mpi.org>
[mailto:users-boun...@open-mpi.org] *On Behalf Of *Damien
*Sent:* Wednesday, July 18, 2012 10:11 AM
*To:* Open MPI Users
*Subject:* Re: [OMPI users] Fortran90 Bindings

Hmmm.  6 months ago there weren't F90 bindings in the Windows
version (the F90 bindings are large and tricky).  It's an
option you can select when you compile it yourself, but
looking at the one I just did a month ago, there's still no
mpif90.exe built, so I'd say that's still not supported on
Windows.  :-(

Damien

On 18/07/2012 9:00 AM, Kumar, Sudhir wrote:

Hi had meant to say if Fortran90 bindings for Windows

*Sudhir Kumar*

*From:*users-boun...@open-mpi.org
<mailto:users-boun...@open-mpi.org>
[mailto:users-boun...@open-mpi.org] *On Behalf Of *Damien
*Sent:* Wednesday, July 18, 2012 9:56 AM
*To:* Open MPI Users
*Subject:* Re: [OMPI users] Fortran90 Bindings

Yep.

On 18/07/2012 8:53 AM, Kumar, Sudhir wrote:

Hi

Just wondering if Fortran90 bindings are available for
OpemMPI 1.6

Thanks

*Sudhir Kumar*







___

users mailing list

us...@open-mpi.org  <mailto:us...@open-mpi.org>

http://www.open-mpi.org/mailman/listinfo.cgi/users






___

users mailing list

us...@open-mpi.org  <mailto:us...@open-mpi.org>

http://www.open-mpi.org/mailman/listinfo.cgi/users





___

users mailing list

us...@open-mpi.org  <mailto:us...@open-mpi.org>

http://www.open-mpi.org/mailman/listinfo.cgi/users




___

users mailing list

us...@open-mpi.org  <mailto:us...@open-mpi.org>

http://www.open-mpi.org/mailman/listinfo.cgi/users



___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
-----------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] Getting MPI to access processes on a 2nd computer.

[Shiqing Fan]

Hi,

The Open MPI potentially uses WMI to launch remote processes, so the WMI 
has to be configured correctly. There are two links talking about how to 
set it up in README.WINDOWS file:


http://msdn.microsoft.com/en-us/library/aa393266(VS.85).aspx
http://community.spiceworks.com/topic/578

For testing whether it works or not, you can use following command:
wmic /node:remote_node_ip process call create notepad.exe

then log onto the other Windows, check in the task manager if the 
notepad.exe process is created (don't forget to delete it afterwards).


If that works, this command will also work:
mpirun -np 2 -host host1 host2 notepad.exe

Please try to run the above two test commands, if they all works you 
application should also work. Just let me know if you have any question 
or trouble with that.



Shiqing

On 2012-07-03 8:53 PM, vimalmat...@eaton.com wrote:


Hi,

I'm trying to run an MPI code using processes on a remote machine.

I've connected the 2 machines using a crossover cable and they are 
communicating with each other(I'm getting ping replies and I can 
access drives on one another).


When I run mpiexec --host /system_name/ MPI_Test.exe, I get the 
following error:


C:\OpenMPI\openmpi-1.6\build\Debug>mpiexec -host SOUMIWHP4500449 
MPI_Test.exe


connecting to SOUMIWHP4500449

username:C9995799

password:**

Save Credential?(Y/N) N

[SOUMIWHP5003567:01728] Could not connect to namespace cimv2 on node 
SOUMIWHP450


0449. Error code =-2147023174

--

mpiexec was unable to start the specified application as it 
encountered an error


.

More information may be available above.

--

[SOUMIWHP5003567:01728] [[38316,0],0] ORTE_ERROR_LOG: A message is 
attempting to


be sent to a process whose contact information is unknown in file 
..\..\..\open


mpi-1.6\orte\mca\rml\oob\rml_oob_send.c at line 145

[SOUMIWHP5003567:01728] [[38316,0],0] attempted to send to 
[[38316,0],1]: tag 1


[SOUMIWHP5003567:01728] [[38316,0],0] ORTE_ERROR_LOG: A message is 
attempting to


be sent to a process whose contact information is unknown in file 
..\..\..\open


mpi-1.6\orte\orted\orted_comm.c at line 126

Could anyone tell me what I'm missing?

I've configured MPI on VS Express 2010 and I'm able to run MPI 
programs on one system.


On the other computer, I pasted the MPI_Test.exe file in the same 
location as the calling computer.


Thanks,
Vimal



___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] Mpiexec hanging when running "hello world" on 2 EC2 windows instances

[Shiqing Fan]

Hi Peter,

The WMI worked for you, that's great. Was it difficult for you to 
configure everything?


For the hanging problem, it's quite similar to another thread: 
http://www.open-mpi.org/community/lists/users/2012/01/18128.php


I wasn't able to solve that one yet, it's a complicated one. But the 
easy solution is to switch the send and recv sequence for root process. 
Could you please have a try on that?



Shiqing


On 2012-06-23 8:40 PM, Peter Soukalopoulos wrote:


Hi Shiqing,

No problems executing notepad.exe remotely -- process with id 2416 
created on remote node.


From 10.244.166.37

C:\Users\greenbutton>wmic /node:10.243.1.134 process call create 
notepad.exe


Executing (Win32_Process)->Create()

Method execution successful.

Out Parameters:

instance of __PARAMETERS

{

ProcessId = 2416;

ReturnValue = 0;

};

No problems running the MPI command on notepad.exe

From 10.244.166.37

C:\Users\greenbutton>mpirun -np 2 -host 10.244.166.37,10.243.1.134 
c:\windows\system32\notepad.exe


connecting to 10.243.1.134

username:greenbutton

password:*

Save Credential?(Y/N) n

--

mpirun noticed that the job aborted, but has no info as to the process

that caused that situation.

--

(Works; blocked until notepad.exe killed on both nodes)

Running my command MPIHello still does not work across nodes; I 
believe there is a MPI communication problem between the processes, 
ie. MPI_Send/Recv. It worked with 2 processes but not 4. How do I go 
about resolving that? Is there a problem with the build settings of my 
executable?


C:\mpi\exe>mpirun -np 2 -host 10.244.166.37,10.243.1.134 MPIHello.exe

connecting to 10.243.1.134

username:greenbutton

password:*

Save Credential?(Y/N) n

WE have 2 processors

Hello 1 Processor 1 at node AMAZONA-BMCKVD6 reporting for duty

(works -- output from rank 1)

C:\mpi\exe>

C:\mpi\exe>mpirun -np 4 -host 10.244.166.37,10.243.1.134 MPIHello.exe

connecting to 10.243.1.134

username:greenbutton

password:*

Save Credential?(Y/N) n

WE have 4 processors

(hangs -- no output from ranks 1,2 or 3)

Please assist.

/Regards,/

/Peter/

*From:*Shiqing Fan [mailto:f...@hlrs.de]
*Sent:* Friday, 22 June 2012 8:11 p.m.
*To:* Open MPI Users
*Cc:* Peter Soukalopoulos
*Subject:* Re: [OMPI users] Mpiexec hanging when running "hello world" 
on 2 EC2 windows instances


Hi Peter,

The Open MPI potentially uses WMI to launch remote processes, so the 
WMI has to be configured correctly. There are two links talking about 
how to set it up in README.WINDOWS file:


http://msdn.microsoft.com/en-us/library/aa393266(VS.85).aspx 
<http://msdn.microsoft.com/en-us/library/aa393266%28VS.85%29.aspx>

http://community.spiceworks.com/topic/578

For testing whether it works or not, you can use following command:
wmic /node:remote_node_ip process call create notepad.exe

then log onto the other Windows, check in the task manager if the 
notepad.exe process is created (don't forget to delete it afterwards).


If that works, this command will also work:
mpirun -np 2 -host host1 host2 notepad.exe

Please try to run the above two test commands, if they all works you 
application should also work. Just let me know if you have any 
question or trouble with that.



Shiqing



On 2012-06-22 7:00 AM, Peter Soukalopoulos wrote:

I am a new comer to Open MPI.

I have spent the last day trying to diagnose why a "hello world"
MPI application compiled with OpenMPI v1.6.1 (64 bit) hangs when
run on two EC2 Windows instances. I note they are running on
different subnets so I'm using the mca btl_tcp_if_include
10.0.0.0/8 parameter. My two hosts are
10.242.73.81,10.116.114.238. I've placed the executable in the
same path on both machines.

Diagnostic info requested is attached along with sample
application source.

When I run two processes on one instance -- the command succeeds:

C:\mpi\exe>mpiexec -n 2 -host 10.242.73.81 --mca
btl_tcp_if_include 10.0.0.0/8 MPIHello.exe

WE have 2 processors

Hello 1 Processor 1 at node AMAZONA-BMCKVD6 reporting for duty

When I run across two hosts, the executable is launched on both
instances but the process hangs:

C:\mpi\exe>mpiexec -n 4 -host 10.242.73.81,10.116.114.238 --mca
btl_tcp_if_include 10.0.0.0/8 MPIHello.exe

connecting to 10.116.114.238

username:greenbutton

password:*

Save Credential?(Y/N) n

WE have 4 processors

Re-running with debug:

C:\mpi\exe>mpiexec -n 4 -host 10.242.73.81,10.116.114.238 -d --mca
btl_tcp_if_include 10.0.0.0/8 MPIHello.exe

[AMAZONA-BMCKVD6:01240] procdir:

C:\Users\GREENB~1\AppData\Local\Temp\2\openmpi-sessions-greenbutton@AMAZONA-BMCKVD6_0\63746\0\0


[AMAZONA-BMCKVD6:01240] jobdir

Re: [OMPI users] Using OpenMPI on a network

[Shiqing Fan]

ct:* Re: [OMPI users] Building MPI on Windows

Hmmm.  Two things.  Can you run helloworldMPI.exe on it's own?  It
should output "Number of threads = 1, My rank = 0"

Also, can you post the output of ompi_info ?  I think you might
still have some path mixups.  A successful OpenMPI build with this
simple program should just work.

If you still have the other OpenMPIs installed from the binaries,
you might want to try uninstalling all of them and rebooting. 
Also if you rebuilt OpenMPI and helloworldMPI with VS 2010, make

sure that helloworldMPI is actually linked to those VS2010 OpenMPI
libs by setting the right lib path in the Linker options.  Linking
to VS2008 libs and trying to run with VS2010 dlls/exes could cause
problems too.

Damien

On 15/06/2012 11:44 AM, vimalmat...@eaton.com
<mailto:vimalmat...@eaton.com> wrote:

Hi Damien,

I installed MS Visual Studio 2010 and tried the whole procedure
again and it worked!

That's the great news.

Now the bad news is that I'm trying to run the program again using
mpiexec and it won't!

I get these error messages:

orte_rml_base_select failed

orte_ess_set_name failed, with a bunch of text saying it could be
due to configuration or environment problems and will make sense
only to an OpenMPI developer.

Help!

--

Vimal

*From:*users-boun...@open-mpi.org
<mailto:users-boun...@open-mpi.org>
[mailto:users-boun...@open-mpi.org] *On Behalf Of *Damien
*Sent:* Thursday, June 14, 2012 4:55 PM
*To:* Open MPI Users
*Subject:* Re: [OMPI users] Building MPI on Windows

You did build the project, right?  The helloworldMPI.exe is in the
Debug directory?

On 14/06/2012 1:49 PM, vimalmat...@eaton.com
<mailto:vimalmat...@eaton.com> wrote:

No luck.

Output:

*Microsoft Windows [Version 6.1.7601]*

*Copyright (c) 2009 Microsoft Corporation.  All rights reserved.*

**

*C:\Users\...>cd "C:\Users\C9995799\Downloads\helloworldMPI\Debug"*

**

*C:\Users\...\Downloads\helloworldMPI\Debug>mpiexec -n 2
helloworldMPI.exe*

*--*

*mpiexec was unable to launch the specified application as it
could not find an e*

*xecutable:*

**

*Executable: helloworldMPI.exe*

*Node: SOUMIWHP5003567*

**

*while attempting to start process rank 0.*

*--*

*2 total processes failed to start*

**

*C:\Users\...\Downloads\helloworldMPI\Debug>*

--

Vimal

*From:*users-boun...@open-mpi.org
<mailto:users-boun...@open-mpi.org>
[mailto:users-boun...@open-mpi.org] *On Behalf Of *Damien
*Sent:* Thursday, June 14, 2012 3:38 PM
*To:* Open MPI Users
*Subject:* Re: [OMPI users] Building MPI on Windows

Here's a MPI Hello World project based on your code.  It runs fine
on my machine.  You'll need to change the include and lib paths as
we discussed before to match your paths, and copy those bin files
over to the Debug directory.

Run it with this to start:  "mpiexec -n 1 helloworldMPI.exe". 
Then change the -n 1 to -n x where x is the number of cores you

have.  Say yes to allowing mpiexec firewall access if that comes up.

If this bombs out, there's something wrong on your machine.

Damien





___

users mailing list

us...@open-mpi.org  <mailto:us...@open-mpi.org>

http://www.open-mpi.org/mailman/listinfo.cgi/users




___

users mailing list

us...@open-mpi.org  <mailto:us...@open-mpi.org>

http://www.open-mpi.org/mailman/listinfo.cgi/users




___

users mailing list

us...@open-mpi.org  <mailto:us...@open-mpi.org>

http://www.open-mpi.org/mailman/listinfo.cgi/users



___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] Mpiexec hanging when running "hello world" on 2 EC2 windows instances

[Shiqing Fan]

iately if you 
or your employer does not consent to Internet e-mail for messages of 
this kind.


*
** **
** WARNING:  This email contains an attachment of a very suspicious type.  **
** You are urged NOT to open this attachment unless you are absolutely **
** sure it is legitimate.  Opening this attachment may cause irreparable   **
** damage to your computer and your files.  If you have any questions  **
** about the validity of this message, PLEASE SEEK HELP BEFORE OPENING IT. **
** **
** This warning was added by the IU Computer Science Dept. mail scanner.   **
*



___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
-----------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] Using OpenMPI on a network

[Shiqing Fan]

SOUMIWHP5003567*

**

*while attempting to start process rank 0.*

*--*

*2 total processes failed to start*

**

*C:\Users\...\Downloads\helloworldMPI\Debug>*

--

Vimal

*From:*users-boun...@open-mpi.org <mailto:users-boun...@open-mpi.org> 
[mailto:users-boun...@open-mpi.org] *On Behalf Of *Damien

*Sent:* Thursday, June 14, 2012 3:38 PM
*To:* Open MPI Users
*Subject:* Re: [OMPI users] Building MPI on Windows

Here's a MPI Hello World project based on your code.  It runs fine on 
my machine. You'll need to change the include and lib paths as we 
discussed before to match your paths, and copy those bin files over to 
the Debug directory.


Run it with this to start:  "mpiexec -n 1 helloworldMPI.exe".  Then 
change the -n 1 to -n x where x is the number of cores you have.  Say 
yes to allowing mpiexec firewall access if that comes up.


If this bombs out, there's something wrong on your machine.

Damien





___
users mailing list
us...@open-mpi.org  <mailto:us...@open-mpi.org>
http://www.open-mpi.org/mailman/listinfo.cgi/users




___
users mailing list
us...@open-mpi.org  <mailto:us...@open-mpi.org>
http://www.open-mpi.org/mailman/listinfo.cgi/users


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] Building MPI on Windows

[Shiqing Fan]

rg] On  
Behalf Of vimalmat...@eaton.com

Sent: Wednesday, June 13, 2012 2:09 PM
To: us...@open-mpi.org; us...@open-mpi.org
Subject: Re: [OMPI users] Building MPI on Windows


I've tried the Cygwin way.
Been hitting roadblocks for a week now. I've just uninstalled everything  
and started from scratch again.


--
Vimal


-Original Message-
From: users-boun...@open-mpi.org on behalf of Trent Creekmore
Sent: Wed 6/13/2012 2:47 PM
To: 'Open MPI Users'
Subject: Re: [OMPI users] Building MPI on Windows

This may, or may not be helpful, but I have tried the Windows offerings.  
I have never gotten anything to function was expected. Compiling, or the  
available binaries. I think they just don't work at all.




My suggestion which I feel would be easier, and less headache way would  
be to install something like CygWin, which would give you a Unix/Linux  
like environment running under Windows.


You would only need to compile it in CygWin just like the Linux/Unix  
docs say to do.




I don't know if anyone else has done it this way or not.





From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On  
Behalf Of vimalmat...@eaton.com

Sent: Wednesday, June 13, 2012 1:32 PM
To: us...@open-mpi.org
Subject: [OMPI users] Building MPI on Windows



Hi,



I'm trying to follow the ReadMe file to build OpenMPI on Windows:



Step 1: Untar the contrib/platform/win32/ompi-static.tgz tarball in the  
root directory of the Open MPI distribution.


I do not have ompi-static.tgz in the mentioned path.



Step 2: Go in the ompi/datatype subdirectory in the Open MPI  
distribution and copy the following:


datatype_pack.c   to datatype_pack_checksum.c

datatype_unpack.c to datatype_unpack_checksum.c

I do not see these files in the mentioned path.



Step 4: Open the Open MPI project (.sln file) from the root directory of  
the distribution.


I don't have a .sln file anywhere



Help anyone? Shiqing?



Thanks,

Vimal



From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On  
Behalf Of vimalmat...@eaton.com

Sent: Wednesday, June 13, 2012 11:21 AM
To: f...@hlrs.de
Cc: us...@open-mpi.org
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)



I did make uninstall. I also deleted the folders of the other  
implementation.


I ran ./configure and make all install.

At the end of the make I saw a bunch of errors for the makefiles. I've  
attached the .log and .out files.




Please tell me if I'm on the right track.



Thanks,

Vimal



From: Shiqing Fan [mailto:f...@hlrs.de]
Sent: Wednesday, June 13, 2012 9:37 AM
To: Mathew, Vimal
Cc: Open MPI Users
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)



Hi Vimal,

I'm not sure how you can uninstall  the other one, may be 'make  
uninstall' from the source? Or you may also ask in their mailing list.


Another solution might use the full path for the executables, like  
"c:\Program Files\OpenMPI_v1.6-win32\bin\mpicc hello.c" or under Cygwin:  
"/cygdrive/c/Program\ Files/OpenMPI_v1.6-win32/bin/mpicc.exe hello.c".


Of course, I suggest to get rid of the other MPI implementation.

Shiqing


On 2012-06-13 3:17 PM, vimalmat...@eaton.com wrote:

Hi Shiqing,



I installed the LAN/MPI implementation first then the Open MPI  
implementation.


Could this be the problem? If yes, how do I get rid of the LAN/MPI  
implementation?




Thanks,

Vimal



From: Shiqing Fan [mailto:f...@hlrs.de]
Sent: Wednesday, June 13, 2012 4:49 AM
To: Open MPI Users
Cc: Mathew, Vimal
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)



Hi Vimal,

The output looks strange. If you use the installer under Cygwin, mpicc  
shouldn't try to link with liblammpio.* or any library in  
/usr/local/lib. So I guess the mpicc is messed up with some previously  
installed MPI implementations. Could you please verify that 'which  
mpicc' is the one you installed?


Anyway, here I sent some screen shots that how it should look like under  
Cygwin.


1 - run command 'mpicc chello.c'

2 - run command 'mpicc chello.c -o chello'

Regards,
Shiqing


On 2012-06-12 8:44 PM, vimalmat...@eaton.com wrote:

I ran OpenMPI_v1.6-1_win64.exe.
 Now I get this message:
C9995799@SOUMIWHP5003567 ~/openmpi-1.6
$ mpicc hello.c -o hello
WARNING: mpicc expected to find liblammpio.* in /usr/local/lib
WARNING: MPI-2 IO support will be disabled
gcc: hello.c: No such file or directory
mpicc: No such file or directory
--
Vimal


-Original Message-
From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of Jeff Squyres
Sent: Tuesday, June 12, 2012 2:30 PM
To: Open MPI Users
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)

Probably easier to just run the Open MPI binary installer.


On Jun 12, 2012, at 2:24 PM, <vimalmat...@eaton.com>  
<mailto:vimalmat...@eaton.com>  wrote:



So I s

Re: [OMPI users] Building MPI on Windows

[Shiqing Fan]

datatype_pack.c   to datatype_pack_checksum.c

datatype_unpack.c to datatype_unpack_checksum.c

I do not see these files in the mentioned path.



Step 4: Open the Open MPI project (.sln file) from the root directory of  
the distribution.


I don't have a .sln file anywhere



Help anyone? Shiqing?



Thanks,

Vimal



From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On  
Behalf Of vimalmat...@eaton.com

Sent: Wednesday, June 13, 2012 11:21 AM
To: f...@hlrs.de
Cc: us...@open-mpi.org
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)



I did make uninstall. I also deleted the folders of the other  
implementation.


I ran ./configure and make all install.

At the end of the make I saw a bunch of errors for the makefiles. I've  
attached the .log and .out files.




Please tell me if I'm on the right track.



Thanks,

Vimal



From: Shiqing Fan [mailto:f...@hlrs.de]
Sent: Wednesday, June 13, 2012 9:37 AM
To: Mathew, Vimal
Cc: Open MPI Users
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)



Hi Vimal,

I'm not sure how you can uninstall  the other one, may be 'make  
uninstall' from the source? Or you may also ask in their mailing list.


Another solution might use the full path for the executables, like  
"c:\Program Files\OpenMPI_v1.6-win32\bin\mpicc hello.c" or under Cygwin:  
"/cygdrive/c/Program\ Files/OpenMPI_v1.6-win32/bin/mpicc.exe hello.c".


Of course, I suggest to get rid of the other MPI implementation.

Shiqing


On 2012-06-13 3:17 PM, vimalmat...@eaton.com wrote:

Hi Shiqing,



I installed the LAN/MPI implementation first then the Open MPI  
implementation.


Could this be the problem? If yes, how do I get rid of the LAN/MPI  
implementation?




Thanks,

Vimal



From: Shiqing Fan [mailto:f...@hlrs.de]
Sent: Wednesday, June 13, 2012 4:49 AM
To: Open MPI Users
Cc: Mathew, Vimal
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)



Hi Vimal,

The output looks strange. If you use the installer under Cygwin, mpicc  
shouldn't try to link with liblammpio.* or any library in  
/usr/local/lib. So I guess the mpicc is messed up with some previously  
installed MPI implementations. Could you please verify that 'which  
mpicc' is the one you installed?


Anyway, here I sent some screen shots that how it should look like under  
Cygwin.


1 - run command 'mpicc chello.c'

2 - run command 'mpicc chello.c -o chello'

Regards,
Shiqing


On 2012-06-12 8:44 PM, vimalmat...@eaton.com wrote:

I ran OpenMPI_v1.6-1_win64.exe.
 Now I get this message:
C9995799@SOUMIWHP5003567 ~/openmpi-1.6
$ mpicc hello.c -o hello
WARNING: mpicc expected to find liblammpio.* in /usr/local/lib
WARNING: MPI-2 IO support will be disabled
gcc: hello.c: No such file or directory
mpicc: No such file or directory
--
Vimal


-Original Message-
From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of Jeff Squyres
Sent: Tuesday, June 12, 2012 2:30 PM
To: Open MPI Users
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)

Probably easier to just run the Open MPI binary installer.


On Jun 12, 2012, at 2:24 PM, <vimalmat...@eaton.com>  
<mailto:vimalmat...@eaton.com>  wrote:



So I simply download and run OpenMPI_v1.6-1_win64.exe?
Or is there a way to fix the Fortran compiler?
   --
Vimal
   -Original Message-
From: users-boun...@open-mpi.org  
[mailto:users-boun...@open-mpi.org]

On Behalf Of Jeff Squyres
Sent: Tuesday, June 12, 2012 2:20 PM
To: Open MPI Users
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not
found)
   It does not look like you successfully built Open MPI -- it looks  
like




Open MPI's configure script aborted because your Fortran compiler
wasn't
behaving:
   -
checking if Fortran 77 compiler supports COMPLEX*16... yes  
checking

size of Fortran 77 COMPLEX*16... 16 checking alignment of Fortran
COMPLEX*16... 8 checking if Fortran 77 compiler supports  
COMPLEX*32...

no checking for max Fortran MPI handle index... ( 0x7fff <
2147483647 ? 0x7fff : 2147483647 ) checking Fortran value for

.TRUE.

logical type... configure: error: Could not determine value of  
Fortran




.TRUE..  Aborting.
-
   Anything that happened after that is somewhat irrelevant because  
Open

MPI didn't configure properly.
   Looking in config.log, I see why:
   -
configure:44290: checking Fortran value for .TRUE. logical type
configure:44386: gcc -DNDEBUG -g -O2 -finline-functions
-fno-strict-aliasing -I. -c conftest.c
configure:44393: $? = 0
configure:44403: gfortran  -o conftest conftest.o conftestf.f
/usr/lib/gcc/i686-pc-cygwin/4.5.3/../../../../i686-pc-cyg

Re: [OMPI users] Building MPI on Windows

[Shiqing Fan]

..@open-mpi.org
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)



I did make uninstall. I also deleted the folders of the other  
implementation.


I ran ./configure and make all install.

At the end of the make I saw a bunch of errors for the makefiles. I've  
attached the .log and .out files.




Please tell me if I'm on the right track.



Thanks,

Vimal



From: Shiqing Fan [mailto:f...@hlrs.de]
Sent: Wednesday, June 13, 2012 9:37 AM
To: Mathew, Vimal
Cc: Open MPI Users
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)



Hi Vimal,

I'm not sure how you can uninstall  the other one, may be 'make  
uninstall' from the source? Or you may also ask in their mailing list.


Another solution might use the full path for the executables, like  
"c:\Program Files\OpenMPI_v1.6-win32\bin\mpicc hello.c" or under Cygwin:  
"/cygdrive/c/Program\ Files/OpenMPI_v1.6-win32/bin/mpicc.exe hello.c".


Of course, I suggest to get rid of the other MPI implementation.

Shiqing


On 2012-06-13 3:17 PM, vimalmat...@eaton.com wrote:

Hi Shiqing,



I installed the LAN/MPI implementation first then the Open MPI  
implementation.


Could this be the problem? If yes, how do I get rid of the LAN/MPI  
implementation?




Thanks,

Vimal



From: Shiqing Fan [mailto:f...@hlrs.de]
Sent: Wednesday, June 13, 2012 4:49 AM
To: Open MPI Users
Cc: Mathew, Vimal
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)



Hi Vimal,

The output looks strange. If you use the installer under Cygwin, mpicc  
shouldn't try to link with liblammpio.* or any library in  
/usr/local/lib. So I guess the mpicc is messed up with some previously  
installed MPI implementations. Could you please verify that 'which  
mpicc' is the one you installed?


Anyway, here I sent some screen shots that how it should look like under  
Cygwin.


1 - run command 'mpicc chello.c'

2 - run command 'mpicc chello.c -o chello'

Regards,
Shiqing


On 2012-06-12 8:44 PM, vimalmat...@eaton.com wrote:

I ran OpenMPI_v1.6-1_win64.exe.
 Now I get this message:
C9995799@SOUMIWHP5003567 ~/openmpi-1.6
$ mpicc hello.c -o hello
WARNING: mpicc expected to find liblammpio.* in /usr/local/lib
WARNING: MPI-2 IO support will be disabled
gcc: hello.c: No such file or directory
mpicc: No such file or directory
--
Vimal


-Original Message-
From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of Jeff Squyres
Sent: Tuesday, June 12, 2012 2:30 PM
To: Open MPI Users
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)

Probably easier to just run the Open MPI binary installer.


On Jun 12, 2012, at 2:24 PM, <vimalmat...@eaton.com>  
<mailto:vimalmat...@eaton.com>  wrote:



So I simply download and run OpenMPI_v1.6-1_win64.exe?
Or is there a way to fix the Fortran compiler?
   --
Vimal
   -Original Message-
From: users-boun...@open-mpi.org  
[mailto:users-boun...@open-mpi.org]

On Behalf Of Jeff Squyres
Sent: Tuesday, June 12, 2012 2:20 PM
To: Open MPI Users
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not
found)
   It does not look like you successfully built Open MPI -- it looks  
like




Open MPI's configure script aborted because your Fortran compiler
wasn't
behaving:
   -
checking if Fortran 77 compiler supports COMPLEX*16... yes  
checking

size of Fortran 77 COMPLEX*16... 16 checking alignment of Fortran
COMPLEX*16... 8 checking if Fortran 77 compiler supports  
COMPLEX*32...

no checking for max Fortran MPI handle index... ( 0x7fff <
2147483647 ? 0x7fff : 2147483647 ) checking Fortran value for

.TRUE.

logical type... configure: error: Could not determine value of  
Fortran




.TRUE..  Aborting.
-
   Anything that happened after that is somewhat irrelevant because  
Open

MPI didn't configure properly.
   Looking in config.log, I see why:
   -
configure:44290: checking Fortran value for .TRUE. logical type
configure:44386: gcc -DNDEBUG -g -O2 -finline-functions
-fno-strict-aliasing -I. -c conftest.c
configure:44393: $? = 0
configure:44403: gfortran  -o conftest conftest.o conftestf.f
/usr/lib/gcc/i686-pc-cygwin/4.5.3/../../../../i686-pc-cygwin/bin/ld:
reopening conftest.exe: Device or resource busy
   /usr/lib/gcc/i686-pc-cygwin/4.5.3/../../../../i686-pc-cygwin/bin/ld:
final link failed: Device or resource busy
collect2: ld returned 1 exit status
configure:44410: $? = 1
configure:44427: error: Could not determine value of Fortran  
.TRUE..

Aborting.
-
   All this may be irrelevant, though, because it looks like you're
building on

Re: [OMPI users] Building MPI on Windows

[Shiqing Fan]

h of errors for the makefiles. I've
attached the .log and .out files.



Please tell me if I'm on the right track.



Thanks,

Vimal



From: Shiqing Fan [mailto:f...@hlrs.de]
Sent: Wednesday, June 13, 2012 9:37 AM
To: Mathew, Vimal
Cc: Open MPI Users
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)



Hi Vimal,

I'm not sure how you can uninstall  the other one, may be 'make
uninstall' from the source? Or you may also ask in their mailing list.

Another solution might use the full path for the executables, like
"c:\Program Files\OpenMPI_v1.6-win32\bin\mpicc hello.c" or under Cygwin:
"/cygdrive/c/Program\ Files/OpenMPI_v1.6-win32/bin/mpicc.exe hello.c".

Of course, I suggest to get rid of the other MPI implementation.

Shiqing


On 2012-06-13 3:17 PM, vimalmat...@eaton.com wrote:

Hi Shiqing,



I installed the LAN/MPI implementation first then the Open MPI
implementation.

Could this be the problem? If yes, how do I get rid of the LAN/MPI
implementation?



Thanks,

Vimal



From: Shiqing Fan [mailto:f...@hlrs.de]
Sent: Wednesday, June 13, 2012 4:49 AM
To: Open MPI Users
Cc: Mathew, Vimal
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)



Hi Vimal,

The output looks strange. If you use the installer under Cygwin, mpicc
shouldn't try to link with liblammpio.* or any library in
/usr/local/lib. So I guess the mpicc is messed up with some previously
installed MPI implementations. Could you please verify that 'which
mpicc' is the one you installed?

Anyway, here I sent some screen shots that how it should look like under
Cygwin.

1 - run command 'mpicc chello.c'

2 - run command 'mpicc chello.c -o chello'

Regards,
Shiqing


On 2012-06-12 8:44 PM, vimalmat...@eaton.com wrote:

I ran OpenMPI_v1.6-1_win64.exe.
 Now I get this message:
C9995799@SOUMIWHP5003567 ~/openmpi-1.6
$ mpicc hello.c -o hello
WARNING: mpicc expected to find liblammpio.* in /usr/local/lib
WARNING: MPI-2 IO support will be disabled
gcc: hello.c: No such file or directory
mpicc: No such file or directory
--
Vimal


-Original Message-
From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of Jeff Squyres
Sent: Tuesday, June 12, 2012 2:30 PM
To: Open MPI Users
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)

Probably easier to just run the Open MPI binary installer.


On Jun 12, 2012, at 2:24 PM, <vimalmat...@eaton.com>
<mailto:vimalmat...@eaton.com>  wrote:


So I simply download and run OpenMPI_v1.6-1_win64.exe?
Or is there a way to fix the Fortran compiler?
   --
Vimal
   -Original Message-
From: users-boun...@open-mpi.org
[mailto:users-boun...@open-mpi.org]
On Behalf Of Jeff Squyres
Sent: Tuesday, June 12, 2012 2:20 PM
To: Open MPI Users
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h
not
found)
   It does not look like you successfully built Open MPI -- it
looks like



Open MPI's configure script aborted because your Fortran
compiler
wasn't
behaving:
   -
checking if Fortran 77 compiler supports COMPLEX*16... yes
checking
size of Fortran 77 COMPLEX*16... 16 checking alignment of
Fortran
COMPLEX*16... 8 checking if Fortran 77 compiler supports
COMPLEX*32...
no checking for max Fortran MPI handle index... ( 0x7fff <
2147483647 ? 0x7fff : 2147483647 ) checking Fortran value
for

.TRUE.

logical type... configure: error: Could not determine value of
Fortran



.TRUE..  Aborting.
-
   Anything that happened after that is somewhat irrelevant because
Open
MPI didn't configure properly.
   Looking in config.log, I see why:
   -
configure:44290: checking Fortran value for .TRUE. logical type
configure:44386: gcc -DNDEBUG -g -O2 -finline-functions
-fno-strict-aliasing -I. -c conftest.c
configure:44393: $? = 0
configure:44403: gfortran  -o conftest conftest.o conftestf.f
/usr/lib/gcc/i686-pc-cygwin/4.5.3/../../../../i686-pc-cygwin/bin/ld:
reopening conftest.exe: Device or resource busy
/usr/lib/gcc/i686-pc-cygwin/4.5.3/../../../../i686-pc-cygwin/bin/ld:
final link failed: Device or resource busy
collect2: ld returned 1 exit status
configure:44410: $? = 1
configure:44427: error: Could not determine value of Fortran
.TRUE..
Aborting.
-
   All this may be irrelevant, though, because it looks like you're
building on Windows.
   In that case, you might well want to just download the OMPI
Windows
binaries.  I don't know offhand if we support building on
Windows with



the normal configure / make methodology; we normally use cmake
to
build from source on Windows.
   On Jun 12, 2012, at 1:2

Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)

[Shiqing Fan]

Hi Vimal,

I'm not sure how you can uninstall  the other one, may be 'make 
uninstall' from the source? Or you may also ask in their mailing list.


Another solution might use the full path for the executables, like 
"c:\Program Files\OpenMPI_v1.6-win32\bin\mpicc hello.c" or under Cygwin: 
"/cygdrive/c/Program\ Files/OpenMPI_v1.6-win32/bin/mpicc.exe hello.c".


Of course, I suggest to get rid of the other MPI implementation.

Shiqing


On 2012-06-13 3:17 PM, vimalmat...@eaton.com wrote:


Hi Shiqing,

I installed the LAN/MPI implementation first then the Open MPI 
implementation.


Could this be the problem? If yes, how do I get rid of the LAN/MPI 
implementation?


Thanks,

Vimal

*From:*Shiqing Fan [mailto:f...@hlrs.de]
*Sent:* Wednesday, June 13, 2012 4:49 AM
*To:* Open MPI Users
*Cc:* Mathew, Vimal
*Subject:* Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)

Hi Vimal,

The output looks strange. If you use the installer under Cygwin, mpicc 
shouldn't try to link with liblammpio.* or any library in 
/usr/local/lib. So I guess the mpicc is messed up with some previously 
installed MPI implementations. Could you please verify that 'which 
mpicc' is the one you installed?


Anyway, here I sent some screen shots that how it should look like 
under Cygwin.


1 - run command 'mpicc chello.c'

2 - run command 'mpicc chello.c -o chello'

Regards,
Shiqing



On 2012-06-12 8:44 PM, vimalmat...@eaton.com 
<mailto:vimalmat...@eaton.com> wrote:


I ran OpenMPI_v1.6-1_win64.exe.
  Now I get this message:
 C9995799@SOUMIWHP5003567 ~/openmpi-1.6
 $ mpicc hello.c -o hello
 WARNING: mpicc expected to find liblammpio.* in /usr/local/lib
 WARNING: MPI-2 IO support will be disabled
 gcc: hello.c: No such file or directory
 mpicc: No such file or directory
--
Vimal
  
  
-Original Message-

From:users-boun...@open-mpi.org  <mailto:users-boun...@open-mpi.org>  
[mailto:users-boun...@open-mpi.org] On
Behalf Of Jeff Squyres
Sent: Tuesday, June 12, 2012 2:30 PM
To: Open MPI Users
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)
  
Probably easier to just run the Open MPI binary installer.
  
  
On Jun 12, 2012, at 2:24 PM,<vimalmat...@eaton.com>  <mailto:vimalmat...@eaton.com>  wrote:
  


So I simply download and run OpenMPI_v1.6-1_win64.exe?

Or is there a way to fix the Fortran compiler?

  


--

Vimal

  

  


-Original Message-

From:users-boun...@open-mpi.org  <mailto:users-boun...@open-mpi.org>  
[mailto:users-boun...@open-mpi.org]

On Behalf Of Jeff Squyres

Sent: Tuesday, June 12, 2012 2:20 PM

To: Open MPI Users

Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not

found)

  


It does not look like you successfully built Open MPI -- it looks like

  


Open MPI's configure script aborted because your Fortran compiler

wasn't

behaving:

  


-

checking if Fortran 77 compiler supports COMPLEX*16... yes checking

size of Fortran 77 COMPLEX*16... 16 checking alignment of Fortran

COMPLEX*16... 8 checking if Fortran 77 compiler supports COMPLEX*32...

no checking for max Fortran MPI handle index... ( 0x7fff<

2147483647 ? 0x7fff : 2147483647 ) checking Fortran value for

.TRUE.

logical type... configure: error: Could not determine value of Fortran

  


.TRUE..  Aborting.

-

  


Anything that happened after that is somewhat irrelevant because Open

MPI didn't configure properly.

  


Looking in config.log, I see why:

  


-

configure:44290: checking Fortran value for .TRUE. logical type

configure:44386: gcc -DNDEBUG -g -O2 -finline-functions

-fno-strict-aliasing -I. -c conftest.c

configure:44393: $? = 0

configure:44403: gfortran  -o conftest conftest.o conftestf.f

/usr/lib/gcc/i686-pc-cygwin/4.5.3/../../../../i686-pc-cygwin/bin/ld:

reopening conftest.exe: Device or resource busy

  


/usr/lib/gcc/i686-pc-cygwin/4.5.3/../../../../i686-pc-cygwin/bin/ld:

final link failed: Device or resource busy

collect2: ld returned 1 exit status

configure:44410: $? = 1

configure:44427: error: Could not determine value of Fortran .TRUE..

Aborting.

-

  


All this may be irrelevant, though, because it looks like you're

building on Windows.

  


In that case, you might well want to just download the OMPI Windows

binaries.  I don't know offhand if we support building on Windows with

  


the normal configure / make methodology; we normally use cmake to

build from source on Windows.

  

  

  


On Jun 12, 2012, at 1:25 PM,<vimalmat...@eaton.com>  
<mailto:vimalmat...@eaton.com>  wrote:

  


Hi,

  


I was directed to the OpenMPI webs

Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)

[Shiqing Fan]

Hi Vimal,

The output looks strange. If you use the installer under Cygwin, mpicc 
shouldn't try to link with liblammpio.* or any library in 
/usr/local/lib. So I guess the mpicc is messed up with some previously 
installed MPI implementations. Could you please verify that 'which 
mpicc' is the one you installed?


Anyway, here I sent some screen shots that how it should look like under 
Cygwin.


1 - run command 'mpicc chello.c'

2 - run command 'mpicc chello.c -o chello'

Regards,
Shiqing



On 2012-06-12 8:44 PM, vimalmat...@eaton.com wrote:

I ran OpenMPI_v1.6-1_win64.exe.
  Now I get this message:
C9995799@SOUMIWHP5003567 ~/openmpi-1.6
$ mpicc hello.c -o hello
WARNING: mpicc expected to find liblammpio.* in /usr/local/lib
WARNING: MPI-2 IO support will be disabled
gcc: hello.c: No such file or directory
mpicc: No such file or directory
--
Vimal


-Original Message-
From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of Jeff Squyres
Sent: Tuesday, June 12, 2012 2:30 PM
To: Open MPI Users
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not found)

Probably easier to just run the Open MPI binary installer.


On Jun 12, 2012, at 2:24 PM,<vimalmat...@eaton.com>  wrote:


So I simply download and run OpenMPI_v1.6-1_win64.exe?
Or is there a way to fix the Fortran compiler?

--
Vimal


-Original Message-
From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org]
On Behalf Of Jeff Squyres
Sent: Tuesday, June 12, 2012 2:20 PM
To: Open MPI Users
Subject: Re: [OMPI users] Help with buidling MPI(Error: mpi.h not
found)

It does not look like you successfully built Open MPI -- it looks like
Open MPI's configure script aborted because your Fortran compiler
wasn't
behaving:

-
checking if Fortran 77 compiler supports COMPLEX*16... yes checking
size of Fortran 77 COMPLEX*16... 16 checking alignment of Fortran
COMPLEX*16... 8 checking if Fortran 77 compiler supports COMPLEX*32...
no checking for max Fortran MPI handle index... ( 0x7fff<
2147483647 ? 0x7fff : 2147483647 ) checking Fortran value for

.TRUE.

logical type... configure: error: Could not determine value of Fortran
.TRUE..  Aborting.
-

Anything that happened after that is somewhat irrelevant because Open
MPI didn't configure properly.

Looking in config.log, I see why:

-
configure:44290: checking Fortran value for .TRUE. logical type
configure:44386: gcc -DNDEBUG -g -O2 -finline-functions
-fno-strict-aliasing -I. -c conftest.c
configure:44393: $? = 0
configure:44403: gfortran  -o conftest conftest.o conftestf.f
/usr/lib/gcc/i686-pc-cygwin/4.5.3/../../../../i686-pc-cygwin/bin/ld:
reopening conftest.exe: Device or resource busy

/usr/lib/gcc/i686-pc-cygwin/4.5.3/../../../../i686-pc-cygwin/bin/ld:
final link failed: Device or resource busy
collect2: ld returned 1 exit status
configure:44410: $? = 1
configure:44427: error: Could not determine value of Fortran .TRUE..
Aborting.
-

All this may be irrelevant, though, because it looks like you're
building on Windows.

In that case, you might well want to just download the OMPI Windows
binaries.  I don't know offhand if we support building on Windows with
the normal configure / make methodology; we normally use cmake to
build from source on Windows.



On Jun 12, 2012, at 1:25 PM,<vimalmat...@eaton.com>  wrote:


Hi,

I was directed to the OpenMPI website from the Boost Libraries page
to

install an MPI Installation.

I've followed all the steps in the installation guide to configure
and

build MPI. When I try to compile the hello.c program which contains
.

I get an error message saying mpi.h does not exist I've attached the
config.log, config.out, make.out , ompi_info all and make-install.out

files.

Any help will be greatly appreciated!

Thanks,
Vimal Mathew

___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users


--
Jeff Squyres
jsquy...@cisco.com
For corporate legal information go to:
http://www.cisco.com/web/about/doing_business/legal/cri/


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users

___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users


--
Jeff Squyres
jsquy...@cisco.com
For corporate legal information go to:
http://www.cisco.com/web/about/doing_business/legal/cri/


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users

___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users






--
-----------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(

Re: [OMPI users] scope of MPI_publish/Lookup_name of openmpi on windows 7

[Shiqing Fan]

Hi Toufik,

I'm not 100% sure about this. Could you provide a small example that I 
can test on? Thanks.


Regards,
Shiqing

On 2012-04-17 4:43 PM, toufik hadjazi wrote:

Hi,

does openmpi (installed on windows 7) support name publication throw 
different jobs? if yes, how to make two different jobs communicate 
using the name of the server ?


best regards,
Toufik.


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] configuration of openmpi-1.5.4 with visual studio

[Shiqing Fan]

Hi Toufik,

That might explain something. Open MPI detects that you have CCP 
installed on your system, which actually doesn't work. Could you please 
check if CCP has been removed completely? Run "set" command to make sure 
there is no CCP_* env variable any more. That should solve the problem.


Regards,
Shiqing


On 2012-04-16 3:07 PM, toufik hadjazi wrote:

Hi Jayesh,

I am working on a 32-bit windows 7 and yes, I had a HPC pack installed 
but i removed it before installing openMPI.


best regards,
Toufik.


Date: Mon, 16 Apr 2012 10:47:43 +0200
From: f...@hlrs.de
To: us...@open-mpi.org
CC: h_touf...@hotmail.fr
Subject: Re: [OMPI users] configuration of openmpi-1.5.4 with visual 
studio



Hi Toufik,

Do you have a HPC pack or CCP installed on your windows 7? It seems 
that Open MPI is trying to use ccp to allocate resources. Is your 
windows 7 64 bit or 32 bit?



Regards,
Shiqing

On 2012-04-10 7:43 PM, toufik hadjazi wrote:

Hi,

even when i try to run : ompi_clean.exe or any other commande in
the commande line with a supervisor account it fails and gives me
the same error message.

best regards,
Toufik


From: h_touf...@hotmail.fr <mailto:h_touf...@hotmail.fr>
To: f...@hlrs.de <mailto:f...@hlrs.de>; us...@open-mpi.org
<mailto:us...@open-mpi.org>
Date: Tue, 10 Apr 2012 17:34:23 +
Subject: Re: [OMPI users] configuration of openmpi-1.5.4 with
visual studio

Hi,

still not working for me :(
(PS: it compiles well without any error but it fails in the
execution).
the error message is :


[Toufik-PC:05628] [[21037,0],0] ORTE_ERROR_LOG: Error in file
..\..\..\openmpi-1.5.4\orte\mca\ess\hnp\ess_hnp_module.c at line 215

--
It looks like orte_init failed for some reason; your parallel
process is
likely to abort. There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
Open MPI developer):

  orte_rml_base_select failed
  --> Returned value Error (-1) instead of ORTE_SUCCESS


best regards,
Toufik

> Date: Mon, 9 Apr 2012 22:13:20 +0200
> From: f...@hlrs.de <mailto:f...@hlrs.de>
> To: us...@open-mpi.org <mailto:us...@open-mpi.org>
> CC: greg.bl...@morgansolar.com <mailto:greg.bl...@morgansolar.com>
> Subject: Re: [OMPI users] configuration of openmpi-1.5.4 with
visual studio
>
> Hi Greg,
>
> Glad to hear that it works for you.
>
> And yes, these definitions are necessary for compiling any MPI
> application on Windows.
>
>
> Regards,
> Shiqing
>
> On 2012-04-09 6:12 PM, Greg Blair wrote:
> > After we had OpenMPI 1.54 working, we moved to OpenMPI 1.55
without incident.
> >
> > However, neither 1.54 nor 1.55 would link any reference to
comm_world
> > generated
> > from C or C++ until we defined the following three compiler
defines
> > 1. OMPI_IMPORTS
> > 2. OPAL_IMPORTS
> > 3. ORTE_IMPORTS
> >
> > (drill down the MSVC IDE menu system: View Solution Explorer,
> > Solution explorer, properties, C/C++, Preprocessor, Preprocessor
> > Definitions and set OMPI_IMPORTS OPAL_IMPORTS and ORTE_IMPORTS)
> >
> > On 4/9/12, Greg Blair<greg.bl...@morgansolar.com>
<mailto:greg.bl...@morgansolar.com> wrote:
> >> After we had OpenMPI 1.54 working, we moved to OpenMPI 1.55
without
> >> incident.
> >>
> >> However, neither 1.54 nor 1.55 would link any reference to
comm_world
> >> from C or C++ until we defined the following three compile
defines
> >>
> >
>
>
> --
> -----------
> Shiqing Fan
> High Performance Computing Center Stuttgart (HLRS)
> Tel: ++49(0)711-685-87234 Nobelstrasse 19
> Fax: ++49(0)711-685-65832 70569 Stuttgart
> http://www.hlrs.de/organization/people/shiqing-fan/
> email: f...@hlrs.de <mailto:f...@hlrs.de>
>
> ___
> users mailing list
> us...@open-mpi.org <mailto:us...@open-mpi.org>
> http://www.open-mpi.org/mailman/listinfo.cgi/users

Re: [OMPI users] configuration of openmpi-1.5.4 with visual studio

[Shiqing Fan]

Hi Jeff,

They are definitions for enabling dllexport/import declarations on Windows, and 
they existed since the initial version for Cygwin. Normally these definitions 
are hidden via mpicc command wrapper, but on Windows, when user tries to 
compile a project in Visual Studio, they have to be added manually.

I think there might be some workaround to get rid of them. Need some time to 
test.

Regards,
Shiqing



On 2012-04-16 3:48 PM, Jeffrey Squyres wrote:

Shiqing --

What are these defines?  Shouldn't they be invisible when compiling MPI 
applications?



On Apr 9, 2012, at 4:13 PM, Shiqing Fan wrote:


Hi Greg,

Glad to hear that it works for you.

And yes, these definitions are necessary for compiling any MPI application on 
Windows.


Regards,
Shiqing

On 2012-04-09 6:12 PM, Greg Blair wrote:

After we had OpenMPI 1.54 working, we moved to OpenMPI 1.55 without incident.

However, neither 1.54 nor 1.55  would link any reference to comm_world
generated
from C or C++ until we defined the following three compiler defines
1. OMPI_IMPORTS
2. OPAL_IMPORTS
3. ORTE_IMPORTS

(drill down the MSVC IDE  menu system: View Solution Explorer,
Solution explorer,  properties, C/C++, Preprocessor, Preprocessor
Definitions and set OMPI_IMPORTS OPAL_IMPORTS and ORTE_IMPORTS)

On 4/9/12, Greg Blair<greg.bl...@morgansolar.com>   wrote:

After we had OpenMPI 1.54 working, we moved to OpenMPI 1.55 without
incident.

However, neither 1.54 nor 1.55  would link any reference to comm_world
from C or C++ until we defined the following three compile defines



--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users





--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] configuration of openmpi-1.5.4 with visual studio

[Shiqing Fan]

Hi Toufik,

Do you have a HPC pack or CCP installed on your windows 7? It seems that 
Open MPI is trying to use ccp to allocate resources. Is your windows 7 
64 bit or 32 bit?



Regards,
Shiqing

On 2012-04-10 7:43 PM, toufik hadjazi wrote:

Hi,

even when i try to run : ompi_clean.exe or any other commande in the 
commande line with a supervisor account it fails and gives me the same 
error message.


best regards,
Toufik


From: h_touf...@hotmail.fr
To: f...@hlrs.de; us...@open-mpi.org
Date: Tue, 10 Apr 2012 17:34:23 +
Subject: Re: [OMPI users] configuration of openmpi-1.5.4 with visual 
studio


Hi,

still not working for me :(
(PS: it compiles well without any error but it fails in the execution).
the error message is :


[Toufik-PC:05628] [[21037,0],0] ORTE_ERROR_LOG: Error in file
..\..\..\openmpi-1.5.4\orte\mca\ess\hnp\ess_hnp_module.c at line 215

--
It looks like orte_init failed for some reason; your parallel process is
likely to abort. There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems. This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
Open MPI developer):

  orte_rml_base_select failed
  --> Returned value Error (-1) instead of ORTE_SUCCESS


best regards,
Toufik

> Date: Mon, 9 Apr 2012 22:13:20 +0200
> From: f...@hlrs.de
> To: us...@open-mpi.org
> CC: greg.bl...@morgansolar.com
> Subject: Re: [OMPI users] configuration of openmpi-1.5.4 with visual 
studio

>
> Hi Greg,
>
> Glad to hear that it works for you.
>
> And yes, these definitions are necessary for compiling any MPI
> application on Windows.
>
>
> Regards,
> Shiqing
>
> On 2012-04-09 6:12 PM, Greg Blair wrote:
> > After we had OpenMPI 1.54 working, we moved to OpenMPI 1.55 
without incident.

> >
> > However, neither 1.54 nor 1.55 would link any reference to comm_world
> > generated
> > from C or C++ until we defined the following three compiler defines
> > 1. OMPI_IMPORTS
> > 2. OPAL_IMPORTS
> > 3. ORTE_IMPORTS
> >
> > (drill down the MSVC IDE menu system: View Solution Explorer,
> > Solution explorer, properties, C/C++, Preprocessor, Preprocessor
> > Definitions and set OMPI_IMPORTS OPAL_IMPORTS and ORTE_IMPORTS)
> >
> > On 4/9/12, Greg Blair<greg.bl...@morgansolar.com> wrote:
> >> After we had OpenMPI 1.54 working, we moved to OpenMPI 1.55 without
> >> incident.
> >>
> >> However, neither 1.54 nor 1.55 would link any reference to comm_world
> >> from C or C++ until we defined the following three compile defines
> >>
> >
>
>
> --
> -----------
> Shiqing Fan
> High Performance Computing Center Stuttgart (HLRS)
> Tel: ++49(0)711-685-87234 Nobelstrasse 19
> Fax: ++49(0)711-685-65832 70569 Stuttgart
> http://www.hlrs.de/organization/people/shiqing-fan/
> email: f...@hlrs.de
>
> ___
> users mailing list
> us...@open-mpi.org
> http://www.open-mpi.org/mailman/listinfo.cgi/users

___ users mailing list 
us...@open-mpi.org http://www.open-mpi.org/mailman/listinfo.cgi/users



___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
-------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] OpenMpi on a windows Xp tcp network

[Shiqing Fan]

Hi Bradi,

Yes, as you are on an XP machine, the io forwarding is not working for 
Open MPI. So you won't see the remote output from the local command 
windows. The only way is to direct the output into a file, for example: 
mpirun -n 2 app.exe > output.txt . This will generate the output file on 
remote computer under the same path where you run on local computer.


Regards,
Shiqing

On 2012-04-15 10:11 AM, Bradi Rares wrote:

Hello,

I have 2 windows Xp computers connected through an ethernet network. I 
have installed openMPI using the windows installer 
OpenMPI_v1.5.4-1_win32.exe 
<http://www.open-mpi.org/software/ompi/v1.5/downloads/OpenMPI_v1.5.4-1_win32.exe> 
on every computer. I have set the LD_LIBRARY_PATH variable to 
"C:\Program Files\OpenMPI_v1.5.4-win32\lib" (this is the directory 
where the installation extracted my files)
and the PATH "C:\Program Files\OpenMPI_v1.5.4-win32\bin". I have 
configured the 2 computers so that I can launch processes remotely. 
The command used to launch the process is

*mpirun -H Cooler.lan,mugiwara-4adeb0 -n 2 MPI1.exe
*where the program simply outputs the rank and the processor name.
My problem is that the output is not collected to the stdout of the 
rank 0 process. On the remote machine I simply see that the process is 
launched and when execution finishes is destroyed. I want to find a 
solution to this , because I have no ideea what could be causing this. 
Please if you could suggest a solution to my problem I would be very 
thankful.
The process can be launched locally with success. ethNode1.txt 
contains the ipconfig /all on node 1, ompi_infoNode1.txt contains the 
result of command *ompi_info -v ompi full --parsable *and 
ompi_info.txt the result of ompi_info -all command.


Thank-you in advance.
*
** **
** WARNING:  This email contains an attachment of a very suspicious type.  **
** You are urged NOT to open this attachment unless you are absolutely **
** sure it is legitimate.  Opening this attachment may cause irreparable   **
** damage to your computer and your files.  If you have any questions  **
** about the validity of this message, PLEASE SEEK HELP BEFORE OPENING IT. **
** **
** This warning was added by the IU Computer Science Dept. mail scanner.   **
*



___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
-----------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] Myid changes to 0 after using a mpi_recv

[Shiqing Fan]

1, MPI_COMM_WORLD, ierr )
>  print 10, flag2, myid
>10format('Master says, Flag2: ',i0.1, ' MyID: ', i0.1)
>  enddo
> c --
> c Slave portion
> c --
>   elseif (myid.ne.0) then
> c to see ID before mpi_rcv
>  print *, 'Slave: ', myid
>  call mpi_recv( flag, 1, MPI_INTEGER, 0,
>  +   1, MPI_COMM_WORLD, status, ierr )
> c check myid after recv which turns to 0 on my environment
>  print 9, flag, myid
>9 format('Slave says, Flag: ',i0.1, ' MyID: ', i0.1)
>  call mpi_recv( flag2, 1, MPI_INTEGER, 0,
>  +   1, MPI_COMM_WORLD, status, ierr )
>  print 11, flag2, myid
>11format('Slave says, Flag2: ',i0.1, ' MyID: ', i0.1)
>   endif
>
>   call mpi_finalize(rc)
>   stop
>   end
> c --
>
> Simple makefile for my environment:
> #
> # MPI makefile
> #
> #INSTALL_DIR = ./
> F77= x86_64-w64-mingw32-gfortran
> # Progra~2 because it is located in Program Files (x86)
> LIB= -L/cygdrive/c/Progra~2/OpenMPI_v1.5.5-x64/bin
> INCLUDE= -I/cygdrive/c/Progra~2/OpenMPI_v1.5.5-x64/include
> FFLAGS=
> MAKE= make
> SHELL= /bin/sh
> #
> ### End User configurable options ###
>
> SRC1= mpihello
> OBJS= $(SRC1).o
>
> pikaia : $(OBJS)
> $(F77) $(FFLAGS) -o mpihello $(OBJS) $(LIB) -lmpi_f77
> #rm -f *.o
>
> $(SRC1).o : $(SRC1).f
> $(F77) $(FFLAGS) $(INCLUDE) -c $(SRC1).f
>
> So I am wondering if this is something that is an issue with the
current build of openMPI , if I am missing something or if it's my
convoluted environment. Attached is the source and makefile of
what is above and then my built .exe and a libgcc_s_sjlj-1.dll to
run the .exe.
>
> Thank you for the help
>
> --
> AMorgan
>
>
>

> ___
> users mailing list
> us...@open-mpi.org <mailto:us...@open-mpi.org>
> http://www.open-mpi.org/mailman/listinfo.cgi/users


--
Jeff Squyres
jsquy...@cisco.com <mailto:jsquy...@cisco.com>
For corporate legal information go to:
http://www.cisco.com/web/about/doing_business/legal/cri/


___
    users mailing list
us...@open-mpi.org <mailto:us...@open-mpi.org>
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
*AMorgan*



_______
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] configuration of openmpi-1.5.4 with visual studio

[Shiqing Fan]

Hi Greg,

Glad to hear that it works for you.

And yes, these definitions are necessary for compiling any MPI 
application on Windows.



Regards,
Shiqing

On 2012-04-09 6:12 PM, Greg Blair wrote:

After we had OpenMPI 1.54 working, we moved to OpenMPI 1.55 without incident.

However, neither 1.54 nor 1.55  would link any reference to comm_world
generated
from C or C++ until we defined the following three compiler defines
1. OMPI_IMPORTS
2. OPAL_IMPORTS
3. ORTE_IMPORTS

(drill down the MSVC IDE  menu system: View Solution Explorer,
Solution explorer,  properties, C/C++, Preprocessor, Preprocessor
Definitions and set OMPI_IMPORTS OPAL_IMPORTS and ORTE_IMPORTS)

On 4/9/12, Greg Blair<greg.bl...@morgansolar.com>  wrote:

After we had OpenMPI 1.54 working, we moved to OpenMPI 1.55 without
incident.

However, neither 1.54 nor 1.55  would link any reference to comm_world
from C or C++ until we defined the following three compile defines






--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] configuration of openmpi-1.5.4 with visual studio

[Shiqing Fan]

Hi Toufik,

Could you please try the 1.5.5 installer?
http://www.open-mpi.org/software/ompi/v1.5/downloads/OpenMPI_v1.5.5-1_win32.exe

Please let me know if it works for you. Thanks.

Shiqing

On 2012-04-02 8:02 PM, toufik hadjazi wrote:

Hi Shiqing,

i haven't yet find a solution and for the record, i have installed 
openmpi from an executable on windows 7(i don't know if i mentioned 
that before). at first, i had an error message while compiling the 
hello world application : unresolved link or something like that, then 
i added "OMPI_IMPORTS" to the configuration of visual studio it's here 
when i got the error message described before.

and for the output of ompi_info it's attached to this email.
best regards.
Toufik


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
-------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] configuration of openmpi-1.5.4 with visual studio

[Shiqing Fan]

Hi Toufik

Sorry for answering late. Have you found a solution for this problem?

Could you please provide me some information of your CMake configuration and an 
output of ompi_info? This might be helpful for me to know what is wrong.


Regards,
Shiqing

On 2012-03-19 11:57 AM, Toufik wrote:

Hi everybody,

I'm trying lately to configure openmpi with visual studio 2010,
i did all the linking staff but i keep getting this message :

[Toufik-PC:05628] [[21037,0],0] ORTE_ERROR_LOG: Error in file
..\..\..\openmpi-1.5.4\orte\mca\ess\hnp\ess_hnp_module.c at line 215

--
It looks like orte_init failed for some reason; your parallel process is
likely to abort.  There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems.  This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
Open MPI developer):

   orte_rml_base_select failed
   -->  Returned value Error (-1) instead of ORTE_SUCCESS

could anybody tell me what the problem could be 'cause i don't really
know what to do.

Thanks&  regards,
Toufik

___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] OpenMPI at windows

[Shiqing Fan]

Hi Tal,

The released Windows binaries are built only for Microsoft VS compilers.

If you want to use gcc and g++, you have to build Open MPI by yourself 
using CMake.  Just select "MSYS Makefiles" as the generator, you can 
build binaries under MinGW. Please note that, this is only supported for 
32bit MinGW, and there may be run-time problems, as it is still 
experimental.



Regards,
Shiqing

On 2012-02-26 7:33 AM, Tal Regev wrote:

Hi all,
I am using windows 7 64 bit,
and i want to compile with mpicc and mpic++.
i download OpenMPI_v1.5.4-1_win32.exe 
<http://www.open-mpi.org/software/ompi/v1.5/downloads/OpenMPI_v1.5.4-1_win32.exe>

and when i compile with it, it say i need lc.exe.
there is a way to config mpicc and mpic++ to use customize compiler?
I want that mpicc.exe will use mingw gcc -> gcc.exe
and mpic++ will use mingw g++ -> g++.exe.
can you help me what I need to do?

thx Tal.


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
-----------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] O-MPI Support for Windows 7

[Shiqing Fan]

I'm afraid "--mca plm rsh" is not going to work. James is using a 
Windows build, which doesn't have the rsh plm module.


There are only two plm modules for windows:
MCA plm: process (MCA ...
MCA plm: ccp (MCA ...

I think the binaries built by James contains only the process module, 
which is internaly using WMI. So there is no way to switch to ssh or 
rsh, because they are not built.


To use ssh, one has to build Open MPI source under Cygwin, using the 
auto-tools chain (the same as on Linux). Unfortunately, the CMake 
support in OMPI was only for the native windows build, it won't work 
under Cygwin.


On 2012-02-07 1:51 PM, George Bosilca wrote:

Let's try to force the usage of ssh.

First try:

mpirun --mca plm rsh hostname

If not, go in the installation directory and rename 
lib/openmpi/mca_plm_rsh.* to something without the .la and .so 
extension. Then re-run the hostname via mpirun.


  george.

On Feb 7, 2012, at 06:32 , James Torossian wrote:


Hi Shiqing,
I agree. I think that I am somehow using WMI, but this is happening 
both with the Open-MPI windows binary (OpenMPI_v1.5.4-1_win32.exe) 
and also with versions of the binaries I built (1.4.3 & 1.5.1 from svn).
What do I have to do to get OpenMPI to use ssh instead of WMI. From 
what I can see of the configuration with ompi_info, the following 
seems correct:

$ ompi_info -all
Package: Open MPI hpcfan@VISCLUSTER26 Distribution
Open MPI: 1.5.4
Open MPI SVN revision: r25060
Open MPI release date: Aug 18, 2011
Open RTE: 1.5.4
Open RTE SVN revision: r25060
Open RTE release date: Aug 18, 2011
OPAL: 1.5.4
OPAL SVN revision: r25060
OPAL release date: Aug 18, 2011
Ident string: 1.5.4
….
MCA orte: parameter "orte_rsh_agent" (current value: , ….
….
MCA plm: parameter "plm_rsh_agent" (current value: , ….
….
Is there a cmake configuration option I need to set for a Windows 
build to use ssh? Is there some environment or package configuration 
option I need to set?

Thanks again for your help, I am keen to know what I am missing.
Best regards,
Jim
*From:*Shiqing Fan [mailto:f...@hlrs.de]
*Sent:*Tuesday, February 07, 2012 8:20 PM
*To:*Open MPI Users; james.toross...@essetek.com 
<mailto:james.toross...@essetek.com>

*Cc:*Ralph Castain
*Subject:*Re: [OMPI users] O-MPI Support for Windows 7
Hi James,

One other possibility could be that ssh is actually not used at all. 
Did you build Open MPI under Cygwin? Is the ssh module shown up in 
the ompi_info output?


The user credential message looks very familiar to me as it seems 
from the WMI (Windows Management Instrumentation) module, where the 
'save credential' option has not been implemented.


Shiqing

On 2012-02-07 4:11 AM, Ralph Castain wrote:
Afraid I'm no OpenSSH expert, but it sounds like there is an issue 
with its configuration. Check out the OpenSSH config options to see 
if something fits.

I did a quick search and found this, as an example:
http://mah.everybody.org/docs/ssh
Note the need to run ssh-agent to cache login credentials.
On Feb 6, 2012, at 5:05 PM, James Torossian wrote:


Hi all,
I am trying to setup Open-MPI across two Windows 7 machines with UAC 
disabled ……
Cygwin with OpenSSH is installed, and I can successfully ssh to each 
machine without entry of username and password:

JimT@JimT-PC ~
$ ssh NanoOneQuad
Last login: Tue Feb  7 01:42:02 2012 from jimt-pc
JimT@NanoOneQuad ~
$
Regardless of this, mpirun insists on asking for a username and 
password; then asks to save credentials, but if selected, responds 
with not implemented. If saving credentials is not selected, then I 
can see that the task starts on the other machine (in task manager) 
and that the task runs to completion OK:

JimT@JimT-PC ~
$ mpirun -H NanoOneQuad ipconfig.exe
connecting to NanoOneQuad
username:JimT
password:**
Save Credential?(Y/N) y
[JimT-PC:03784] This feature hasn't been implemented yet.
JimT@JimT-PC ~
$ mpirun -H NanoOneQuad ipconfig.exe
connecting to NanoOneQuad
username:JimT
password:**
Save Credential?(Y/N) n
JimT@JimT-PC ~
$
Please let me know what I have missed. I have gone through the FAQs 
and have rebuilt the windows version but can’t seem to get past this.

Thanks and best regards,
Jim
___
users mailing list
us...@open-mpi.org <mailto:us...@open-mpi.org>
http://www.open-mpi.org/mailman/listinfo.cgi/users



___
users mailing list
us...@open-mpi.org  <mailto:us...@open-mpi.org>
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
-------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email:f...@hlrs.de  <mailto:f...@hlrs.de>
___
users mailing list
us...@open-m

Re: [OMPI users] O-MPI Support for Windows 7

[Shiqing Fan]

Hi James,

One other possibility could be that ssh is actually not used at all. Did 
you build Open MPI under Cygwin? Is the ssh module shown up in the 
ompi_info output?


The user credential message looks very familiar to me as it seems from 
the WMI (Windows Management Instrumentation) module, where the 'save 
credential' option has not been implemented.


Shiqing

On 2012-02-07 4:11 AM, Ralph Castain wrote:
Afraid I'm no OpenSSH expert, but it sounds like there is an issue 
with its configuration. Check out the OpenSSH config options to see if 
something fits.


I did a quick search and found this, as an example:

http://mah.everybody.org/docs/ssh

Note the need to run ssh-agent to cache login credentials.

On Feb 6, 2012, at 5:05 PM, James Torossian wrote:


Hi all,
I am trying to setup Open-MPI across two Windows 7 machines with UAC 
disabled ..
Cygwin with OpenSSH is installed, and I can successfully ssh to each 
machine without entry of username and password:

JimT@JimT-PC ~
$ ssh NanoOneQuad
Last login: Tue Feb  7 01:42:02 2012 from jimt-pc
JimT@NanoOneQuad ~
$
Regardless of this, mpirun insists on asking for a username and 
password; then asks to save credentials, but if selected, responds 
with not implemented. If saving credentials is not selected, then I 
can see that the task starts on the other machine (in task manager) 
and that the task runs to completion OK:

JimT@JimT-PC ~
$ mpirun -H NanoOneQuad ipconfig.exe
connecting to NanoOneQuad
username:JimT
password:**
Save Credential?(Y/N) y
[JimT-PC:03784] This feature hasn't been implemented yet.
JimT@JimT-PC ~
$ mpirun -H NanoOneQuad ipconfig.exe
connecting to NanoOneQuad
username:JimT
password:**
Save Credential?(Y/N) n
JimT@JimT-PC ~
$
Please let me know what I have missed. I have gone through the FAQs 
and have rebuilt the windows version but can't seem to get past this.

Thanks and best regards,
Jim
___
users mailing list
us...@open-mpi.org <mailto:us...@open-mpi.org>
http://www.open-mpi.org/mailman/listinfo.cgi/users




___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] Openmpi in Mingw

[Shiqing Fan]

Hi,

Are you using 32 bit Windows or 64 bit? Because as far as I know, the 
build for 64 bit windows with MinGW is not working. Which CMake 
Generator did you use? Did you run CMake from the MSYS command window?


Thanks,
Shiqing

On 2012-01-24 9:24 PM, Temesghen Kahsai wrote:

Hello,

I am having truble compiling openmpi (version 1.5.5rc2r25765 - nightly 
built) on Mingw. I am running Windows 7 and the latest version of Mingw.

I keep on getting the following error:

In file included from ../../opal/include/opal_config_bottom.h:258:0,
 from ../../opal/include/opal_config.h:2327,
 from asm.c:19:
../../opal/win32/win_compat.h:93:14: error: conflicting types for 
'ssize_t'
c:\mingw\bin\../lib/gcc/mingw32/4.6.2/../../../../include/sys/types.h:118:18: 
note: previous declaration of 'ssize_t' wa

s here
In file included from ../../opal/include/opal_config_bottom.h:258:0,
 from ../../opal/include/opal_config.h:2327,
 from asm.c:19:
../../opal/win32/win_compat.h:321:0: warning: "OPAL_HAVE_HWLOC" 
redefined [enabled by default]
../../opal/include/opal_config.h:1876:0: note: this is the location of 
the previous definition

In file included from ../../opal/include/opal_config.h:2327:0,
 from asm.c:19:
../../opal/include/opal_config_bottom.h:559:0: warning: "PF_UNSPEC" 
redefined [enabled by default]
c:\mingw\bin\../lib/gcc/mingw32/4.6.2/../../../../include/winsock2.h:368:0: 
note: this is the location of the previous definition
../../opal/include/opal_config_bottom.h:562:0: warning: "AF_INET6" 
redefined [enabled by default]
c:\mingw\bin\../lib/gcc/mingw32/4.6.2/../../../../include/winsock2.h:329:0: 
note: this is the location of the previous definition
../../opal/include/opal_config_bottom.h:565:0: warning: "PF_INET6" 
redefined [enabled by default]
c:\mingw\bin\../lib/gcc/mingw32/4.6.2/../../../../include/winsock2.h:392:0: 
note: this is the location of the previous definition



Thank you.

T
___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
-------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] How to configure Intel Visual Fortran to work with OpenMPI

[Shiqing Fan]

Hi,

I made a binary package based on the current 1.5 rc2. Please find it in 
the download link here: http://db.tt/AXJF40ph. It should work on your 
win XP. Thanks a lot for testing it.



Regards,
Shiqing



On 2012-01-19 8:36 AM, Robert garcia wrote:

Thanks for clarification,

For now I 'll stick with current version of Win32 XP , if it's not a 
heavy workload, could you build a binary package ?


Regards,



Date: Wed, 18 Jan 2012 23:38:06 +0100
From: f...@hlrs.de
To: us...@open-mpi.org
CC: robertgarcia2...@hotmail.com
Subject: Re: [OMPI users] How to configure Intel Visual Fortran to 
work with OpenMPI


Hi Robert,

This is a known issue. The released binary was built on Windows Server 
2008,  which has newer Windows system dependencies. We have fixed this 
problem and it is included for the next release. If you don't want to 
switch to another Windows version, I can build one working binary 
package and pass it to you off-list, meanwhile, you can also wait for 
the upcoming release.



Best Regards,
Shiqing


On 2012-01-18 6:21 PM, Robert garcia wrote:

hi all,

I'm experiencing a difficulty when I'm trying to run the fortran
code which which uses parallel processing. I started with
downloading the /"OpenMPI_v1.5.4-1_win32.exe/

<http://www.open-mpi.org/software/ompi/v1.5/downloads/OpenMPI_v1.5.4-1_win32.exe>"
 I've
configured everything in IVF to point out to the correct static
libs and search paths, also set the enviromental variables Path to
directory where OpenMPI dll's(e.g. libmpi.dll, libmpid.dll
etc..) reside. Program compiles and links properly till the
message pops out like "The procedure entry point
InterlockedCompareExchange64 could not be located in the dynamic
link library KERNEL32.dll"
What can be the problem ?
Regards,



___
users mailing list
us...@open-mpi.org  <mailto:us...@open-mpi.org>
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
-------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email:f...@hlrs.de  <mailto:f...@hlrs.de>



--
-----------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] How to configure Intel Visual Fortran to work with OpenMPI

[Shiqing Fan]

Hi Robert,

This is a known issue. The released binary was built on Windows Server 
2008,  which has newer Windows system dependencies. We have fixed this 
problem and it is included for the next release. If you don't want to 
switch to another Windows version, I can build one working binary 
package and pass it to you off-list, meanwhile, you can also wait for 
the upcoming release.



Best Regards,
Shiqing


On 2012-01-18 6:21 PM, Robert garcia wrote:

hi all,

I'm experiencing a difficulty when I'm trying to run the fortran code 
which which uses parallel processing. I started with downloading the 
/"OpenMPI_v1.5.4-1_win32.exe/ 
<http://www.open-mpi.org/software/ompi/v1.5/downloads/OpenMPI_v1.5.4-1_win32.exe>" I've 
configured everything in IVF to point out to the correct static libs 
and search paths, also set the enviromental variables Path to 
directory where OpenMPI dll's(e.g. libmpi.dll, libmpid.dll 
etc..) reside. Program compiles and links properly till the message 
pops out like "The procedure entry point InterlockedCompareExchange64 
could not be located in the dynamic link library KERNEL32.dll"

What can be the problem ?
Regards,



___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
-----------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] feature requests: mpic++ to report both release and debug flags

[Shiqing Fan]

Hi MM,

Actually option 3 has already been implemented for Windows build, and it 
seems adequate. But it was not targeting for the windows binary, as only 
quite a few users require this feature.


When enabling WANT_EXE_DEBUG_POSTFIX option in CMake GUI, the build 
system will generate mpic++.exe (release) and mpic++d.exe (debug), and 
also their wrapper data files. So it is possible so just use mpic++ 
-showsome for release options and mpic++d -showsome for debug options.


Is this what you are looking for? If it is really necessary, I don't see 
any problem to include it in the windows binary releases.


I don't know how this is done on Linux system, can anyone comment?


Regards,
Shiqing


On 2012-01-16 3:51 PM, MM wrote:


Hello,

It would be useful for the end user to use mpic++ to obtain the 
compile and link flags for both release and debug builds.


There is a number of possible solutions:

1.add the showme flags of mpic++ and any other similar binary to 
something like -showme:compile_debug -showme:compile_release 
-showme:link_release -showme:link_debug


2.add a -showme_debug flag to tune the -showme:compile -showme:link

3.have 2 versions of the binary mpic++(release) and mpic++(debug)

4.have 1 version of the mpic++ but 2 versions of the of 
wrapper-data.txt file


5.have 1 version of mpic++ and 1 version of the wrapper-data file, and 
2 sections in the wrapper-data file


It would be great to have this delivered in the win binaries package 
(include both release and debug libs, that's already the case), and 
advise 3rd party packagers on unix/linux/mac distributions to do 
similarily


It would be also useful to publish the cmake flags used by default to 
produce the win binaries


I am available to test the packages if possible, also is there a wiki 
for requests or a similar system where I should file the above.


MM

Regards,

*From:*Shiqing Fan [mailto:f...@hlrs.de]
*Sent:* 19 November 2011 04:44
*To:* Open MPI Users
*Cc:* MM
*Subject:* Re: [OMPI users] mpic++-wrapper-data.txt msvc10 
Release/Debug 1.5.4


Hi,

There is no easy solution. But you can try to use 
WANT_EXE_DEBUG_POSTFIX option in CMake GUI. Enabling this option will 
generate different executable.library names for debug and release 
build. For example, mpic++d.exe for debug and mpic++.exe for release.


For you case, just build both debug and release version of Open MPI 
1.5.4, and install them into the same path, you will get two sets of 
executables/libraries (with "d" postfix for debug version) and mpic++ 
config files (mpic++d-wrapper-data.txt for debug version). Then just 
append your own debug/release compile options in the config files, and 
build with boost mpi as you need.


Hope this helps.

Regards,
Shiqing

On 2011-11-18 9:44 PM, MM wrote:

Hello,

Compiling boost mpi library uses mpic++ to get the compile flags to 
pass to cl.exe and link libs to pass to the linker.


In my case:

>>> mpic++ -showme:compile

/I"C:\Program Files\openmpi\bin/../include" /TP /EHsc */MD*

>>> mpic++ -showme:link

/link /LIBPATH:"C:\Program Files\openmpi\bin/../lib" *libmpi_cxx.lib 
libmpi.lib libopen-pal.lib libopen-rte.lib advapi32.lib Ws2_32.lib 
shlwapi.lib*


To choose Release build or Debug build, is it possible to use 
mpic++-wrapper-data.txt to specify both options?


Release

*/MD*

*libmpi_cxx.lib libmpi.lib libopen-pal.lib libopen-rte.lib 
advapi32.lib Ws2_32.lib shlwapi.lib*


**

Debug

*/MDd*

*libmpi_cxxd.lib libmpid.lib libopen-pald.lib libopen-rted.lib 
advapi32.lib Ws2_32.lib shlwapi.lib*


is there a debug version of "*advapi32.lib Ws2_32.lib shlwapi.lib"*

**

For now, I will just override that file for Release, build boost mpi, 
override for Debug, build for Debug.


thanks,

MM




___
users mailing list
us...@open-mpi.org  <mailto:us...@open-mpi.org>
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
-------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email:f...@hlrs.de  <mailto:f...@hlrs.de>



--
-------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] Problem launching application on windows

[Shiqing Fan]

Hi Alex,

Have you solved the problem?

Another user also spotted the same problem but under Cygwin. Did you 
also see the problem under Cygwin, or in normal Windows command prompt? 
Actually, there shouldn't be anything wrong with sockets in Open MPI to 
cause such errors anymore, but they of course won't work correctly under 
Cygwin in some cases.



Regards,
Shiqing

On 2011-10-28 1:33 PM, Alex van 't Veer wrote:


Hi Shiqing,

Unfortunately that did not solve the problem.

Can you tell me something more about how the sockets work and how they 
could get corrupted? Maybe I can figure out what is going wrong.


Thanks



*From:*Shiqing Fan [mailto:f...@hlrs.de]
*Sent:* Friday, October 28, 2011 12:16 PM
*To:* Open MPI Users
*Cc:* Alex van 't Veer
*Subject:* Re: [OMPI users] Problem launching application on windows

Hi,

This looks not normal, because this error might happen mainly by 
improper sockets. I don't have any clue at moment, as I can't 
reproduce it.


Could you try to reinstall Open MPI? And make sure there is no other 
installation on your system. If this is still not working, try using 
Open MPI 1.5.3. Please let me know whether these will work for you or not.


Regards,
Shiqing

On 2011-10-27 11:35 AM, Alex van 't Veer wrote:

Hi

I've installed the OpenMPI 1.5.4-1 64-bit binaries on windows 7 when I 
run mpirun.exe without any options I get the help text and everything 
seems to work fine but when I try to actually run a application, I get 
the following error:


..\..\..\openmpi-1.5.4\opal\event\event.c: ompi_evesel->dispatch() failed.

I get the error when running any application, to exclude my own 
application I tried the hello world example and it returns the same 
error. (The command I used is mpirun.exe helloworld.exe)


Searching for the error in the list or looking at event.c didn't get 
me much further, can anyone point me in the right direction for 
solving this problem?


Thanks




___
users mailing list
us...@open-mpi.org  <mailto:us...@open-mpi.org>
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
-------
Shiqing Fan
High Performance Computing CenterStuttgart  (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email:f...@hlrs.de  <mailto:f...@hlrs.de>
  
  
  



___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
-----------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] OBJ_CLASS_INSTANCE error: initializer element is not constant - Windows 7 64 bit mingw-w64 4.6.3

[Shiqing Fan]

Hi Roger,

Have you tested also with 32 bit build?


I was able to build the open-rte and the rest by applying g++.exe 
instead of gcc.exe.  I couldn't find any combination of --std=C9x to 
make the c compiling happy for gcc.exe.


Actually, the C9x option is not really necessary here, but "-x c" should 
do the work.  It is defined in the CMake variable OMPI_C_LAN_FLAG, is it 
also empty in your CMakeCache file?




For open-rte build I ran into issues with opal_ifisloopback impl 
unreferenced.  I'll regenerate my steps and post more discrete pieces.


It would be great if you can provide your CMake Config settings and 
log/cache file. Thanks a lot.


Regards,
Shiqing





Regards,
Roger


On 12/28/2011 06:15 PM, Shiqing Fan wrote:

Hi Roger,

To be honest, this MinGW support for Open MPI was integrated when the 
64 bit MinGW wasn't available, so I haven't tested it for the 64 bit 
build. I'll give a try, and come back to you soon.


Thanks for your report.

Regards,
Shiqing

On 2011-12-22 4:54 PM, Roger Martin wrote:

Hi,

Working on building on windows with MinGW.  Have built libopen-pal, 
opal-restart, opal-wrapper and am at the open-rte stage of the build.
The  OBJ_CLASS_INSTANCE hits errors about 'initializer element is 
not constant'. Open-pal also uses OBJ_CLASS_INSTANCE and doesn't 
throw this error.
Tried g++ instead of gcc and source such as rmcast_base_open.c 
compiled successfully but then I get into name mangling issues.


Being not familiar with the code I haven't yet determined why 
open-pal is successful and open-rte isn't.  Flag difference?  Is 
there code difference between them in how they apply the 
OBJ_CLASS_INSTANCE?


$ ../../mingw64/bin/gcc.exe --version
gcc.exe (GCC) 4.6.3 2005 (prerelease)

..line 325 of 
rmcast_base_open.c.

 OBJ_CLASS_INSTANCE(rmcast_base_send_t,
   opal_list_item_t,
   send_construct,
   send_destruct);


C:\Software\openmpi-build>gmake
[ 14%] Built target libopen-pal
[ 14%] Built target opal-restart
[ 14%] Built target opal-wrapper
[ 14%] Building C object 
orte/CMakeFiles/libopen-rte.dir/mca/rmcast/base/rmcast_

base_open.obj
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:325:1: 
erro

r: initializer element is not constant
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:325:1: 
erro

r: (near initialization for 'rmcast_base_send_t_class.cls_parent')
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:363:1: 
erro

r: initializer element is not constant
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:363:1: 
erro

r: (near initialization for 'rmcast_base_recv_t_class.cls_parent')
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:403:1: 
erro

r: initializer element is not constant
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:403:1: 
erro

r: (near initialization for 'rmcast_base_channel_t_class.cls_parent')
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:413:1: 
erro

r: initializer element is not constant
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:413:1: 
erro

r: (near initialization for 'rmcast_seq_tracker_t_class.cls_parent')
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:434:1: 
erro

r: initializer element is not constant
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:434:1: 
erro

r: (near initialization for 'rmcast_recv_log_t_class.cls_parent')
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:451:1: 
erro

r: initializer element is not constant
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:451:1: 
erro

r: (near initialization for 'rmcast_send_log_t_class.cls_parent')
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:466:1: 
erro

r: initializer element is not constant
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:466:1: 
erro

r: (near initialization for 'orte_rmcast_msg_t_class.cls_parent')
gmake[2]: *** 
[orte/CMakeFiles/libopen-rte.dir/mca/rmcast/base/rmcast_base_open.

obj] Error 1
gmake[1]: *** [orte/CMakeFiles/libopen-rte.dir/all] Error 2
gmake: *** [all] Error 2

___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users






___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
-----------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] OBJ_CLASS_INSTANCE error: initializer element is not constant - Windows 7 64 bit mingw-w64 4.6.3

[Shiqing Fan]

Hi Roger,

To be honest, this MinGW support for Open MPI was integrated when the 64 
bit MinGW wasn't available, so I haven't tested it for the 64 bit build. 
I'll give a try, and come back to you soon.


Thanks for your report.

Regards,
Shiqing

On 2011-12-22 4:54 PM, Roger Martin wrote:

Hi,

Working on building on windows with MinGW.  Have built libopen-pal, 
opal-restart, opal-wrapper and am at the open-rte stage of the build.
The  OBJ_CLASS_INSTANCE hits errors about 'initializer element is not 
constant'. Open-pal also uses OBJ_CLASS_INSTANCE and doesn't throw 
this error.
Tried g++ instead of gcc and source such as rmcast_base_open.c 
compiled successfully but then I get into name mangling issues.


Being not familiar with the code I haven't yet determined why open-pal 
is successful and open-rte isn't.  Flag difference?  Is there code 
difference between them in how they apply the OBJ_CLASS_INSTANCE?


$ ../../mingw64/bin/gcc.exe --version
gcc.exe (GCC) 4.6.3 2005 (prerelease)

..line 325 of 
rmcast_base_open.c.

 OBJ_CLASS_INSTANCE(rmcast_base_send_t,
   opal_list_item_t,
   send_construct,
   send_destruct);


C:\Software\openmpi-build>gmake
[ 14%] Built target libopen-pal
[ 14%] Built target opal-restart
[ 14%] Built target opal-wrapper
[ 14%] Building C object 
orte/CMakeFiles/libopen-rte.dir/mca/rmcast/base/rmcast_

base_open.obj
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:325:1: 
erro

r: initializer element is not constant
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:325:1: 
erro

r: (near initialization for 'rmcast_base_send_t_class.cls_parent')
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:363:1: 
erro

r: initializer element is not constant
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:363:1: 
erro

r: (near initialization for 'rmcast_base_recv_t_class.cls_parent')
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:403:1: 
erro

r: initializer element is not constant
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:403:1: 
erro

r: (near initialization for 'rmcast_base_channel_t_class.cls_parent')
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:413:1: 
erro

r: initializer element is not constant
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:413:1: 
erro

r: (near initialization for 'rmcast_seq_tracker_t_class.cls_parent')
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:434:1: 
erro

r: initializer element is not constant
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:434:1: 
erro

r: (near initialization for 'rmcast_recv_log_t_class.cls_parent')
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:451:1: 
erro

r: initializer element is not constant
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:451:1: 
erro

r: (near initialization for 'rmcast_send_log_t_class.cls_parent')
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:466:1: 
erro

r: initializer element is not constant
C:\Software\openmpi-1.5.5rc1\orte\mca\rmcast\base\rmcast_base_open.c:466:1: 
erro

r: (near initialization for 'orte_rmcast_msg_t_class.cls_parent')
gmake[2]: *** 
[orte/CMakeFiles/libopen-rte.dir/mca/rmcast/base/rmcast_base_open.

obj] Error 1
gmake[1]: *** [orte/CMakeFiles/libopen-rte.dir/all] Error 2
gmake: *** [all] Error 2

___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] Open MPI 1.5.4 on windows g95 / mpif90 support

[Shiqing Fan]

Hi,

The Fortran 90 bindings on Windows is still not available yet.

Regards,
Shiqing


On 2011-12-14 12:56 PM, Joao Amaral wrote:

Hi all,

I am trying to have a working mpif90 on my laptop PC (windows 7 64 
bits), so that I can develop/test fortran 90 MPI code before running 
it on a cluster.


I have tried the 1.5.4 installer on windows, cygwin, installed ubuntu, 
tried cygwin again, and now am back to the Open MPI 1.5.4 windows build.


Is it possible to use my existing g95 installation on windows so that 
I can compile fortran 90 mpi code?


These are the top lines from the output of the "ompi_info" command.

 Package: Open MPI hpcfan@VISCLUSTER26 Distribution
Open MPI: 1.5.4
   Open MPI SVN revision: r25060
   Open MPI release date: Aug 18, 2011
Open RTE: 1.5.4
   Open RTE SVN revision: r25060
   Open RTE release date: Aug 18, 2011
OPAL: 1.5.4
   OPAL SVN revision: r25060
   OPAL release date: Aug 18, 2011
Ident string: 1.5.4
  Prefix: C:\Program Files (x86)\OpenMPI_v1.5.4-x64
 Configured architecture: x86 Windows-6.1
  Configure host: VISCLUSTER26
   Configured by: hpcfan
   Configured on: 10:44 AM 08/19/2011
  Configure host: VISCLUSTER26
Built by: hpcfan
Built on: 10:44 AM 08/19/2011
  Built host: VISCLUSTER26
  C bindings: yes
C++ bindings: yes
  Fortran77 bindings: yes (caps)
  Fortran90 bindings: no
 Fortran90 bindings size: na
  C compiler: cl
 C compiler absolute: D:/MSDev10/VC/bin/amd64/cl.exe
  C compiler family name: MICROSOFT
  C compiler version: 1600
C++ compiler: cl
   C++ compiler absolute: D:/MSDev10/VC/bin/amd64/cl.exe
  Fortran77 compiler: ifort
  Fortran77 compiler abs: C:/Program Files
  (x86)/Intel/ComposerXE-2011/bin/amd64/ifort.exe
  Fortran90 compiler: none
  Fortran90 compiler abs: none
 C profiling: yes
   C++ profiling: yes
 Fortran77 profiling: yes
 Fortran90 profiling: no
  C++ exceptions: no
  Thread support: no
   Sparse Groups: no
  Internal debug support: no
  MPI interface warnings: no
 MPI parameter check: never

(...)

Thanks for your help.


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
-------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] orte_debugger_select and orte_ess_set_name failed

[Shiqing Fan]

Hi MM,

That doesn't really help.

Do you need a debug version on your 32 bit Windows XP? Maybe I can build 
one for you. Will send it to you off the mailing list.


Regards,
Shiqing

On 2011-11-29 2:59 PM, MM wrote:

debugging mpirund arrives to
openmpi-1.5.4\opal\mca\base\mca_base_components_select.c:
function mca_base_select

components_available list appears to be empty, ie
orte_debugger_base_components_available appears to be empty (opal list
length=0)

Is this an indication of something meaningful?

Note, I built opnempi static libs (with dll c/c++ runtime)
OMPI_IMPORTS is __not__ defined, that's how I got it to compile

MM
-Original Message-
From: Shiqing Fan [mailto:f...@hlrs.de]
Sent: 25 November 2011 22:19
To: MM
Subject: Re: [OMPI users] orte_debugger_select and orte_ess_set_name failed

Hi MM,

Do you really want to build Open MPI by yourself? If you only need the
libraries, probably you may stick to 1.5.4 binaries, which you said
works for you.

Anyway, if you want to debug mpirun, you can step into orterun project,
which generates mpirun executable.

Which version of Open MPI are you building? I'm not sure whether I'll
have time this days to look closely to this problem, but if you can
reproduce this problem with a small test program, and send it to me, I
would like also help debug it.


Best Regards,
Shiqing


On 2011-11-25 11:06 PM, MM wrote:

Shiqing,

As I built the mpi libs in debug as well, can I break point somehow when I
run

mpirun -np 1   : -np 1

and I get those 2 errors.

Can I breakpoint somehow inside vs2010? maybe to investigate what's going
on?

How do I launch "mpirun" in debug from the openmpi solution. Which project
generates the mpirun binary?

I am a bit stuck and would appreciate help to progress,

rds,

MM

-Original Message-----
From: Shiqing Fan [mailto:f...@hlrs.de]
Sent: 24 November 2011 16:44
To: MM
Cc: 'Open MPI Users'
Subject: Re: [OMPI users] orte_debugger_select and orte_ess_set_name

failed

Hi MM,

Sorry for the delayed reply, I was busy in a meeting these days.

The log files seem not very helpful to solve the problem. May be your
CMakeCache.txt file would help.

Currently we don't provided binaries built from trunk. Have you also
tried the 1.5.x binaries?

Best Regards,
Shiqing

On 2011-11-23 10:08 PM, MM wrote:

Hi Shiqing,

Is the info provided useful to understand what's going on?
Alternatively, is there a way to get the provided binaries for win but

off

trunk rather than off 1.5.4 as on the website, because I don't have this
problem when I link against those libs,

Thanks

MM

-Original Message-
From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of MM
Sent: 21 November 2011 21:08
To: f...@hlrs.de
Cc: 'Open MPI Users'
Subject: Re: [OMPI users] orte_debugger_select and orte_ess_set_name

failed

Hi,

I have placed the source in \Program Files\openmpi-1.5.4 the build dir in
\Program Files\openmpi.build and the install dir in \Program

Files\openmpi

I could not find config.log in any of the 3 directories nor in the

directory

from which I run mpirun.

The build log attached is a zip of all the .log under \Program
Files\openmpi.build

First, I installed the provided binaries on xp32bit, and successfully ran
the program in Release mode.
in debug mode, there was that error of some function missing in kernel,

that

you fixed in svn.

Second, I then downloaded the source and built the static libraries w

cmake

according to README.windows, and against these home built libs, the same
program run neithers in debug nor in release, because of the error below.

How can I generate the config.log?

About Debug/Release, thinking about it at this time, I don't really need

the

debug libs of openmpi.
but to be able to link against vs2010 Release libs of openmpi, I need

them

to be linked against the Release c runtime, so I might as well link

against

the debug version of the openmpi libs.

Your help is very appreciated,
MM

-Original Message-----
From: Shiqing Fan [mailto:f...@hlrs.de]
Sent: 21 November 2011 12:48
To: Open MPI Users
Cc: MM
Subject: Re: [OMPI users] orte_debugger_select and orte_ess_set_name

failed

Hi,

Could you please send your config and build log to me? Have you tried

with

a

simpler program? Does this error always happen?

Regards,
Shiqing


On 2011-11-19 4:24 PM, MM wrote:

Trying to run my program linked against debug 1.5.4 on vs2010 fails:


mpirun -np 1 .\nhui\Debug\nhui.exe : -np 1
.\nhcomp\Debug\nhcomp.exe

[PCNAME:04960] [[1282,0],0] ORTE_ERROR_LOG: Not found in file
C:\Program Files\openmpi-1.5.4\orte\mca\ess\hnp\ess_hnp_module.c at
line 536
--
 It looks like orte_init failed for some reason; your parallel
process is likely to abort.  There are many reasons that a parallel
process can fail during orte_init; some of which are due to
configuration or environment problems.  This failu

Re: [OMPI users] orte_debugger_select and orte_ess_set_name failed

[Shiqing Fan]

Hi MM,

Sorry for the delayed reply, I was busy in a meeting these days.

The log files seem not very helpful to solve the problem. May be your 
CMakeCache.txt file would help.


Currently we don't provided binaries built from trunk. Have you also 
tried the 1.5.x binaries?


Best Regards,
Shiqing

On 2011-11-23 10:08 PM, MM wrote:

Hi Shiqing,

Is the info provided useful to understand what's going on?
Alternatively, is there a way to get the provided binaries for win but off
trunk rather than off 1.5.4 as on the website, because I don't have this
problem when I link against those libs,

Thanks

MM

-Original Message-
From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On
Behalf Of MM
Sent: 21 November 2011 21:08
To: f...@hlrs.de
Cc: 'Open MPI Users'
Subject: Re: [OMPI users] orte_debugger_select and orte_ess_set_name failed

Hi,

I have placed the source in \Program Files\openmpi-1.5.4 the build dir in
\Program Files\openmpi.build and the install dir in \Program Files\openmpi

I could not find config.log in any of the 3 directories nor in the directory
from which I run mpirun.

The build log attached is a zip of all the .log under \Program
Files\openmpi.build

First, I installed the provided binaries on xp32bit, and successfully ran
the program in Release mode.
in debug mode, there was that error of some function missing in kernel, that
you fixed in svn.

Second, I then downloaded the source and built the static libraries w cmake
according to README.windows, and against these home built libs, the same
program run neithers in debug nor in release, because of the error below.

How can I generate the config.log?

About Debug/Release, thinking about it at this time, I don't really need the
debug libs of openmpi.
but to be able to link against vs2010 Release libs of openmpi, I need them
to be linked against the Release c runtime, so I might as well link against
the debug version of the openmpi libs.

Your help is very appreciated,
MM

-Original Message-
From: Shiqing Fan [mailto:f...@hlrs.de]
Sent: 21 November 2011 12:48
To: Open MPI Users
Cc: MM
Subject: Re: [OMPI users] orte_debugger_select and orte_ess_set_name failed

Hi,

Could you please send your config and build log to me? Have you tried with a
simpler program? Does this error always happen?

Regards,
Shiqing


On 2011-11-19 4:24 PM, MM wrote:

Trying to run my program linked against debug 1.5.4 on vs2010 fails:


mpirun -np 1 .\nhui\Debug\nhui.exe : -np 1
.\nhcomp\Debug\nhcomp.exe

[PCNAME:04960] [[1282,0],0] ORTE_ERROR_LOG: Not found in file
C:\Program Files\openmpi-1.5.4\orte\mca\ess\hnp\ess_hnp_module.c at
line 536
--
 It looks like orte_init failed for some reason; your parallel
process is likely to abort.  There are many reasons that a parallel
process can fail during orte_init; some of which are due to
configuration or environment problems.  This failure appears to be an
internal failure; here's some additional information (which may only
be relevant to an Open MPI developer):

orte_debugger_select failed
-->   Returned value Not found (-13) instead of ORTE_SUCCESS
--
 [PCNAME:04960] [[1282,0],0] ORTE_ERROR_LOG: Not found in file
C:\Program Files\openmpi-1.5.4\orte\runtime\orte_init.c at line 128
--
 It looks like orte_init failed for some reason; your parallel
process is likely to abort.  There are many reasons that a parallel
process can fail during orte_init; some of which are due to
configuration or environment problems.  This failure appears to be an
internal failure; here's some additional information (which may only
be relevant to an Open MPI developer):

orte_ess_set_name failed
-->   Returned value Not found (-13) instead of ORTE_SUCCESS
--
 [LLDNRATDHY9H4J:04960] [[1282,0],0] ORTE_ERROR_LOG: Not found in
file C:\Program Files\openmpi-1.5.4\orte\tools\orterun\orterun.c at
line 616

any help is appreciated,
MM

___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de



*
**
**
** WARNING:  This email contains an attachment of a very suspicious type.
**
** You are urged NOT to open this attachment unless you are absolutely
**
** sure it is legitimate.  Opening this attachment may cause irreparable
**
** damage to your computer and your files.  If yo

Re: [OMPI users] orte_debugger_select and orte_ess_set_name failed

[Shiqing Fan]

Hi,

Could you please send your config and build log to me? Have you tried 
with a simpler program? Does this error always happen?


Regards,
Shiqing


On 2011-11-19 4:24 PM, MM wrote:

Trying to run my program linked against debug 1.5.4 on vs2010 fails:


mpirun -np 1 .\nhui\Debug\nhui.exe : -np 1 .\nhcomp\Debug\nhcomp.exe

[PCNAME:04960] [[1282,0],0] ORTE_ERROR_LOG: Not found in file C:\Program
Files\openmpi-1.5.4\orte\mca\ess\hnp\ess_hnp_module.c at line 536
--
It looks like orte_init failed for some reason; your parallel process is
likely to abort.  There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems.  This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
Open MPI developer):

   orte_debugger_select failed
   -->  Returned value Not found (-13) instead of ORTE_SUCCESS
--
[PCNAME:04960] [[1282,0],0] ORTE_ERROR_LOG: Not found in file C:\Program
Files\openmpi-1.5.4\orte\runtime\orte_init.c at line 128
--
It looks like orte_init failed for some reason; your parallel process is
likely to abort.  There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems.  This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
Open MPI developer):

   orte_ess_set_name failed
   -->  Returned value Not found (-13) instead of ORTE_SUCCESS
--
[LLDNRATDHY9H4J:04960] [[1282,0],0] ORTE_ERROR_LOG: Not found in file
C:\Program Files\openmpi-1.5.4\orte\tools\orterun\orterun.c at line 616

any help is appreciated,
MM

___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] openmpi and mingw32?

[Shiqing Fan]

Hi John,

Yes, there will be an initial build support for MinGW, but a few runtime 
issues still need to be fixed.


If you want to try the current one, please download one of the latest 
1.5 nightly tarballs. Please just let me know if you got problems on 
that. Feedback would be helpful and appreciated.



Regards,
Shiqing


On 2011-11-20 10:13 PM, John R. Cary wrote:

Are there plans for mingw32 support in openmpi?

If so, any time scale?

I configured with cmake and errored out at

In file included from 
C:/winsame/builds-mingw/facetsall-mingw/openmpi-1.5.4/opal/include/opal_config_bottom.h:258:0,
 from 
C:/winsame/builds-mingw/facetsall-mingw/openmpi-1.5.4/try/opal/include/opal_config.h:1423,
 from 
C:\winsame\builds-mingw\facetsall-mingw\openmpi-1.5.4\try\opal\datatype\opal_datatype_pack_checksum.c:21:
C:/winsame/builds-mingw/facetsall-mingw/openmpi-1.5.4/opal/win32/win_compat.h:104:14: 
error: conflicting types for 'ssize_t'


Thx...John
___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] vs2010: MPI_Address() unresolved

[Shiqing Fan]

Does this happen also for other MPI_* functions? Probably you need to 
add OMPI_IMPORTS as an extra preprocessor.


Regards,
Shiqing

On 2011-11-19 1:02 AM, MM wrote:


Hi,

I get this style of errors when trying to link against libmpid.lib 
 (compiled with instructions from README.Windows part 1 cmake):


mylib.lib(myfile.obj): : error LNK2001: unresolved external symbol 
__imp__MPI_Address


I set BUILD_SHARED_LIBS to false, so I generate static libs. I've also 
checked that the /MDd is set and indeed libmpid.lib are built against 
the DLL version of the C++ runtime when I open the solution in vs2010.


I myself link my application against the /MDd as well.

I don't know why it's looking for __impl__MPI_Address  (__impl__ is a 
prefix related to DLLs somehow).


I gather this MPI_Address() function resides in libmpi.lib and libmpid.lib

PS: I didn't have these link errors when I built against the prebuilt 
win libraries from the website, what are the CMAke flags for those?


Thanks,

MM



___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] mpic++-wrapper-data.txt msvc10 Release/Debug 1.5.4

[Shiqing Fan]

Hi,

There is no easy solution. But you can try to use WANT_EXE_DEBUG_POSTFIX 
option in CMake GUI. Enabling this option will generate different 
executable.library names for debug and release build. For example, 
mpic++d.exe for debug and mpic++.exe for release.


For you case, just build both debug and release version of Open MPI 
1.5.4, and install them into the same path, you will get two sets of 
executables/libraries (with "d" postfix for debug version) and mpic++ 
config files (mpic++d-wrapper-data.txt for debug version). Then just 
append your own debug/release compile options in the config files, and 
build with boost mpi as you need.


Hope this helps.

Regards,
Shiqing

On 2011-11-18 9:44 PM, MM wrote:


Hello,

Compiling boost mpi library uses mpic++ to get the compile flags to 
pass to cl.exe and link libs to pass to the linker.


In my case:

>>> mpic++ -showme:compile

/I"C:\Program Files\openmpi\bin/../include" /TP /EHsc */MD*

>>> mpic++ -showme:link

/link /LIBPATH:"C:\Program Files\openmpi\bin/../lib" *libmpi_cxx.lib 
libmpi.lib libopen-pal.lib libopen-rte.lib advapi32.lib Ws2_32.lib 
shlwapi.lib*


To choose Release build or Debug build, is it possible to use 
mpic++-wrapper-data.txt to specify both options?


Release

*/MD*

*libmpi_cxx.lib libmpi.lib libopen-pal.lib libopen-rte.lib 
advapi32.lib Ws2_32.lib shlwapi.lib*


**

Debug

*/MDd*

*libmpi_cxxd.lib libmpid.lib libopen-pald.lib libopen-rted.lib 
advapi32.lib Ws2_32.lib shlwapi.lib*


is there a debug version of "*advapi32.lib Ws2_32.lib shlwapi.lib"*

**

For now, I will just override that file for Release, build boost mpi, 
override for Debug, build for Debug.


thanks,

MM



___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
-----------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832      70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] Is it not possible to run a program with MPI code without mpirun/mpiexec?

[Shiqing Fan]

I just found out that there were missing updates for Windows in 
singleton module (in trunk but not in 1.5 branch). I'll make a CMR for this.


On 2011-11-14 1:45 PM, Ralph Castain wrote:

Hmmm...it -should- work, but I've never tried it on Windows. I will verify it 
under Linux, but will have to defer to Shiqing to see if there is something 
particular about the Windows environment.


On Nov 13, 2011, at 8:13 PM, Naor Movshovitz wrote:


I have open-mpi v1.5.4, installed from the binary installer for
Windows. The following program test.c

#include
#include
int main(int argc, char *argv[])
{
  int rank, size;
  MPI_Init(,);
  MPI_Comm_size(MPI_COMM_WORLD,);
  MPI_Comm_rank(MPI_COMM_WORLD,);
  printf("hellow world from rank %d of %d.\n",rank,size);
  MPI_Finalize();
  return 0;
}

is compiled and linked without issue with

c:\temp\mpicc test.c

It also runs without issue with

c:\temp\mpirun test.exe

and prints the expected output. However, running the executable directly, as in

c:\temp\test

prints the following and then hangs:

[COMPUTERNAME:03060] [[34061,0],0] ORTE_ERROR_LOG: Value out of
bounds in file ../../../openmpi-1.5.4\orte\mca\oob\tcp\oob_tcp.c at
line 1193

Is this a bug? I normally expect mpi programs to run without problem
as a standalone executable. I should add that the mpi installation
does not have any directories/files named in the error log, only
pre-built binaries.

Thanks muchly,
-nuun
___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users





--
-------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] Problem launching application on windows

[Shiqing Fan]

Hi,

This looks not normal, because this error might happen mainly by 
improper sockets. I don't have any clue at moment, as I can't reproduce it.


Could you try to reinstall Open MPI? And make sure there is no other 
installation on your system. If this is still not working, try using 
Open MPI 1.5.3. Please let me know whether these will work for you or not.


Regards,
Shiqing

On 2011-10-27 11:35 AM, Alex van 't Veer wrote:


Hi

I've installed the OpenMPI 1.5.4-1 64-bit binaries on windows 7 when I 
run mpirun.exe without any options I get the help text and everything 
seems to work fine but when I try to actually run a application, I get 
the following error:


..\..\..\openmpi-1.5.4\opal\event\event.c: ompi_evesel->dispatch() failed.

I get the error when running any application, to exclude my own 
application I tried the hello world example and it returns the same 
error. (The command I used is mpirun.exe helloworld.exe)


Searching for the error in the list or looking at event.c didn't get 
me much further, can anyone point me in the right direction for 
solving this problem?


Thanks



___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] successful story of building openmpi on cygwin?

[Shiqing Fan]

Hi Yue,

If you want to build Open MPI on Windows, there is another way by using 
CMake and Visual Studio, take a look into the windows readme file in the 
source root.


If you want to use the GNU compilers, you might also use CMake with 
MinGW. But the MinGW support is only basically supported.



Regards,
Shiqing

On 2011-10-27 6:14 AM, Yue Guan wrote:

Hi, there

Any successful story of building openmpi on cygwin? I run the default
building process and stuck at /opal/mca/maffinity for gcc: vfork:
Resource temporarily unavailable.

Best

--Yue
___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] revisiting topic: prebuilt on windows7 not xp

[Shiqing Fan]

Hi,

On 2011-10-16 10:25 PM, MM wrote:


in http://www.open-mpi.org/community/lists/users/2011/07/16854.php, 
Shiqing says it is impossible to use the prebuilt binaries with 
Windows xp, however I manage to use them in Release mode  with vc2010, 
but not in debug mode.


Can this be some indication that there is a tweak to have both the 
release and debug version of the libs when built on windows 7 work 
also for xp?




Yes, this will be definitely available for the next 1.5 release.

I would definitely rather use prebuilt openmpi libs as it's easier to 
change versions,


thanks,

MM



___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] Building with thread support on Windows?

[Shiqing Fan]

Hi Bjorn,

Unfortunately, the currently version of Open MPI for Windows doesn't 
support Posix nor Solaris threads.


However, the work of supporting MinGW is proceeding, which will support 
GNU compilers for building Open MPI on Windows, and it may partly 
support pthread, but still needs a lot of tests.



Regards,
Shiqing



On 2011-09-21 8:33 PM, Björn Regnström wrote:
I am building with VS 2008 and the compiler (cl) and the standard 
libraries that goes with
it, including the windows thread library. I have noted that ompi_info 
requires either Posix
or Solaris threads to report that open-mpi has thread support. Do I 
 need to change the

thread library and/or do I need another compiler?

Regards,
Bjorn Regnstrom

At Wednesday, 2011-09-21 on 17:32 Tim Prince wrote:

On 9/21/2011 11:18 AM, Björn Regnström wrote:
> Hi,
>
> I am trying to build Open MPI 1.4.3 with thread support on
Windows. A
> trivial test program
> runs if it calls MPI_Init or MP_Init_thread(int *argc, char
***argv, int
> required, int *provide) with
> reguired=0 but hangs if required>0. ompi_info for my build
reports that
> there is no thread
> support but MPI_Init_thread returns provide==required.
>
> The only change in the CMake configuration was to check
> OMPI_ENABLE_MPI_THREADS.
> Is there anything else that needs to be done with the configuration?
>
> I have built 1.4.3 with thread support on several linuxes and
mac and it
> works fine there.
>
Not all Windows compilers work well enough with all threading models
that you could expect satisfactory results; in particular, the
compilers
and thread libraries you use on linux may not be adequate for Windows
thread support.


-- 
Tim Prince

___
users mailing list
us...@open-mpi.org <mailto:us...@open-mpi.org>
http://www.open-mpi.org/mailman/listinfo.cgi/users



___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
-------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] Mingw - Gfortran - Cmake : 'gettimeofday'

[Shiqing Fan]

Hi Fabien,

I've done some tests these days. 

g95 works with Open MPI 1.4.3, you need to start the cmake-gui from a 
Visual Studio command prompt in order to grand all correct environment 
settings, then after the first time configuration, set 
CMAKE_Fortran_COMPILER to the path of g95.exe, and enable 
OMPI_F77_BINDINGS option. The F90 bindings are not supported yet.


Regards,
Shiqing
On Friday, September 02, 2011 12:30:31 AM, Fabien wrote:

Hi,

Thanks for your answers.

- I encountered some errors with MinGW makefiles on "trunk".

- So, I dived into VS_Express_2010 makefiles and only specified
Mingw/gfortran as compiler. (I'm not sure : should I choose
CMAKE_Fortran_COMPILER:FILEPATH=C:/MinGW/bin/gfortran.exe or
mingw32-gfortran.exe?)

+ But, configuring with F77+F90 bindings leads to this error :

CMake Error at contrib/platform/win32/CMakeModules/f77_get_sizeof.cmake:86
(MESSAGE):
   Could not determine size of CHARACTER.
Call Stack (most recent call first):
   contrib/platform/win32/CMakeModules/f77_check.cmake:60
(OMPI_F77_GET_SIZEOF)
   contrib/platform/win32/CMakeModules/ompi_configure.cmake:637
(OMPI_F77_CHECK)
   CMakeLists.txt:99 (BEGIN_CONFIGURE)

+ When disabling F77 bindings and only keeping F90 bindings, I was
able to configure/build/install but no "mpif90" are installed in
OUTPUT_PATH.
Only C-like. I suppose that F77 is then mandatory but what about this
error...?

Should I give a try with G95 instead?

Thanks for your attention&  Best regards,

Fabien Decung


-Message d'origine-
De : Jeff Squyres [mailto:jsquy...@cisco.com]
Envoyé : mercredi 31 août 2011 14:30
À : f...@hlrs.de; Open MPI Users
Cc : Fabien
Objet : Re: [OMPI users] Mingw - Gfortran - Cmake : 'gettimeofday'

Shiqing --

Do you want to add this kind of info to the FAQ?  I seem to recall that the
gettimeofday question has come up before...?


On Aug 31, 2011, at 8:27 AM, Shiqing Fan wrote:


Hi Fabien,

The GCC build under MinGW is not supported in Open MPI 1.4.3. The initial

support is now in trunk, but needs more test.


Actually, you may also try building 1.4.3 with Visual Studio Express with

Fortran bindings for gfortran. Just configure the solution for Visual
Studio, and specify the fortran compiler full path and name in variable
CMAKE_Fortran_COMPILER.


Please try it out. It worked for me before.


Regards,
Shiqing

On 2011-08-30 11:45 PM, Fabien wrote:

Hello,

I’m trying to compile Open-MPI 1.4.3 using {MinGW;CMake} on a

Vista-32-Bits. I’m interested in running in parallel a fortran program
(compiled with C:\MINGW\bin\gfortran.exe )

I’m aware that a binary package has been released but – unfortunately –

it has been configured with the Intel compiler (ifort).


So, I configured and generated solution with MinGW makefiles and Native

compilers.

Then compiling the generated solutions with mingw32-make leads to the

following errors :

1/ config.h is requested in …openmpi-1.4.3\opal\event but not found.
ð  Solved by adding config.h from …openmpi-1.4.3\opal\event\WIN32-Code
2/ Then : error: redefinition of `struct timezone' … error: conflicting

types for 'gettimeofday' … error: conflicting types for 'gettimeofday'

ð  Any idea would be more than welcome.
I’m aware that it has been addressed before in

http://www.open-mpi.org/community/lists/users/2009/06/9622.php.


3/ I also tried to try mingw32-gcc/g++/gfortran.exe compilers. Without

success.

4/ I also tried with Visual Studio 2010 without success. I only have

Visual Studio C++ Express…

ð  Will I be able to build mpif90/mpif77/orterun/mpirun with these Visual

Studio makefiles coupled with MinGW compilers?


Thanks for your attention&  Best regards,

Fabien Decung

Configurations&  Tools :
-  Open-MPI : 1.4.3
-  MinGW : latest stable (08/2011), using GCC 4.5.2&

C:\MINGW\bin has correctly been updated in PATH.

-  CMake : 2.8.3
-


___
users mailing list

us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
-------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart

http://www.hlrs.de/organization/people/shiqing-fan/

email:
f...@hlrs.de
___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users

Re: [OMPI users] Mingw - Gfortran - Cmake : 'gettimeofday'

[Shiqing Fan]

On 2011-08-31 7:26 PM, Jeff Squyres wrote:

On Aug 31, 2011, at 1:23 PM, Gus Correa wrote:


Hmmm ... maybe it was a mix of both?
 From the very pen ... er ... keyboard (I-phone?, tablet?)
of Jeff Squyres:
http://www.open-mpi.org/community/lists/users/2010/10/14463.php

Good searching!

No, my dim recollection has something to do with functions that are in Windows 
7 / 2008 server, but not in XP.  Perhaps it wasn't gettimeofday...


What Jeff mentioned was related to inet_pton and inet_ntop.

The problem in the first email was caused by building Open MPI in MinGW 
environment, which is not supported yet in 1.4 branch (the testing 
version is in trunk).



Regards,
Shiqing


--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] Mingw - Gfortran - Cmake : 'gettimeofday'

[Shiqing Fan]

Hi Fabien,

The GCC build under MinGW is not supported in Open MPI 1.4.3. The 
initial support is now in trunk, but needs more test.


Actually, you may also try building 1.4.3 with Visual Studio Express 
with Fortran bindings for gfortran. Just configure the solution for 
Visual Studio, and specify the fortran compiler full path and name in 
variable CMAKE_Fortran_COMPILER.


Please try it out. It worked for me before.


Regards,
Shiqing

On 2011-08-30 11:45 PM, Fabien wrote:


Hello,

I'm trying to compile Open-MPI 1.4.3 using {MinGW;CMake} on a 
Vista-32-Bits. I'm interested in running in parallel _a fortran 
program_ (compiled with C:\MINGW\bin\gfortran.exe )


I'm aware that a binary package has been released but -- unfortunately 
-- it has been configured with the Intel compiler (ifort).


So, I configured and generated solution with MinGW makefiles and 
Native compilers.


Then compiling the generated solutions with /mingw32-make/ leads to 
the following errors :


1/ /config.h/ is requested in /...openmpi-1.4.3\opal\event/ but not found.

ðSolved by adding /config.h/ from /...openmpi-1.4.3\opal\event\WIN32-Code/

2/ Then : /error: redefinition of `struct timezone' ... error: 
conflicting types for 'gettimeofday' ... error: conflicting types for 
'gettimeofday'/


ðAny idea would be more than welcome.

I'm aware that it has been addressed before in 
http://www.open-mpi.org/community/lists/users/2009/06/9622.php.


3/ I also tried to try /mingw32-gcc/g++/gfortran.exe/ compilers. 
Without success.


4/ I also tried with Visual Studio 2010 without success. I only have 
Visual Studio C++ Express...


ðWill I be able to build /mpif90/mpif77/orterun/mpirun/ with these 
Visual Studio makefiles coupled with MinGW compilers?


Thanks for your attention & Best regards,

Fabien Decung

Configurations & Tools :

-Open-MPI : 1.4.3

-MinGW : latest stable (08/2011), using GCC 4.5.2 & /C:\MINGW\bin/ has 
correctly been updated in /PATH/.


-CMake : 2.8.3

-



___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
-------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email:f...@hlrs.de

Re: [OMPI users] How to setup and use nodes for OpenMPI on Windows

[Shiqing Fan]

Hi Clinton,

I suggest that you build Open MPI directly on the Windows Server, so 
that the system dependencies wouldn't get wrong. If you just copy around 
the binaries, there will be problems:


your local PC (I guess it's Windows Vista or 7) has inet_pton, but the 
Windows Server 2003 doesn't have it in the system level. So the binaries 
won't work. I'll fix this problem very soon.


Regards,
Shiqing

On 2011-08-10 9:56 AM, Chee, Clinton wrote:


Hi Shiqing,

Thanks very much for your last email -- it was good help. I think my 
questions about security and group permissions on Windows are answered 
with the MSDN links for configuring remote access.


Anyway, I have managed to compile using VS C++ 2008 on my local PC 
(32bit) and it worked.


Then I moved to our Windows Server 2003 x64.

I compiled the x64 test code and and I run it, I got

"The procedure entry point inet_pton could not be located in the 
dynamic link library WS2_32.lib"


1.I found a thread on this message but there was no solution at that 
time.  Has this problem been solved? If yes, How do I fix this?


2.Also I read somewhere in the web that OpenMPI on Windows x64 for 
Fortran does not work properly yet. Is this still true?


Thanks for your help.

___
*Commonwealth*Bank
Clinton Chee
Manager, Quantitative Analytics
Risk Management Centre
Lvl 14, Darling Park, 201 Sussex Street,
Sydney NSW 2000
M: 0402 058 983 P:  61 (0)2 9117 7544
F: 61 (0)2 9118 6509, 1300 711 441
E: clinton.c...@cba.com.au

*Our vision is to be Australia's finest financial services 
organisation through excelling in customer service.*


*From:*Shiqing Fan [mailto:f...@hlrs.de]
*Sent:* Tuesday, 9 August 2011 7:50 PM
*To:* Open MPI Users
*Cc:* Chee, Clinton
*Subject:* Re: [OMPI users] How to setup and use nodes for OpenMPI on 
Windows


Hi Clinton,


Just wondering if anyone can point me to the detailed information on 
how to setup multiple nodes and network them together to use OpenMPI. 
Also what is the proper way to specify which nodes to run on. I wish 
to use OpenMPI on the Windows XP or Windows Server 2008 platform, with 
Intel Fortran 11 as the programming language.



If you use Windows XP, you have to specify --host or --hostfile option 
in the command line. see mpirun --help for more details. On Windows 
server 2008, you can also specify the node names through the Job 
Monitor GUI.



I have searched Google and also looked through the OpenMPI website but 
there does not seem to be any comprehensive documents to run OpenMPI 
on Windows, especially setting up the nodes.



For working on multiple nodes on Windows XP, the only thing you have 
to make sure is that the WMI is able to launch process remotely, which 
referred to the two MSDN links in the WINDOWS.TXT file. Other then 
this, no other special setting is necessary, just install one 
pre-compiled installer, it will configure the environment 
automatically for you.



Many years ago, I played a bit with Mpich and LAM MPI on a purely 
Linux platform. On Linux clusters, it is easy -- the head node see 
each of the compute nodes. As I remember, the programmer need to only 
write the names of the compute nodes in some sort of config file. The 
job is submitted and based on the compute nodes listed, the mpi will 
run on them.


On Windows, what kind of networking is needed to tie the nodes 
together? (assuming we are not using any of the MS HPC Pack or Compute 
Cluster). How do we specify which nodes to use? How do we specify any 
security or group permissions for the nodes?


You should have at least TCP connections among the nodes. I don't 
understand what security and group permissions stands for here.



Regards,
Shiqing




** IMPORTANT MESSAGE *
This e-mail message is intended only for the addressee(s) and contains 
information which may be

confidential.
If you are not the intended recipient please advise the sender by 
return email, do not use or
disclose the contents, and delete the message and any attachments from 
your system. Unless
specifically indicated, this email does not constitute formal advice 
or commitment by the sender
or the Commonwealth Bank of Australia (ABN 48 123 123 124) or its 
subsidiaries.

We can be contacted through our web site: commbank.com.au.
If you no longer wish to receive commercial electronic messages from 
us, please reply to this

e-mail by typing Unsubscribe in the subject line.
**




___
users mailing list
us...@open-mpi.org  <mailto:us...@open-mpi.org>
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
-------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/pe

Re: [OMPI users] [WARNING: SPOOFED E-MAIL--Non-Aerospace Sender] Re: Problem with prebuilt ver 1.5.3 for windows

[Shiqing Fan]

Hi Jeff,

Sorry for answering late. These emails were hidden in another thread in 
my email client, so I didn't catch it until now.


The prebuild version of Open MPI was based on Windows 2008, which has 
InterlockedCompareExchange64 natively.


Windows XP doesn't have support of this function, so the prebuild Open 
MPI is not possible to be used under Windows XP. The only solution now 
is to build Open MPI on your XP from source.



Regards,
Shiqing

On 2011-07-08 1:28 PM, Jeffrey A Cummings wrote:
I've been following this list for several months now and have been 
quite impressed by the helpfulness of the list experts in response to 
most questions.  So how come the pregnant silence in response to my 
question?  I could really use some help here.


- Jeff



From: Jeffrey A Cummings <jeffrey.a.cummi...@aero.org>
To: Open MPI Users <us...@open-mpi.org>
Date: 06/29/2011 04:18 PM
Subject: [WARNING: SPOOFED E-MAIL--Non-Aerospace Sender] Re: [OMPI 
users] Problem with prebuilt ver 1.5.3 for windows

Sent by: users-boun...@open-mpi.org




Anyone (Shiqing perhaps) have any more thoughts on this problem?

- Jeff




From: Damien <dam...@khubla.com>
To: Open MPI Users <us...@open-mpi.org>
Date: 06/24/2011 03:59 PM
Subject: Re: [OMPI users] Problem with prebuilt ver 1.5.3 for windows
Sent by: users-boun...@open-mpi.org




Yeah, and I'm wrong too, InterlockedCompareExchange64 is available on 
32-bit.  I think this is one for Shiqing.


You could build OpenMPI yourself if you have VS2008.  It's pretty easy 
to do.


Damien

On 24/06/2011 1:51 PM, Jeffrey A Cummings wrote:
Damien -

I'm using the 32 bit version of OpenMPI.  I think the 64 refers to the 
size of integer that the function works on, not the operating system 
version.  I didn't have this problem with VS 2008, so I think they've 
changed something in VS 2010.  I just don't know how to fix it.


- Jeff




From: Damien _<dam...@khubla.com>_ <mailto:dam...@khubla.com>
To: Open MPI Users _<us...@open-mpi.org>_ <mailto:us...@open-mpi.org>
Date: 06/24/2011 02:35 PM
Subject: Re: [OMPI users] Problem with prebuilt ver 1.5.3 for windows
Sent by: _users-bounces@open-mpi.org_ <mailto:users-boun...@open-mpi.org>




Jeff,

InterlockedCompareExchange64 is a 64-bit-only instruction.  Are you 
running XP 32-bit (I think you are b/c I don't think there was a XP64 
SP3...).  You need the 32-bit OpenMPI version.  If you are running a 
64-bit OS, but building a 32-bit executable, that instruction isn't 
available in 32-bit and you still need to link with 32-bit OpenMPI.


Damien

On 24/06/2011 12:16 PM, Jeffrey A Cummings wrote:
I'm having a problem using the prebuilt Windows version 1.5.3 with my 
app built with MS VisualStudio 2010.  I get an error message (for each 
node) that says: "The procedure entry point 
InterlockedCompareExchange64 could not be located in the dynamic link 
library KERNEL32.dll".  I'm running Windows XP, sp 3.


- Jeff Cummings


___
users mailing list_
__users@open-mpi.org_ <mailto:us...@open-mpi.org>_
__http://www.open-mpi.org/mailman/listinfo.cgi/users
users mailing list_
__users@open-mpi.org_ <mailto:us...@open-mpi.org>_
__http://www.open-mpi.org/mailman/listinfo.cgi/users_


___
users mailing list_
__users@open-mpi.org_ <mailto:us...@open-mpi.org>_
__http://www.open-mpi.org/mailman/listinfo.cgi/users
users mailing list
users@open-mpi.org_
__http://www.open-mpi.org/mailman/listinfo.cgi/users
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] Windows: msv*.dll files presence in Release build

[Shiqing Fan]

Hi Hiral,


They are dependent libraries for OMPI libraries. It's the default behavior 
using CMake.

How to aviod this? Any workaround or fix?


I'm not sure if it's possible. The msvc dll files are copied for new 
installation on computers, which might not have the required dependencies.



The postfix d means it's a debug version library. You can build release 
libraries which do not have this postfix.

I am building "Release version" from VS2008, even then it builds
*d.dll; how to resolve this?


You have to change CMAKE_BUILD_TYPE to "release" first in the cmake GUI, 
and then change correspondingly the build type in VS.



Regards,
Shiqing



Thank you.
-Hiral


On Mon, Jul 4, 2011 at 5:27 PM, Shiqing Fan<f...@hlrs.de>  wrote:

Hi,

In this regard I have following two questions...
1) For Release build using VS2008, why it generates msv*.dll files?

They are dependent libraries for OMPI libraries. It's the default behavior 
using CMake.

2) For Release build using VS2008, why it generates *d.dll files (i.e. debug 
libraries)?

The postfix d means it's a debug version library. You can build release 
libraries which do not have this postfix.


Regards,
Shiqing

--
-----------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de



--
-----------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] Windows: msv*.dll files presence in Release build

[Shiqing Fan]

Hi,


In this regard I have following two questions...
1) For Release build using VS2008, why it generates *msv*.dll* files?
They are dependent libraries for OMPI libraries. It's the default 
behavior using CMake.


2) For Release build using VS2008, why it generates **d.dll* files 
(i.e. debug libraries)?
The postfix d means it's a debug version library. You can build release 
libraries which do not have this postfix.



Regards,
Shiqing

--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] Building OpenMPI v. 1.4.3 in VS2008

[Shiqing Fan]

Hi Alan,



Thanks Shiqing,

It turns out that I was able to get the build to work in VS2008, by 
stepping back to CMake 2.6 to build it.  Not sure why that did the 
trick but I'm not complaining...




Which version did you use before?

Another question:  Is it possible to run an OpenMPI-based executable 
on a single process, without invoking mpiexec?  Say for example that I 
compiled a simple "Hello world" program such as 
src/examples/hello_cxx.cc that calls MPI_Init(...).  I'd like to start 
it up (as a serial process) by just calling it from the command line, 
without reference to mpiexec.  Can this be done?  If so, could you 
provide an example syntax?  I'm used to doing this with MPICH2, where 
it works with no problem.




Yes, just run your compiled hello_cxx.exe in the command line prompt, 
nothing special.



Regards,
Shiqing


Thanks,

Alan Nichols

AWR - STAAR

11520 N. Port Washington Rd.

Mequon, WI 53092

P: 1.262.240.0291 x 103

F: 1.262.240.0294

E: anich...@awrcorp.com <mailto:anich...@awrcorp.com>

http://www.awrcorp.com <http://www.awrcorp.com/>

*From:*Shiqing Fan [mailto:f...@hlrs.de]
*Sent:* Tuesday, June 21, 2011 3:10 AM
*To:* Alan Nichols
*Cc:* Open MPI Users
*Subject:* Re: [OMPI users] Building OpenMPI v. 1.4.3 in VS2008


Hi Alan,

I was able to test it again on a machine that has a VS2008 installed. 
But everything worked just fine for me. I looked into the generated 
config file(build_dir/opal/include/opal_config.h), and the CMake build 
system didn't find stdint.h, but it still compiled.


So it was probably some other issues on your platform. It would be 
very helpful for me to figure out the problem, if you can provide more 
information, e.g. configure log, compilation error messages and so on.



Regards,
Shiqing

On 2011-06-10 8:34 PM, Alan Nichols wrote:

Hi Shiquing,

OK I'll give this a try... however, I realized after some Google 
searching in the aftermath of my previous attempt to build on VS2008 
that the file that I'm missing on that platform is shipped with VS2010.


So I suspect that building on VS2010 will go smoothly as you said. My 
problem is that my current effort is part of a much larger project 
that is being built on VS2008. On the one hand I don't want at all to 
shift that larger code base from VS2008 to VS2010 (and fight the 
numerous problems that always follow an upheaval of that sort); on the 
other hand I'm dubious about trying to build my parallel support 
library on VS2010 and the rest of the code  on VS2008.


Is there a way to do what I really want to do, which is build the 
openmpi source on VS2008?


Alan Nichols

AWR - STAAR

11520 N. Port Washington Rd.

Mequon, WI 53092

P: 1.262.240.0291 x 103

F: 1.262.240.0294

E: anich...@awrcorp.com <mailto:anich...@awrcorp.com>

http://www.awrcorp.com <http://www.awrcorp.com/>

*From:*Shiqing Fan [mailto:f...@hlrs.de]
*Sent:* Thursday, June 09, 2011 6:43 PM
*To:* Open MPI Users
*Cc:* Alan Nichols
*Subject:* Re: [OMPI users] Building OpenMPI v. 1.4.3 in VS2008


Hi Alan,

It looks like a problem of using a wrong generator in CMake GUI. I 
double tested a fresh new downloaded 1.4.3 on my win7 machine with 
VS2010, everything worked well.


Please check:
1.  a proper CMake generator is used.
2.  the CMAKE_BUILD_TYPE in CMake GUI and the build type in VS are 
both Release


If the error still happens, please provide me the file name and  line 
number where triggers the error when compiling it.


Regards,
Shiqing

On 2011-06-07 5:37 PM, Alan Nichols wrote:

Hello,

I'm currently trying to build OpenMPI v. 1.4.3 from source, in 
VS2008.  Platform is Win7, SP1 installed ( I realize that this is 
possibly not an ideal approach as v. 1.5.3 has installers for Windows 
binaries.  However for compatibility with other programs I need to use 
v. 1.4.3 if at all possible;  also as I have many other libraries 
build under VS2008, I need to use the VS2008 compiler if at all possible).


Following the README.WINDOWS file I found, I used CMake to build a 
Windows .sln file.  I accepted the default CMake settings, with the 
exception that I only created a Release build of OpenMPI.  Upon my 
first attempt to build the solution, I got an error about a missing 
file stdint.h.  I was able to fix this by including the stdint.h from 
VS2010.  However I now get new errors referencing


__attribute__((__always_inline__))

__asmvolatile__("": : :"memory")

These look to me like linux-specific problems -- is it even possible 
to do what I'm attempting, or are the code bases and compiler 
fundamentally at odds here?  If it is possible can you explain where 
my error lies?


Thanks for your help,

Alan Nichols

  
  
___

users mailing list
us...@open-mpi.org  <mailto:us...@open-mpi.org>
http://www.open-mpi.org/mailman/listinfo.cgi/users





--
-------
Shiqing Fan
Hi

Re: [OMPI users] Building OpenMPI v. 1.4.3 in VS2008

[Shiqing Fan]

Hi Alan,

I was able to test it again on a machine that has a VS2008 installed. 
But everything worked just fine for me. I looked into the generated 
config file(build_dir/opal/include/opal_config.h), and the CMake build 
system didn't find stdint.h, but it still compiled.


So it was probably some other issues on your platform. It would be very 
helpful for me to figure out the problem, if you can provide more 
information, e.g. configure log, compilation error messages and so on.



Regards,
Shiqing

On 2011-06-10 8:34 PM, Alan Nichols wrote:


Hi Shiquing,

OK I'll give this a try... however, I realized after some Google 
searching in the aftermath of my previous attempt to build on VS2008 
that the file that I'm missing on that platform is shipped with VS2010.


So I suspect that building on VS2010 will go smoothly as you said. My 
problem is that my current effort is part of a much larger project 
that is being built on VS2008. On the one hand I don't want at all to 
shift that larger code base from VS2008 to VS2010 (and fight the 
numerous problems that always follow an upheaval of that sort); on the 
other hand I'm dubious about trying to build my parallel support 
library on VS2010 and the rest of the code  on VS2008.


Is there a way to do what I really want to do, which is build the 
openmpi source on VS2008?


Alan Nichols

AWR - STAAR

11520 N. Port Washington Rd.

Mequon, WI 53092

P: 1.262.240.0291 x 103

F: 1.262.240.0294

E: anich...@awrcorp.com <mailto:anich...@awrcorp.com>

http://www.awrcorp.com <http://www.awrcorp.com/>

*From:*Shiqing Fan [mailto:f...@hlrs.de]
*Sent:* Thursday, June 09, 2011 6:43 PM
*To:* Open MPI Users
*Cc:* Alan Nichols
*Subject:* Re: [OMPI users] Building OpenMPI v. 1.4.3 in VS2008


Hi Alan,

It looks like a problem of using a wrong generator in CMake GUI. I 
double tested a fresh new downloaded 1.4.3 on my win7 machine with 
VS2010, everything worked well.


Please check:
1.  a proper CMake generator is used.
2.  the CMAKE_BUILD_TYPE in CMake GUI and the build type in VS are 
both Release


If the error still happens, please provide me the file name and  line 
number where triggers the error when compiling it.


Regards,
Shiqing

On 2011-06-07 5:37 PM, Alan Nichols wrote:

Hello,

I'm currently trying to build OpenMPI v. 1.4.3 from source, in 
VS2008.  Platform is Win7, SP1 installed ( I realize that this is 
possibly not an ideal approach as v. 1.5.3 has installers for Windows 
binaries.  However for compatibility with other programs I need to use 
v. 1.4.3 if at all possible;  also as I have many other libraries 
build under VS2008, I need to use the VS2008 compiler if at all possible).


Following the README.WINDOWS file I found, I used CMake to build a 
Windows .sln file.  I accepted the default CMake settings, with the 
exception that I only created a Release build of OpenMPI.  Upon my 
first attempt to build the solution, I got an error about a missing 
file stdint.h.  I was able to fix this by including the stdint.h from 
VS2010.  However I now get new errors referencing


__attribute__((__always_inline__))

__asmvolatile__("": : :"memory")

These look to me like linux-specific problems -- is it even possible 
to do what I'm attempting, or are the code bases and compiler 
fundamentally at odds here?  If it is possible can you explain where 
my error lies?


Thanks for your help,

Alan Nichols

  
  
___

users mailing list
us...@open-mpi.org  <mailto:us...@open-mpi.org>
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
-----------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email:f...@hlrs.de  <mailto:f...@hlrs.de>



--
-------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] mpi.h:: OMPI_HAVE_FORTRAN_LOGICAL / INTEGER / REAL are set to 0 (zero)

[Shiqing Fan]

Hi,

I did a few tests to reproduce the problem, and found out that it is 
because of using a single cmake cache to handle the fortran settings, so 
in some cases the part of the cache can be refreshed. I'm thinking to 
have a second cache to make it more convenient for users.


So the current solution is just to run "configure" only once after 
enabling OMPI_WANT_F77_BINDINGS. I will implement the update for the 
CMake files soon.



Thanks,
Shiqing


On 2011-05-31 2:32 PM, hi wrote:

Greetings once again !!!

Environment:
OS: Windows 7 64-bit
Compilers: ifort and cl.exe (both 64-bit)
CMAKE: version-2.8.4
OpenMPI: version 1.5.3

As described in the README.WINDOWS.txt, when performing 'First
approach:" I am observing following...
1) via cmake-gui.exe clicked 'Configure' and it shown all config
options in pink color
 see output of this step in attached cmake_gui_output1.txt
2) then I enabled OMPI_WANT_F77_BINDING and OMPI_WANT_F90_BINDING to
true and then clicked 'Configure'.
 see output of this step in attached cmake_gui_output2.txt

As you can observe in cmake_gui_output2.txt file, it succeeded on all
Fortran data types (except INTEGER*16 and REAL*2).
Now what I am observing is that eventho' fortran compiler supports
most of the datatypes, but still mpi.h file reports '0' for
corresponding datatype.

/* Whether we have FORTRAN LOGICAL*1 or not */
#define OMPI_HAVE_FORTRAN_LOGICAL1 0

/* Whether we have FORTRAN LOGICAL*2 or not */
#define OMPI_HAVE_FORTRAN_LOGICAL2 0

/* Whether we have FORTRAN LOGICAL*4 or not */
#define OMPI_HAVE_FORTRAN_LOGICAL4 0

/* Whether we have FORTRAN LOGICAL*8 or not */
#define OMPI_HAVE_FORTRAN_LOGICAL8 0

/* Whether we have FORTRAN INTEGER*1 or not */
#define OMPI_HAVE_FORTRAN_INTEGER1 0

/* Whether we have FORTRAN INTEGER*16 or not */
#define OMPI_HAVE_FORTRAN_INTEGER16 0

/* Whether we have FORTRAN INTEGER*2 or not */
#define OMPI_HAVE_FORTRAN_INTEGER2 0

/* Whether we have FORTRAN INTEGER*4 or not */
#define OMPI_HAVE_FORTRAN_INTEGER4 0

/* Whether we have FORTRAN INTEGER*8 or not */
#define OMPI_HAVE_FORTRAN_INTEGER8 0

/* Whether we have FORTRAN REAL*16 or not */
#define OMPI_HAVE_FORTRAN_REAL16 0

/* Whether we have FORTRAN REAL*2 or not */
#define OMPI_HAVE_FORTRAN_REAL2 0

/* Whether we have FORTRAN REAL*4 or not */
#define OMPI_HAVE_FORTRAN_REAL4 0

/* Whether we have FORTRAN REAL*8 or not */
#define OMPI_HAVE_FORTRAN_REAL8 0
==

Any idea on why mpi.h is setting zero for all above fortran datatypes
despite fortran compiler supports most of the datatypes (see
cmake_gui_output2.txt)???

Thank you in advance.
-Hiral


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
-----------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email:f...@hlrs.de

Re: [OMPI users] FW: Issue with mpicc --showme in windows

[Shiqing Fan]

That's very strange. From my test, everything is just fine, I tried 
"mpif77 --showme" and got following result even I don't have a Intel 
fortran compiler installed:


C:\Program Files\OpenMPI_v1.5.3-win32\bin>mpif77 --showme
ifort.exe /I"C:\Program Files\OpenMPI_v1.5.3-win32\include" /link 
/LIBPATH:"C:\P
rogram Files\OpenMPI_v1.5.3-win32\lib" libmpi_f77d.lib libmpid.lib 
libopen-pald.

lib libopen-rted.lib advapi32.lib Ws2_32.lib shlwapi.lib

Maybe your installation was corrupted? Did you do a normal installation 
without any special configuration? This problem might also happen if you 
directly copy a installed directory from one computer to another, and 
the registry on the second computer doesn't have necessary information.


Could you also look into your registry, and look for 
HKLM\\software\\OpenMPI, if anything exists there, please send me their 
value.



Regards,
Shiqing

On 2011-06-10 5:41 AM, AMARNATH, Balachandar wrote:


Hi,

I use this version 
http://www.open-mpi.org/software/ompi/v1.5/downloads/OpenMPI_v1.5.3-2_win32.exe


Regards

Balachandar

*From:*Shiqing Fan [mailto:f...@hlrs.de]
*Sent:* 10 June 2011 03:31
*To:* Open MPI Users
*Cc:* AMARNATH, Balachandar
*Subject:* Re: [OMPI users] FW: Issue with mpicc --showme in windows

Hi Balachandar,

Which version of OMPI did you use? I know old versions on Windows have 
such problem. Using a newer version will solve your problem.



Regards,
Shiqing

On 2011-05-23 11:45 AM, AMARNATH, Balachandar wrote:

Hi,

I still don't understand why the command is trying to open a 
configuration file from a non-existing location. For me its weird..!! 
May be, I am doing wrong somewhere? Am I missing some environment 
variables which I need to set before starts working with it ?


Regards

Balachandar

_
*From:* AMARNATH, Balachandar
*Sent:* 20 May 2011 17:48
*To:* 'us...@open-mpi.org <mailto:us...@open-mpi.org>'
*Subject:* Issue with mpicc --showme in windows

Hello,

Here in my windows machine, if i ran mpicc --showme, i get erroneous 
output like below:-


**

C:\>C:\Users\BAAMARNA5617\Programs\mpi\OpenMPI_v1.5.3-win32\bin\mpicc.exe 
--showme


Cannot open configuration file 
C:/Users/hpcfan/Documents/OpenMPI/openmpi-1.5.3/i


nstalled-32/share/openmpi\mpif77.exe-wrapper-data.txt

Error parsing data file mpif77.exe: Not found

**

I installed openmpi from 
http://www.open-mpi.org/software/ompi/v1.5/downloads/OpenMPI_v1.5.3-2_win32.exe 
and end up with error.  (Read in a forum that 1.4 version of openmpi 
does not support fortran bindings and hence obtained one of the recent 
releases). Hope to fix this soon,


With thanks and regards

Balachandar

The information in this e-mail is confidential. The contents may not be 
disclosed or used by anyone other than the addressee. Access to this e-mail by 
anyone else is unauthorised.
If you are not the intended recipient, please notify Airbus immediately and 
delete this e-mail.
Airbus cannot accept any responsibility for the accuracy or completeness of 
this e-mail as it has been sent over public networks. If you have any concerns 
over the content of this message or its Accuracy or Integrity, please contact 
Airbus immediately.
All outgoing e-mails from Airbus are checked using regularly updated virus 
scanning software but you should take whatever measures you deem to be 
appropriate to ensure that this message and any attachments are virus free.
  
  
___

users mailing list
us...@open-mpi.org  <mailto:us...@open-mpi.org>
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
-------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email:f...@hlrs.de  <mailto:f...@hlrs.de>
This mail has originated outside your organization, either from an external 
partner or the Global Internet.
Keep this in mind if you answer this message.
  
The information in this e-mail is confidential. The contents may not be disclosed or used by anyone other than the addressee. Access to this e-mail by anyone else is unauthorised.

If you are not the intended recipient, please notify Airbus immediately and 
delete this e-mail.
Airbus cannot accept any responsibility for the accuracy or completeness of 
this e-mail as it has been sent over public networks. If you have any concerns 
over the content of this message or its Accuracy or Integrity, please contact 
Airbus immediately.
All outgoing e-mails from Airbus are checked using regularly updated virus 
scanning software but you should take whatever measures you deem to be 
appropriate to ensure that this message and any attachments are virus free.

Re: [OMPI users] Building OpenMPI v. 1.4.3 in VS2008

[Shiqing Fan]

Hi Alan,

It looks like a problem of using a wrong generator in CMake GUI. I 
double tested a fresh new downloaded 1.4.3 on my win7 machine with 
VS2010, everything worked well.


Please check:
1.  a proper CMake generator is used.
2.  the CMAKE_BUILD_TYPE in CMake GUI and the build type in VS are both 
Release


If the error still happens, please provide me the file name and  line 
number where triggers the error when compiling it.


Regards,
Shiqing

On 2011-06-07 5:37 PM, Alan Nichols wrote:


Hello,

I'm currently trying to build OpenMPI v. 1.4.3 from source, in 
VS2008.  Platform is Win7, SP1 installed ( I realize that this is 
possibly not an ideal approach as v. 1.5.3 has installers for Windows 
binaries.  However for compatibility with other programs I need to use 
v. 1.4.3 if at all possible;  also as I have many other libraries 
build under VS2008, I need to use the VS2008 compiler if at all possible).


Following the README.WINDOWS file I found, I used CMake to build a 
Windows .sln file.  I accepted the default CMake settings, with the 
exception that I only created a Release build of OpenMPI.  Upon my 
first attempt to build the solution, I got an error about a missing 
file stdint.h.  I was able to fix this by including the stdint.h from 
VS2010.  However I now get new errors referencing


__attribute__((__always_inline__))

__asmvolatile__("": : :"memory")

These look to me like linux-specific problems -- is it even possible 
to do what I'm attempting, or are the code bases and compiler 
fundamentally at odds here?  If it is possible can you explain where 
my error lies?


Thanks for your help,

Alan Nichols


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
-------
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] FW: Issue with mpicc --showme in windows

[Shiqing Fan]

Hi Balachandar,

Which version of OMPI did you use? I know old versions on Windows have 
such problem. Using a newer version will solve your problem.



Regards,
Shiqing

On 2011-05-23 11:45 AM, AMARNATH, Balachandar wrote:

Hi,
I still don't understand why the command is trying to open a 
configuration file from a non-existing location. For me its weird..!! 
May be, I am doing wrong somewhere? Am I missing some environment 
variables which I need to set before starts working with it ?

Regards
Balachandar
_
*From:* AMARNATH, Balachandar
*Sent:* 20 May 2011 17:48
*To:* 'us...@open-mpi.org'
*Subject:* Issue with mpicc --showme in windows
Hello,
Here in my windows machine, if i ran mpicc --showme, i get erroneous 
output like below:-

**
C:\>C:\Users\BAAMARNA5617\Programs\mpi\OpenMPI_v1.5.3-win32\bin\mpicc.exe 
--showme
Cannot open configuration file 
C:/Users/hpcfan/Documents/OpenMPI/openmpi-1.5.3/i

nstalled-32/share/openmpi\mpif77.exe-wrapper-data.txt
Error parsing data file mpif77.exe: Not found
**
I installed openmpi from 
_http://www.open-mpi.org/software/ompi/v1.5/downloads/OpenMPI_v1.5.3-2_win32.exe_ 
and end up with error.  (Read in a forum that 1.4 version of openmpi 
does not support fortran bindings and hence obtained one of the recent 
releases). Hope to fix this soon,

With thanks and regards
Balachandar
The information in this e-mail is confidential. The contents may not be 
disclosed or used by anyone other than the addressee. Access to this e-mail by 
anyone else is unauthorised.
If you are not the intended recipient, please notify Airbus immediately and 
delete this e-mail.
Airbus cannot accept any responsibility for the accuracy or completeness of 
this e-mail as it has been sent over public networks. If you have any concerns 
over the content of this message or its Accuracy or Integrity, please contact 
Airbus immediately.
All outgoing e-mails from Airbus are checked using regularly updated virus 
scanning software but you should take whatever measures you deem to be 
appropriate to ensure that this message and any attachments are virus free.


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] missing symbols in Windows 1.5.3 binaries?

[Shiqing Fan]

Hi Damien,

Which version of Intel MPI do you use? The only difference between 1.5.3 
and .1.52 I can tell is that 1.5.3 was built with Intel Fortran Composer 
XE 2011. That might be the reason of the problem.


Shiqing

On 4/16/2011 4:01 AM, Damien wrote:

Hiya,

I just tested the 1.5.3 binaries and my link pass broke.  Using 1.5.3 
I get unresolved externals on things like _MPI_NULL_COPY_FN.  On 
1.5.2.2 it's fine.  I did a dumpbin on libmpi.lib for both versions, 
and in 1.5.3 there's upper-case symbols for _OMPI_C_MPI_NULL_COPY_FN, 
but not _MPI_NULL_COPY_FN.  In the 1.5.2.2 libmpi.lib there's symbols 
for both.


Damien
___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] Building OpenMPI on Windows 7

[Shiqing Fan]

Hi Hiral,

You have to add "OMPI_IMPORTS" as a preprocessor definition in you 
project configuration. Or a easier way is to use the mpicc command line.


Please also take a look into the output of "mpicc --showme", it will 
give you the complete compile options.



Regards,
Shiqing

On 3/22/2011 10:36 AM, hi wrote:

Hi Shiqing,
While building my application (on Windows 7, Vistual Studio 2008 
32-bit application) with openmpi-1.5.2, getting following error...

util.o : error LNK2001: unresolved external symbol _ompi_mpi_byte
util.o : error LNK2001: unresolved external symbol _ompi_mpi_op_max
util.o : error LNK2001: unresolved external symbol _ompi_mpi_int
util.o : error LNK2001: unresolved external symbol _ompi_mpi_char
util.o : error LNK2001: unresolved external symbol _ompi_mpi_comm_world
util.o : error LNK2001: unresolved external symbol _ompi_mpi_op_sum
Linking options...
/LIBPATH:""c:\openmpi-1.5.2\installed"/lib/" libmpi_cxxd.lib 
libmpid.lib libmpi_f77d.lib libopen-pald.lib libopen-rted.lib

I seems that 'dllexport' is missing for above symbols.
Thank you.
-Hiral

On Fri, Mar 18, 2011 at 1:53 AM, Shiqing Fan <f...@hlrs.de 
<mailto:f...@hlrs.de>> wrote:


Hi Hiral,



> There is no f90 bindings at moment for Windows.
Any idea when this available?

At moment, no. But only if there is strong requirements.



Regards,
Shiqing


Thank you.
    -Hiral
On Thu, Mar 17, 2011 at 5:21 PM, Shiqing Fan <f...@hlrs.de
<mailto:f...@hlrs.de>> wrote:



I tried building openmpi-1.5.2 on Windows 7 (as described
below environment) with OMPI_WANT_F77_BINDINGS_ON and
OMPI_WANT_F90_BINDINGS_ON using "ifort".
I observed that it has generated mpif77.exe but didn't
generated mpif90.exe, any idea???


There is no f90 bindings at moment for Windows.



BTW: while using above generated mpif77.exe to compile
hello_f77.f got following errors...

c:\openmpi-1.5.2\examples> mpif77 hello_f77.f
Intel(R) Visual Fortran Compiler Professional for
applications running on IA-32,
 Version 11.1Build 20100414 Package ID:
w_cprof_p_11.1.065
Copyright (C) 1985-2010 Intel Corporation.  All rights
reserved.
C:/openmpi-1.5.2/installed/include\mpif-config.h(91):
error #5082: Syntax error,
 found ')' when expecting one of: ( 
...
  parameter (MPI_STATUS_SIZE=)
-^
compilation aborted for hello_f77.f (code 1)


It seems MPI_STATUS_SIZE is not set. Could you please send me
your CMakeCache.txt to me off the mailing list, so that I can
check what is going wrong? A quick solution would be just set
it to 0.


Regards,
Shiqing


Thank you.
-Hiral
On Wed, Mar 16, 2011 at 8:11 PM, Damien <dam...@khubla.com
<mailto:dam...@khubla.com>> wrote:

Hiral,
To add to Shiqing's comments, 1.5 has been running great
for me on Windows for over 6 months since it was in
    beta.  You should give it a try.
Damien
On 16/03/2011 8:34 AM, Shiqing Fan wrote:

Hi Hiral,

> it's only experimental in 1.4 series. And there is
only F77 bingdings on Windows, no F90 bindings.
Can you please provide steps to build 1.4.3 with
experimental f77 bindings on Windows?

Well, I highly recommend to use 1.5 series, but I can
also take a look and probably provide you a patch for
1.4 .

BTW: Do you have any idea on: when next stable release
with full fortran support on Windows would be available?

There is no plan yet.
Regards,
Shiqing

    Thank you.
-Hiral
On Wed, Mar 16, 2011 at 6:59 PM, Shiqing Fan
<f...@hlrs.de <mailto:f...@hlrs.de>> wrote:

Hi Hiral,
1.3.4 is quite old, please use the latest version.
As Damien noted, the full fortran support is in
1.5 series, it's only experimental in 1.4 series.
And there is only F77 bingdings on Windows, no F90
bindings. Another choice is to use the released
binary installers to avoid compiling everything by
yourself.
Best Regards,
Shiqing
On 3/16/2011 11:47 AM, hi wrote:


Greetings!!!

I am trying to build openmpi-1.3.4 and
openmpi-1.4.3 on Windows 7 (64-bit OS), but
getting some difficuty...

My build environment:

OS : Win

Re: [OMPI users] Building OpenMPI on Windows 7

[Shiqing Fan]

Hi Hiral,


> There is no f90 bindings at moment for Windows.
Any idea when this available?

At moment, no. But only if there is strong requirements.


Regards,
Shiqing


Thank you.
-Hiral
On Thu, Mar 17, 2011 at 5:21 PM, Shiqing Fan <f...@hlrs.de 
<mailto:f...@hlrs.de>> wrote:




I tried building openmpi-1.5.2 on Windows 7 (as described below
environment) with OMPI_WANT_F77_BINDINGS_ON and
OMPI_WANT_F90_BINDINGS_ON using "ifort".
I observed that it has generated mpif77.exe but didn't generated
mpif90.exe, any idea???


There is no f90 bindings at moment for Windows.



BTW: while using above generated mpif77.exe to compile
hello_f77.f got following errors...

c:\openmpi-1.5.2\examples> mpif77 hello_f77.f
Intel(R) Visual Fortran Compiler Professional for
applications running on IA-32,
 Version 11.1Build 20100414 Package ID: w_cprof_p_11.1.065
Copyright (C) 1985-2010 Intel Corporation.  All rights reserved.
C:/openmpi-1.5.2/installed/include\mpif-config.h(91): error
#5082: Syntax error,
 found ')' when expecting one of: ( 
...
  parameter (MPI_STATUS_SIZE=)
-^
compilation aborted for hello_f77.f (code 1)


It seems MPI_STATUS_SIZE is not set. Could you please send me your
CMakeCache.txt to me off the mailing list, so that I can check
what is going wrong? A quick solution would be just set it to 0.


Regards,
Shiqing


Thank you.
-Hiral
On Wed, Mar 16, 2011 at 8:11 PM, Damien <dam...@khubla.com
<mailto:dam...@khubla.com>> wrote:

Hiral,
To add to Shiqing's comments, 1.5 has been running great for
me on Windows for over 6 months since it was in beta.  You
should give it a try.
    Damien
    On 16/03/2011 8:34 AM, Shiqing Fan wrote:

Hi Hiral,

> it's only experimental in 1.4 series. And there is only
F77 bingdings on Windows, no F90 bindings.
Can you please provide steps to build 1.4.3 with
experimental f77 bindings on Windows?

Well, I highly recommend to use 1.5 series, but I can also
take a look and probably provide you a patch for 1.4 .

BTW: Do you have any idea on: when next stable release with
full fortran support on Windows would be available?

There is no plan yet.
Regards,
Shiqing

Thank you.
-Hiral
    On Wed, Mar 16, 2011 at 6:59 PM, Shiqing Fan <f...@hlrs.de
<mailto:f...@hlrs.de>> wrote:

Hi Hiral,
1.3.4 is quite old, please use the latest version. As
Damien noted, the full fortran support is in 1.5
series, it's only experimental in 1.4 series. And there
is only F77 bingdings on Windows, no F90 bindings.
Another choice is to use the released binary installers
to avoid compiling everything by yourself.
Best Regards,
Shiqing
On 3/16/2011 11:47 AM, hi wrote:


Greetings!!!

I am trying to build openmpi-1.3.4 and openmpi-1.4.3
on Windows 7 (64-bit OS), but getting some difficuty...

My build environment:

OS : Windows 7 (64-bit)

C/C++ compiler : Visual Studio 2008 and Visual Studio 2010

Fortran compiler: Intel "ifort"

Approach: followed the "First Approach" described in
README.WINDOWS file.

*1) Using openmpi-1.3.4:***

Observed build time error in version.cc(136). This
error is related to getting SVN version information as
described in
http://www.open-mpi.org/community/lists/users/2010/01/11860.php.
As we are using this openmpi-1.3.4 stable version on
Linux platform, is there any fix to this compile time
error?

*2) Using openmpi-1.4.3:***

Builds properly without F77/F90 support (i.e. i.e.
Skipping MPI F77 interface).

Now to get the "mpif*.exe" for fortran programs, I
provided proper "ifort" path and enabled
"OMPI_WANT_F77_BINDINGS=ON" and/or
OMPI_WANT_F90_BINDINGS=ON flag; but getting following
errors...

*   2.a) "ifort" with OMPI_WANT_F77_BINDINGS=ON gave
following errors... *

Check ifort external symbol convention...

Check ifort external symbol convention...single underscore

Check if Fortran 77 compiler supports LOGICAL...

Check if Fortran 77 compiler supports LOGICAL...done

Check size of Fortran 77 LOGICAL...

CMake Error at
contrib/platform/win32/CMakeModules/f77_get_siz

Re: [OMPI users] Building OpenMPI on Windows 7

[Shiqing Fan]

I tried building openmpi-1.5.2 on Windows 7 (as described below 
environment) with OMPI_WANT_F77_BINDINGS_ON and

OMPI_WANT_F90_BINDINGS_ON using "ifort".
I observed that it has generated mpif77.exe but didn't generated 
mpif90.exe, any idea???


There is no f90 bindings at moment for Windows.

BTW: while using above generated mpif77.exe to compile hello_f77.f got 
following errors...


c:\openmpi-1.5.2\examples> mpif77 hello_f77.f
Intel(R) Visual Fortran Compiler Professional for applications
running on IA-32,
 Version 11.1Build 20100414 Package ID: w_cprof_p_11.1.065
Copyright (C) 1985-2010 Intel Corporation.  All rights reserved.
C:/openmpi-1.5.2/installed/include\mpif-config.h(91): error #5082:
Syntax error,
 found ')' when expecting one of: ( 
...
  parameter (MPI_STATUS_SIZE=)
-^
compilation aborted for hello_f77.f (code 1)

It seems MPI_STATUS_SIZE is not set. Could you please send me your 
CMakeCache.txt to me off the mailing list, so that I can check what is 
going wrong? A quick solution would be just set it to 0.


Regards,
Shiqing


Thank you.
-Hiral
On Wed, Mar 16, 2011 at 8:11 PM, Damien <dam...@khubla.com 
<mailto:dam...@khubla.com>> wrote:


Hiral,
To add to Shiqing's comments, 1.5 has been running great for me on
Windows for over 6 months since it was in beta.  You should give
it a try.
Damien
    On 16/03/2011 8:34 AM, Shiqing Fan wrote:

Hi Hiral,

> it's only experimental in 1.4 series. And there is only F77
bingdings on Windows, no F90 bindings.
Can you please provide steps to build 1.4.3 with experimental
f77 bindings on Windows?

Well, I highly recommend to use 1.5 series, but I can also take a
look and probably provide you a patch for 1.4 .

BTW: Do you have any idea on: when next stable release with full
fortran support on Windows would be available?

There is no plan yet.
Regards,
Shiqing

Thank you.
-Hiral
On Wed, Mar 16, 2011 at 6:59 PM, Shiqing Fan <f...@hlrs.de
<mailto:f...@hlrs.de>> wrote:

Hi Hiral,
1.3.4 is quite old, please use the latest version. As Damien
noted, the full fortran support is in 1.5 series, it's only
experimental in 1.4 series. And there is only F77 bingdings
on Windows, no F90 bindings. Another choice is to use the
released binary installers to avoid compiling everything by
yourself.
Best Regards,
Shiqing
On 3/16/2011 11:47 AM, hi wrote:


Greetings!!!

I am trying to build openmpi-1.3.4 and openmpi-1.4.3 on
Windows 7 (64-bit OS), but getting some difficuty...

My build environment:

OS : Windows 7 (64-bit)

C/C++ compiler : Visual Studio 2008 and Visual Studio 2010

Fortran compiler: Intel "ifort"

Approach: followed the "First Approach" described in
README.WINDOWS file.

*1) Using openmpi-1.3.4:***

Observed build time error in version.cc(136). This
error is related to getting SVN version information as
described in
http://www.open-mpi.org/community/lists/users/2010/01/11860.php.
As we are using this openmpi-1.3.4 stable version on Linux
platform, is there any fix to this compile time error?

*2) Using openmpi-1.4.3:***

Builds properly without F77/F90 support (i.e. i.e.
Skipping MPI F77 interface).

Now to get the "mpif*.exe" for fortran programs, I
provided proper "ifort" path and enabled
"OMPI_WANT_F77_BINDINGS=ON" and/or
OMPI_WANT_F90_BINDINGS=ON flag; but getting following errors...

*   2.a) "ifort" with OMPI_WANT_F77_BINDINGS=ON gave
following errors... *

Check ifort external symbol convention...

Check ifort external symbol convention...single underscore

Check if Fortran 77 compiler supports LOGICAL...

Check if Fortran 77 compiler supports LOGICAL...done

Check size of Fortran 77 LOGICAL...

CMake Error at
contrib/platform/win32/CMakeModules/f77_get_sizeof.cmake:76
(MESSAGE):

Could not determine size of LOGICAL.

Call Stack (most recent call first):

contrib/platform/win32/CMakeModules/f77_check.cmake:82
(OMPI_F77_GET_SIZEOF)

contrib/platform/win32/CMakeModules/ompi_configure.cmake:1123
(OMPI_F77_CHECK)

CMakeLists.txt:87 (INCLUDE)

Configuring incomplete, errors occurred!

*2.b) "ifort" with OMPI_WANT_F90_BINDINGS=ON gave following
errors... *

Skipping MPI F77 interface

CMake Error: File

C:/openmpi-1.4.3/contrib/platform/win32/ConfigFiles/mpif90-wrapper-data.txt.cmake
does not exist.

Re: [OMPI users] Building OpenMPI on Windows 7

[Shiqing Fan]

Hi Hiral,

> it's only experimental in 1.4 series. And there is only F77 
bingdings on Windows, no F90 bindings.
Can you please provide steps to build 1.4.3 with experimental f77 
bindings on Windows?
Well, I highly recommend to use 1.5 series, but I can also take a look 
and probably provide you a patch for 1.4 .


BTW: Do you have any idea on: when next stable release with full 
fortran support on Windows would be available?

There is no plan yet.


Regards,
Shiqing


Thank you.
-Hiral
On Wed, Mar 16, 2011 at 6:59 PM, Shiqing Fan <f...@hlrs.de 
<mailto:f...@hlrs.de>> wrote:


Hi Hiral,

1.3.4 is quite old, please use the latest version. As Damien
noted, the full fortran support is in 1.5 series, it's only
experimental in 1.4 series. And there is only F77 bingdings on
Windows, no F90 bindings. Another choice is to use the released
binary installers to avoid compiling everything by yourself.


Best Regards,
Shiqing


On 3/16/2011 11:47 AM, hi wrote:


Greetings!!!

I am trying to build openmpi-1.3.4 and openmpi-1.4.3 on Windows 7
(64-bit OS), but getting some difficuty...

My build environment:

OS : Windows 7 (64-bit)

C/C++ compiler : Visual Studio 2008 and Visual Studio 2010

Fortran compiler: Intel "ifort"

Approach: followed the "First Approach" described in
README.WINDOWS file.

*1) Using openmpi-1.3.4:***

Observed build time error in version.cc(136). This error is
related to getting SVN version information as described in
http://www.open-mpi.org/community/lists/users/2010/01/11860.php.
As we are using this openmpi-1.3.4 stable version on Linux
platform, is there any fix to this compile time error?

*2) Using openmpi-1.4.3:***

Builds properly without F77/F90 support (i.e. i.e. Skipping
MPI F77 interface).

Now to get the "mpif*.exe" for fortran programs, I provided
proper "ifort" path and enabled "OMPI_WANT_F77_BINDINGS=ON"
and/or OMPI_WANT_F90_BINDINGS=ON flag; but getting following
errors...

*   2.a) "ifort" with OMPI_WANT_F77_BINDINGS=ON gave following
errors... *

Check ifort external symbol convention...

Check ifort external symbol convention...single underscore

Check if Fortran 77 compiler supports LOGICAL...

Check if Fortran 77 compiler supports LOGICAL...done

Check size of Fortran 77 LOGICAL...

CMake Error at
contrib/platform/win32/CMakeModules/f77_get_sizeof.cmake:76
(MESSAGE):

Could not determine size of LOGICAL.

Call Stack (most recent call first):

contrib/platform/win32/CMakeModules/f77_check.cmake:82
(OMPI_F77_GET_SIZEOF)

contrib/platform/win32/CMakeModules/ompi_configure.cmake:1123
(OMPI_F77_CHECK)

CMakeLists.txt:87 (INCLUDE)

Configuring incomplete, errors occurred!

*2.b) "ifort" with OMPI_WANT_F90_BINDINGS=ON gave following
errors... *

Skipping MPI F77 interface

CMake Error: File

C:/openmpi-1.4.3/contrib/platform/win32/ConfigFiles/mpif90-wrapper-data.txt.cmake
does not exist.

CMake Error at ompi/tools/CMakeLists.txt:93 (CONFIGURE_FILE):

configure_file Problem configuring file

CMake Error: File

C:/openmpi-1.4.3/contrib/platform/win32/ConfigFiles/mpif90-wrapper-data.txt.cmake
does not exist.

CMake Error at ompi/tools/CMakeLists.txt:97 (CONFIGURE_FILE):

configure_file Problem configuring file

looking for ccp...

looking for ccp...not found.

looking for ccp...

looking for ccp...not found.

Configuring incomplete, errors occurred!

*2.c) "ifort" with OMPI_WANT_F77_BINDINGS=ON and
OMPI_WANT_F90_BINDINGS=ON gave following errors... *

Check ifort external symbol convention...

Check ifort external symbol convention...single underscore

Check if Fortran 77 compiler supports LOGICAL...

Check if Fortran 77 compiler supports LOGICAL...done

Check size of Fortran 77 LOGICAL...

CMake Error at
contrib/platform/win32/CMakeModules/f77_get_sizeof.cmake:76
(MESSAGE):

Could not determine size of LOGICAL.

Call Stack (most recent call first):

contrib/platform/win32/CMakeModules/f77_check.cmake:82
(OMPI_F77_GET_SIZEOF)

contrib/platform/win32/CMakeModules/ompi_configure.cmake:1123
(OMPI_F77_CHECK)

CMakeLists.txt:87 (INCLUDE)

Configuring incomplete, errors occurred!

Any idea on resolving above errors to get mpif*.exe generated on
Windows platform using "ifort"?

Please let me know if more information is required.
Thank you in advance.

-Hiral


___
users mailing list
us...@open-mpi.org  <mailto:us...@open-mpi.org>
http://www.open-mpi.org/mailman/listinfo.cgi/users



-- 
--

Re: [OMPI users] Building OpenMPI on Windows 7

[Shiqing Fan]

Hi Hiral,

1.3.4 is quite old, please use the latest version. As Damien noted, the 
full fortran support is in 1.5 series, it's only experimental in 1.4 
series. And there is only F77 bingdings on Windows, no F90 bindings. 
Another choice is to use the released binary installers to avoid 
compiling everything by yourself.



Best Regards,
Shiqing

On 3/16/2011 11:47 AM, hi wrote:


Greetings!!!

I am trying to build openmpi-1.3.4 and openmpi-1.4.3 on Windows 7 
(64-bit OS), but getting some difficuty...


My build environment:

OS : Windows 7 (64-bit)

C/C++ compiler : Visual Studio 2008 and Visual Studio 2010

Fortran compiler: Intel "ifort"

Approach: followed the "First Approach" described in README.WINDOWS file.

*1) Using openmpi-1.3.4:***

Observed build time error in version.cc(136). This error is 
related to getting SVN version information as described in 
http://www.open-mpi.org/community/lists/users/2010/01/11860.php. As we 
are using this openmpi-1.3.4 stable version on Linux platform, is 
there any fix to this compile time error?


*2) Using openmpi-1.4.3:***

Builds properly without F77/F90 support (i.e. i.e. Skipping MPI 
F77 interface).


Now to get the "mpif*.exe" for fortran programs, I provided proper 
"ifort" path and enabled "OMPI_WANT_F77_BINDINGS=ON" and/or 
OMPI_WANT_F90_BINDINGS=ON flag; but getting following errors...


*   2.a) "ifort" with OMPI_WANT_F77_BINDINGS=ON gave following errors... *

Check ifort external symbol convention...

Check ifort external symbol convention...single underscore

Check if Fortran 77 compiler supports LOGICAL...

Check if Fortran 77 compiler supports LOGICAL...done

Check size of Fortran 77 LOGICAL...

CMake Error at 
contrib/platform/win32/CMakeModules/f77_get_sizeof.cmake:76 (MESSAGE):


Could not determine size of LOGICAL.

Call Stack (most recent call first):

contrib/platform/win32/CMakeModules/f77_check.cmake:82 
(OMPI_F77_GET_SIZEOF)


contrib/platform/win32/CMakeModules/ompi_configure.cmake:1123 
(OMPI_F77_CHECK)


CMakeLists.txt:87 (INCLUDE)

Configuring incomplete, errors occurred!

*2.b) "ifort" with OMPI_WANT_F90_BINDINGS=ON gave following errors... *

Skipping MPI F77 interface

CMake Error: File 
C:/openmpi-1.4.3/contrib/platform/win32/ConfigFiles/mpif90-wrapper-data.txt.cmake 
does not exist.


CMake Error at ompi/tools/CMakeLists.txt:93 (CONFIGURE_FILE):

configure_file Problem configuring file

CMake Error: File 
C:/openmpi-1.4.3/contrib/platform/win32/ConfigFiles/mpif90-wrapper-data.txt.cmake 
does not exist.


CMake Error at ompi/tools/CMakeLists.txt:97 (CONFIGURE_FILE):

configure_file Problem configuring file

looking for ccp...

looking for ccp...not found.

looking for ccp...

looking for ccp...not found.

Configuring incomplete, errors occurred!

*2.c) "ifort" with OMPI_WANT_F77_BINDINGS=ON and 
OMPI_WANT_F90_BINDINGS=ON gave following errors... *


Check ifort external symbol convention...

Check ifort external symbol convention...single underscore

Check if Fortran 77 compiler supports LOGICAL...

Check if Fortran 77 compiler supports LOGICAL...done

Check size of Fortran 77 LOGICAL...

CMake Error at 
contrib/platform/win32/CMakeModules/f77_get_sizeof.cmake:76 (MESSAGE):


Could not determine size of LOGICAL.

Call Stack (most recent call first):

contrib/platform/win32/CMakeModules/f77_check.cmake:82 
(OMPI_F77_GET_SIZEOF)


contrib/platform/win32/CMakeModules/ompi_configure.cmake:1123 
(OMPI_F77_CHECK)


CMakeLists.txt:87 (INCLUDE)

Configuring incomplete, errors occurred!

Any idea on resolving above errors to get mpif*.exe generated on 
Windows platform using "ifort"?


Please let me know if more information is required.
Thank you in advance.

-Hiral


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
---
Shiqing Fan
High Performance Computing Center Stuttgart (HLRS)
Tel: ++49(0)711-685-87234  Nobelstrasse 19
Fax: ++49(0)711-685-65832  70569 Stuttgart
http://www.hlrs.de/organization/people/shiqing-fan/
email: f...@hlrs.de

Re: [OMPI users] Windows release 1.5.1

[Shiqing Fan]

Hi Andy,

I see the problem, your version is not up-to-date, as it is shown 
"16/12/2010" in your jpeg. You can go to Open MPI website, and download 
the latest one, which was out on 1st, Feb.



Regards,
Shiqing

On 2/3/2011 2:28 PM, Page, Andy (UK) wrote:

Shiqing
Thanks for reply.
Maybe i was niot that clear in what i meant.
I was looking for a library mpi_f77.lib and mpif.h neither of which i 
could see in the install direction see attached jpeg


----
*From:* Shiqing Fan [mailto:f...@hlrs.de]
*Sent:* 03 February 2011 13:20
*To:* Open MPI Users
*Cc:* Page, Andy (UK)
*Subject:* Re: [OMPI users] Windows release 1.5.1

*** WARNING ***

  This message has originated outside your organisation,
  either from an external partner or the Global Internet.
  Keep this in mind if you answer this message.
Hi,

I'm not sure if I got it correct. The libraries provided in the 
installers are MPI libraries with Fortran bindings, but they are not 
the Fortran libraries.


If you want to compile Open MPI, you need to install a Fortran 
compiler, for example, Intel Fortran Compiler. And in the CMake GUI, 
you'll be able to enable building MPI Fortran bindings.



Regards,
Shiqing


On 2/3/2011 11:53 AM, Page, Andy (UK) wrote:

Dear Users,
I am looking to compile on windows against openmpi in particular the 
Fortran libraries,
I looked at the *MS Release notes for 1.5.1* and it gave the 
*impression Fortran libraries were included but* after installing *i 
dont see them !!*

Can you advise what i am doing wrong.
Can i download just the Fortran side of openmpi and compile it up ( 
using hopefully a vsiual studio project file) ?

Or should a download the full release and try compiling it up ?
Cheers.
BAE Systems (Operations) Limited
Registered Office: Warwick House, PO Box 87, Farnborough Aerospace 
Centre, Farnborough, Hants, GU14 6YU, UK

Registered in England & Wales No: 1996687


This email and any attachments are confidential to the intended
recipient and may also be privileged. If you are not the intended
recipient please delete it from your system and notify the sender.
You should not copy it or use it for any purpose nor disclose or
distribute its contents to any other person.



___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users

Re: [OMPI users] Windows release 1.5.1

[Shiqing Fan]

Hi,

I'm not sure if I got it correct. The libraries provided in the 
installers are MPI libraries with Fortran bindings, but they are not the 
Fortran libraries.


If you want to compile Open MPI, you need to install a Fortran compiler, 
for example, Intel Fortran Compiler. And in the CMake GUI, you'll be 
able to enable building MPI Fortran bindings.



Regards,
Shiqing


On 2/3/2011 11:53 AM, Page, Andy (UK) wrote:

Dear Users,
I am looking to compile on windows against openmpi in particular the 
Fortran libraries,
I looked at the *MS Release notes for 1.5.1* and it gave the 
*impression Fortran libraries were included but* after installing *i 
dont see them !!*

Can you advise what i am doing wrong.
Can i download just the Fortran side of openmpi and compile it up ( 
using hopefully a vsiual studio project file) ?

Or should a download the full release and try compiling it up ?
Cheers.
BAE Systems (Operations) Limited
Registered Office: Warwick House, PO Box 87, Farnborough Aerospace 
Centre, Farnborough, Hants, GU14 6YU, UK

Registered in England & Wales No: 1996687


This email and any attachments are confidential to the intended
recipient and may also be privileged. If you are not the intended
recipient please delete it from your system and notify the sender.
You should not copy it or use it for any purpose nor disclose or
distribute its contents to any other person.



___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users

[OMPI users] Open MPI v1.5.1 Windows Installer with Fortran 77 bindings released

[Shiqing Fan]

The Open MPI Team, representing a consortium of research, academic, and 
industry partners, is pleased to announce the release of Open MPI 
version 1.5.1 Windows Installers with Fortran 77 bindings. This release 
is an Fortran 77 bindings update over the previous v1.5.1 release. We 
recommend that all users upgrade to this latest version when possible.


The latest Open MPI Windows installers can be downloaded from the main 
Open MPI web site or any of its mirrors (mirrors will be updating shortly).


Many thanks to Damien Hocking who helped us with Intel Fortran compiler 
issues for the Windows binaries.

Re: [OMPI users] Windows installers of 1.5.1 - No Fortan ?

[Shiqing Fan]

Hi Damien,

Unfortunately, we don't have a valid license for Intel Fortran compiler 
at moment on the machine that we built this installer.



Regards,
Shiqing


On 12/29/2010 6:47 AM, Damien Hocking wrote:

Jeff, Shiqing, anyone...

I notice there's no Fortan support in the Windows binary versions of 
1.5.1 on the website.  Is that a deliberate decision?


Damien
___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users

Re: [OMPI users] Open MPI on Cygwin

[Shiqing Fan]

Hi Siegmar,

Building Open MPI under Cygwin is not the way we recommend, it's not 
easy, and the building time is extremely long. Actually if you have 
CMake and Visual Studio installed, then it's pretty easy to build Open 
MPI binary, but of course you have to port your GNU makefiles.


If there is anything I can help, e.g. providing an installer of Open MPI 
binary, please just let me know.


Regards,
Shiqing

On 12/10/2010 3:54 PM, Siegmar Gross wrote:

Hello Shiqing,

thank you very much for your reply. I want a working MPI implementation on my
Notebook. At the moment I still use LAM-MPI on Cygwin on Windows XP
Professional
SP3. Unfortunately LAM-MPI will not be supported any longer so that I am
looking for a replacement. I use MPI for my courses and I implement small
programs on my Notebook before I run them on our Solaris and Linux machines.
I thought that I need some kind of Windows Server for MPI on Windows so
that I didn't try building it on Windows. If I can build Open MPI on Cygwin,
I would prefer Cygwin because I have for all programs GNUmakefiles which
I would have to port to Windows Makefiles if I use MPI on Windows. If it isn't
possible to build Open MPI on Cygwin, I will try to build it directly on
Windows and I will port my GNUmakefiles in that case.

Kind regards

Siegmar


On Fri, 10 Dec 2010 09:16:53 +0100, Shiqing Fan<f...@hlrs.de>  wrote:

Hello Siegmar,

Do you have to use Open MPI that build with Cygwin? If not, you can
simply use CMake and Visual Studio to compile it. Please refer to the
README.WINDOWS file in the main directory.


Regards,
Shiqing

On 12/9/2010 4:24 PM, Siegmar Gross wrote:

Hi,

I know that you don't try to port Open Mpi to Cygwin at the moment but
perhaps you can give me a hint how to proceed. I tried to build
openmpi-1.5.1rc1 on Cygwin 1.5.25 with gcc-4 with the following options.

../openmpi-1.5.1rc1r24104/configure
--prefix=/usr/local/openmpi-1.5.1-gcc-4
CC=gcc-4 CPP=cpp-4 CXX=g++-4 CXXCPP=cpp-4 F77=gfortran-4 FC=gfortran-4
CFLAGS=-m32 CXXFLAGS=-m32 FFLAGS=-m32 FCFLAGS=-m32 CXXLDFLAGS=-m32
LDFLAGS=-m32 CPPFLAGS= C_INCL_PATH= C_INCLUDE_PATH= CPLUS_INCLUDE_PATH=
OBJC_INCLUDE_PATH= MPIHOME= --without-udapl --without-openib
--without-cs-fs --enable-mpi-f90 --with-mpi-f90-size=small
--enable-heterogeneous --enable-cxx-exceptions --enable-shared
--enable-orterun-prefix-by-default --with-threads=posix
--enable-mpi-threads --disable-progress-threads --disable-vt

"--disable-vt" was necessary to avoid some errors. I got the following
output in config.log.

## - ##
## Platform. ##
## - ##

hostname = eiger
uname -m = i686
uname -r = 1.5.25(0.156/4/2)
uname -s = CYGWIN_NT-5.1
uname -v = 2008-06-12 19:34

/usr/bin/uname -p = unknown
/bin/uname -X = unknown

/bin/arch  = i686
/usr/bin/arch -k   = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo  = unknown
/bin/machine   = unknown
/usr/bin/oslevel   = unknown
/bin/universe  = unknown
...


My configure-log-file contains the following two lines:

checking for architecture... i686
configure: WARNING: Unknown architecture ... proceeding anyway

In my opinion all other warnings in that file are unimportant because
I get them on Solaris and Linux as well. "make" breaks with some errors.

eiger openmpi-1.5.1-Cygwin.x86_gcc-4 56 grep -i error
log.make.Cygwin.x86_gcc-4 | more
...

CC error.lo
.../opal/mca/installdirs/windows/opal_installdirs_windows.c:72: error:
'HKEY' undeclared (first use in this function)
.../opal/mca/installdirs/windows/opal_installdirs_windows.c:72: error:
(Each undeclared identifier is reported only once
.../opal/mca/installdirs/windows/opal_installdirs_windows.c:72: error:
for each function it appears in.)
.../opal/mca/installdirs/windows/opal_installdirs_windows.c:72: error:
expected ';' before 'ompi_key'
.../opal/mca/installdirs/windows/opal_installdirs_windows.c:82: error:
'ERROR_SUCCESS' undeclared (first use in this function)
.../opal/mca/installdirs/windows/opal_installdirs_windows.c:82: error:
'HKEY_LOCAL_MACHINE' undeclared (first use in this function)
...


"opal_installdirs_windows.c" needs some header files which are not
available.

eiger openmpi-1.5.1-Cygwin.x86_gcc-4 79 find . -name constants.h
eiger openmpi-1.5.1-Cygwin.x86_gcc-4 80 find . -name installdirs.h
eiger openmpi-1.5.1-Cygwin.x86_gcc-4 81 find . -name opal_config.h
./opal/include/opal_config.h

What can I do, that the first two files will be created? Are they
necessary for Cygwin or is it only windows stuff? How can I avoid
the windows-subtree in Cygwin if it is not necessary? Thank you very
much for any help in advance.

Kind regards

Siegmar

___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users

Re: [OMPI users] Open MPI on Cygwin

[Shiqing Fan]

Hello Siegmar,

Do you have to use Open MPI that build with Cygwin? If not, you can 
simply use CMake and Visual Studio to compile it. Please refer to the 
README.WINDOWS file in the main directory.



Regards,
Shiqing

On 12/9/2010 4:24 PM, Siegmar Gross wrote:

Hi,

I know that you don't try to port Open Mpi to Cygwin at the moment but
perhaps you can give me a hint how to proceed. I tried to build
openmpi-1.5.1rc1 on Cygwin 1.5.25 with gcc-4 with the following options.

../openmpi-1.5.1rc1r24104/configure --prefix=/usr/local/openmpi-1.5.1-gcc-4
CC=gcc-4 CPP=cpp-4 CXX=g++-4 CXXCPP=cpp-4 F77=gfortran-4 FC=gfortran-4
CFLAGS=-m32 CXXFLAGS=-m32 FFLAGS=-m32 FCFLAGS=-m32 CXXLDFLAGS=-m32
LDFLAGS=-m32 CPPFLAGS= C_INCL_PATH= C_INCLUDE_PATH= CPLUS_INCLUDE_PATH=
OBJC_INCLUDE_PATH= MPIHOME= --without-udapl --without-openib
--without-cs-fs --enable-mpi-f90 --with-mpi-f90-size=small
--enable-heterogeneous --enable-cxx-exceptions --enable-shared
--enable-orterun-prefix-by-default --with-threads=posix
--enable-mpi-threads --disable-progress-threads --disable-vt

"--disable-vt" was necessary to avoid some errors. I got the following
output in config.log.

## - ##
## Platform. ##
## - ##

hostname = eiger
uname -m = i686
uname -r = 1.5.25(0.156/4/2)
uname -s = CYGWIN_NT-5.1
uname -v = 2008-06-12 19:34

/usr/bin/uname -p = unknown
/bin/uname -X = unknown

/bin/arch  = i686
/usr/bin/arch -k   = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo  = unknown
/bin/machine   = unknown
/usr/bin/oslevel   = unknown
/bin/universe  = unknown
...


My configure-log-file contains the following two lines:

checking for architecture... i686
configure: WARNING: Unknown architecture ... proceeding anyway

In my opinion all other warnings in that file are unimportant because
I get them on Solaris and Linux as well. "make" breaks with some errors.

eiger openmpi-1.5.1-Cygwin.x86_gcc-4 56 grep -i error
   log.make.Cygwin.x86_gcc-4 | more
...

   CC error.lo
.../opal/mca/installdirs/windows/opal_installdirs_windows.c:72: error:
   'HKEY' undeclared (first use in this function)
.../opal/mca/installdirs/windows/opal_installdirs_windows.c:72: error:
   (Each undeclared identifier is reported only once
.../opal/mca/installdirs/windows/opal_installdirs_windows.c:72: error:
   for each function it appears in.)
.../opal/mca/installdirs/windows/opal_installdirs_windows.c:72: error:
   expected ';' before 'ompi_key'
.../opal/mca/installdirs/windows/opal_installdirs_windows.c:82: error:
   'ERROR_SUCCESS' undeclared (first use in this function)
.../opal/mca/installdirs/windows/opal_installdirs_windows.c:82: error:
   'HKEY_LOCAL_MACHINE' undeclared (first use in this function)
...


"opal_installdirs_windows.c" needs some header files which are not
available.

eiger openmpi-1.5.1-Cygwin.x86_gcc-4 79 find . -name constants.h
eiger openmpi-1.5.1-Cygwin.x86_gcc-4 80 find . -name installdirs.h
eiger openmpi-1.5.1-Cygwin.x86_gcc-4 81 find . -name opal_config.h
./opal/include/opal_config.h

What can I do, that the first two files will be created? Are they
necessary for Cygwin or is it only windows stuff? How can I avoid
the windows-subtree in Cygwin if it is not necessary? Thank you very
much for any help in advance.

Kind regards

Siegmar

___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users

Re: [OMPI users] win: mpic++ -showme reports duplicate .libs

[Shiqing Fan]

Hi Hicham,

I'm afraid that I was wrong per last email. The trunk doesn't have this 
problem, it's only for 1.4 branch. I'll make a ticket to fix it. Thanks 
a lot.


Regards,
Shiqing

On 2010-12-1 11:16 PM, Hicham Mouline wrote:

-Original Message-
From: Shiqing Fan [mailto:f...@hlrs.de]
Sent: 01 December 2010 11:29
To: Open MPI Users
Cc: Hicham Mouline
Subject: Re: [OMPI users] win: mpic++ -showme reports duplicate .libs

Hi Hicham,

Thanks for noticing it. It's now been fixed on trunk.


Regards,
Shiqing

On 2010-12-1 10:02 AM, Hicham Mouline wrote:

Hello,


mpic++ -showme:link

/TP /EHsc /link /LIBPATH:"C:/Program Files (x86)/openmpi/lib"

libmpi.lib

libopen-pal.lib libopen-rte.lib libmpi_cxx.lib libmpi.lib libopen-

pal.lib

libopen-rte.lib advapi32.lib Ws2_32.lib shlwapi.lib

reports using the 4 mpi libs twice.

I've followed the cmake way in README.windows.

Is this intended or have I wronged somewhere?

rds,

That was fast. I'm glad these are sorted quickly.
This is used by FindMPI module in cmake which is hopefully being extended by
the maintainer after some emails, to work on windows as well.

regards,

___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
------
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

Re: [OMPI users] Problem with MPI_Comm_accept in a dynamic client/server application

[Shiqing Fan]

Hi Kalin,

Which version of Open MPI did you use? It seems that the ess component 
couldn't be selected. Could you please send me the output of ompi_info?



Regards,
Shiqing

On 2010-11-30 12:32 AM, Kalin Kanov wrote:

Hi Shiqing,

I must have missed your response among all the e-mails that get sent 
to the mailing list. Here are a little more details about the issues 
that I am having. My client/server programs seem to run sometimes, but 
then after a successful run I always seem to get the error that I 
included in my first post. The way that I run the programs is by 
running the server application first, which generates the port string, 
etc. I then proceed to run the client application with a new call to 
mpirun. After getting the errors that I e-mailed about I also tried to 
run ompi-clean, but the results are the following:


>ompi-clean
[Lazar:05984] [[INVALID],INVALID] ORTE_ERROR_LOG: Not found in file 
..\..\orte\r

untime\orte_init.c at line 125
-- 


It looks like orte_init failed for some reason; your parallel process is
likely to abort.  There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems.  This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
Open MPI developer):

  orte_ess_base_select failed
  --> Returned value Not found (-13) instead of ORTE_SUCCESS
-- 



Any help with this issue will be greatly appreciated.

Thank you,
Kalin


On 27.10.2010 г. 05:52, Shiqing Fan wrote:

  Hi Kalin,

Sorry for the late reply.

I checked the code and got confused. (I'm not and MPI expert) I'm just
wondering how to start the server and client in the same mpirun command
while the client needs a hand-input port name, which is given by the
server at runtime.

I found a similar program on the Internet (see attached), that works
well on my Windows. In this program, the generated port name will be
send among the processes by MPI_Send.


Regards,
Shiqing


On 2010-10-13 11:09 PM, Kalin Kanov wrote:

Hi there,

I am trying to create a client/server application with OpenMPI, which
has been installed on a Windows machine, by following the instruction
(with CMake) in the README.WINDOWS file in the OpenMPI distribution
(version 1.4.2). I have ran other test application that compile file
under the Visual Studio 2008 Command Prompt. However I get the
following errors on the server side when accepting a new client that
is trying to connect:

[Lazar:02716] [[47880,1],0] ORTE_ERROR_LOG: Not found in file
..\..\orte\mca\grp
comm\base\grpcomm_base_allgather.c at line 222
[Lazar:02716] [[47880,1],0] ORTE_ERROR_LOG: Not found in file
..\..\orte\mca\grp
comm\basic\grpcomm_basic_module.c at line 530
[Lazar:02716] [[47880,1],0] ORTE_ERROR_LOG: Not found in file
..\..\ompi\mca\dpm
\orte\dpm_orte.c at line 363
[Lazar:2716] *** An error occurred in MPI_Comm_accept
[Lazar:2716] *** on communicator MPI_COMM_WORLD
[Lazar:2716] *** MPI_ERR_INTERN: internal error
[Lazar:2716] *** MPI_ERRORS_ARE_FATAL (your MPI job will now abort)
-- 



mpirun has exited due to process rank 0 with PID 476 on
node Lazar exiting without calling "finalize". This may
have caused other processes in the application to be
terminated by signals sent by mpirun (as reported here).
-- 




The server and client code is attached. I have straggled with this
problem for quite a while, so please let me know what the issue might
be. I have looked at the archives and the FAQ, and the only thing
similar that I have found had to do with different version of OpenMPI
installed, but I only have one version, and I believe it is the one
being used.

Thank you,
Kalin


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
--
Shiqing Fanhttp://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
   Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email:f...@hlrs.de
70569 Stuttgart






--
----------
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

Re: [OMPI users] win: mpic++ -showme reports duplicate .libs

[Shiqing Fan]

Hi Hicham,

Thanks for noticing it. It's now been fixed on trunk.


Regards,
Shiqing

On 2010-12-1 10:02 AM, Hicham Mouline wrote:

Hello,


mpic++ -showme:link

/TP /EHsc /link /LIBPATH:"C:/Program Files (x86)/openmpi/lib" libmpi.lib
libopen-pal.lib libopen-rte.lib libmpi_cxx.lib libmpi.lib libopen-pal.lib
libopen-rte.lib advapi32.lib Ws2_32.lib shlwapi.lib

reports using the 4 mpi libs twice.

I've followed the cmake way in README.windows.

Is this intended or have I wronged somewhere?

rds,

___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
------
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

Re: [OMPI users] failure to launch MPMD program on win32 w 1.4.3

[Shiqing Fan]

Hi Hicham,

I've had this issue with -np 3 : -np 3 but not with -np 2: -np 2 or 
-np 1: -np 4 or other combinations.
I've also rebuilt from vs2008 with the libs advapi32.lib Ws2_32.lib 
shlwapi.lib as visible in the text file: 
share\openmpi\mpic++.exe-wrapper-data.txt, and the problem seemed to 
stop happening.


so now it is working.
Great! But I don't see the cause of the problem. If it's missing the 
linking libraries, the compiler should already complain at linking time.


I assume I will be able to do this on several windows boxes? Do they 
need to be all 32bit or 64bit or can I mix?
Yes, you can mix 32 and 64 bit, but you have to take care of the 
executables on each machine. And for running on multiple windows boxes, 
please refer to the windows readme file. In order to simplify the WMI 
configuration process, you may also use the small tool I attached for 
configure users (change the file extension to .exe):


Syntax: wmi-config <add|del> <domain1\username1> [<domain2\username2>] ...

For example:
   wmi-config add LOCAL_COMPUTER\user
   wmi-config add DOMAIN1\user1 DOMAIN2\user2
   wmi-config del DOMAIN1\user1


Regards,
Shiqing

--
----------
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart



wmi-config.ex_
Description: Binary data

Re: [OMPI users] failure to launch MPMD program on win32 w 1.4.3

[Shiqing Fan]

Hi,

I don't have boost on my Windows, so I made a very similar program just 
using MPI, and everything works just fine for me:


D:\work\OpenMPI\tests\CXX>more hello.cpp

# include "mpi.h"

using namespace std;

int main ( int argc, char *argv[] )
{
  int rank, size;

  MPI::Init ( argc, argv );
  size = MPI::COMM_WORLD.Get_size ( );
  rank = MPI::COMM_WORLD.Get_rank ( );

  printf("Process # %d \n", rank);

  MPI::Finalize ( );
  return 0;
}


D:\work\OpenMPI\tests\CXX>mpirun -np 3 hello.exe : -np 3 hello.exe
Process # 2
Process # 4
Process # 0
Process # 3
Process # 5
Process # 1


May be something related to boost?


Regards,
Shiqing

On 2010-11-30 12:05 PM, Hicham Mouline wrote:

Hello,
  
I have successfully run 
  
mpirun -np 3 .\test.exe
  
when I try MPMP
  
mpirun -np 3 .\test.exe : -np 3 .\test2.exe
  
where test and test2 are identical (just for a trial), I get this error:
  
[hostname:04960] [[47427,1],0]-[[47427,0],0] mca_oob_tcp_peer_send_blocking: send() failed: Unknown error (10057)

[hostname:04960] [[47427,1],0] routed:binomial: Connection to lifeline 
[[47427,0],0] lost

Granted this uses boost::mpi, but it worked for SPMD, and the source for the 
main function is trivial:

#include
#include

namespace mpi = boost::mpi;

int main(int argc, char* argv[])
{
   mpi::environment env(argc, argv);
   mpi::communicator world;

   std::cout<<  "Process #"<<  world.rank()<<  " says"<<  std::endl;
   return 0;
}


as far as I understand, there should be 1 world with 6 processes, ranking 0 1 2 
,  3 4 5

regards,

___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
------
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

Re: [OMPI users] win32 and linux64

[Shiqing Fan]

Hi Hicham,

Unfortunately, it's not possible to run over both windows and linux.


Regards,
Shiqing

On 2010-11-22 10:04 AM, Hicham Mouline wrote:

Hello

Is it possible to run openmpi application over 2 hosts win32 and linux64?

I ran this from the win box

mpirun -np 2 --hetero --host localhost,host2 .\Test1.exe

and the error was:
[:04288] This feature hasn't been implemented yet.
[:04288] Could not connect to namespace cimv2 on node host2.
Error code =-2147023174

Obviously I need to provide the linux binary as well, on host2.

Is this at all possible?

regards,

___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
--
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

Re: [OMPI users] Help passing filename arguments with spaces through mpirun on windows

[Shiqing Fan]

Hi,

You might also want to try "C:\\Program Files\\some dir".


Shiqing


On 2010-10-26 4:54 PM, Reuti wrote:

Am 26.10.2010 um 16:48 schrieb Bill McGrory:


I'm trying to pass a full path name as an argument to my executable
through mpirun on a windows platform. Some of the directories have
spaces embedded in the file name (e.g. C:\Program Files)

When I print out the argument list from the program, it has split the
argument into two (or more).

I have also enclosed the arguments in quotes, but that doesn't seem to
help.

I don't know for Windows, but sometimes it can help to use single and double 
quotes in combination:

'"C:\Program Files"'

-- Reuti



Is this a bug? or do I need to escape my argument list some way.

TIA

Bill

This is v1.4.2 compiled with MSVS using MS compilers, and I see it on XP
and Vista.
___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
----------
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

Re: [OMPI users] Problem with MPI_Comm_accept in a dynamic client/server application

[Shiqing Fan]

Hi Kalin,

These warning messages are harmless, some of the IPv6 feature is not yet 
supported on Windows, but it can still run with IPv4. If you want to get 
rid of these messages, just disable the IPv6 support in CMake.



Regards,
Shiqing

On 2010-10-14 6:46 PM, Kalin Kanov wrote:
Thank you for the quick response and I am looking forward to Shiqing's 
reply.


Additionally, I noticed that I get the following warnings whenever I 
run an OpenMPI application. I am not sure if this has anything to do 
with the error that I am getting for MPI_Comm_accept:


[Lazar:03288] mca_oob_tcp_create_listen: unable to disable v4-mapped 
addresses
[Lazar:00576] mca_oob_tcp_create_listen: unable to disable v4-mapped 
addresses
[Lazar:00576] mca_btl_tcp_create_listen: unable to disable v4-mapped 
addresses


Kalin

On 14.10.2010 г. 08:47, Jeff Squyres wrote:
Just FYI -- the main Windows Open MPI guy (Shiqing) is out for a 
little while.  He's really the best person to answer your question.  
I'm sure he'll reply when he can, but I just wanted to let you know 
that there may be some latency in his reply.



On Oct 13, 2010, at 5:09 PM, Kalin Kanov wrote:


Hi there,

I am trying to create a client/server application with OpenMPI, 
which has been installed on a Windows machine, by following the 
instruction (with CMake) in the README.WINDOWS file in the OpenMPI 
distribution (version 1.4.2). I have ran other test application that 
compile file under the Visual Studio 2008 Command Prompt. However I 
get the following errors on the server side when accepting a new 
client that is trying to connect:


[Lazar:02716] [[47880,1],0] ORTE_ERROR_LOG: Not found in file 
..\..\orte\mca\grp

comm\base\grpcomm_base_allgather.c at line 222
[Lazar:02716] [[47880,1],0] ORTE_ERROR_LOG: Not found in file 
..\..\orte\mca\grp

comm\basic\grpcomm_basic_module.c at line 530
[Lazar:02716] [[47880,1],0] ORTE_ERROR_LOG: Not found in file 
..\..\ompi\mca\dpm

\orte\dpm_orte.c at line 363
[Lazar:2716] *** An error occurred in MPI_Comm_accept
[Lazar:2716] *** on communicator MPI_COMM_WORLD
[Lazar:2716] *** MPI_ERR_INTERN: internal error
[Lazar:2716] *** MPI_ERRORS_ARE_FATAL (your MPI job will now abort)
-- 


mpirun has exited due to process rank 0 with PID 476 on
node Lazar exiting without calling "finalize". This may
have caused other processes in the application to be
terminated by signals sent by mpirun (as reported here).
-- 



The server and client code is attached. I have straggled with this 
problem for quite a while, so please let me know what the issue 
might be. I have looked at the archives and the FAQ, and the only 
thing similar that I have found had to do with different version of 
OpenMPI installed, but I only have one version, and I believe it is 
the one being used.


Thank you,
Kalin
___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users





___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
------
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

Re: [OMPI users] Problem with MPI_Comm_accept in a dynamic client/server application

[Shiqing Fan]

Hi Kalin,

Sorry for the late reply.

I checked the code and got confused. (I'm not and MPI expert)  I'm just 
wondering how to start the server and client in the same mpirun command 
while the client needs a hand-input port name, which is given by the 
server at runtime.


I found a similar program on the Internet (see attached), that works 
well on my Windows. In this program, the generated port name will be 
send among the processes by MPI_Send.



Regards,
Shiqing


On 2010-10-13 11:09 PM, Kalin Kanov wrote:

Hi there,

I am trying to create a client/server application with OpenMPI, which 
has been installed on a Windows machine, by following the instruction 
(with CMake) in the README.WINDOWS file in the OpenMPI distribution 
(version 1.4.2). I have ran other test application that compile file 
under the Visual Studio 2008 Command Prompt. However I get the 
following errors on the server side when accepting a new client that 
is trying to connect:


[Lazar:02716] [[47880,1],0] ORTE_ERROR_LOG: Not found in file 
..\..\orte\mca\grp

comm\base\grpcomm_base_allgather.c at line 222
[Lazar:02716] [[47880,1],0] ORTE_ERROR_LOG: Not found in file 
..\..\orte\mca\grp

comm\basic\grpcomm_basic_module.c at line 530
[Lazar:02716] [[47880,1],0] ORTE_ERROR_LOG: Not found in file 
..\..\ompi\mca\dpm

\orte\dpm_orte.c at line 363
[Lazar:2716] *** An error occurred in MPI_Comm_accept
[Lazar:2716] *** on communicator MPI_COMM_WORLD
[Lazar:2716] *** MPI_ERR_INTERN: internal error
[Lazar:2716] *** MPI_ERRORS_ARE_FATAL (your MPI job will now abort)
-- 


mpirun has exited due to process rank 0 with PID 476 on
node Lazar exiting without calling "finalize". This may
have caused other processes in the application to be
terminated by signals sent by mpirun (as reported here).
-- 



The server and client code is attached. I have straggled with this 
problem for quite a while, so please let me know what the issue might 
be. I have looked at the archives and the FAQ, and the only thing 
similar that I have found had to do with different version of OpenMPI 
installed, but I only have one version, and I believe it is the one 
being used.


Thank you,
Kalin


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
------
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

#include "mpi.h"
#include 
#include 
#include 
#include  /* Sleep */

/* This test checks to make sure that two MPI_Comm_connects to two different 
MPI ports
* match their corresponding MPI_Comm_accepts. The root process opens two MPI 
ports and
* sends the first port to process 1 and the second to process 2. Then the root 
process
* accepts a connection from the second port followed by the first port. 
* Processes 1 and 2 both connect back to the root but process 2 first sleeps 
for three 
* seconds to give process 1 time to attempt to connect to the root. The root 
should wait 
* until process 2 connects before accepting the connection from process 1.
*/
int main( int argc, char *argv[] )
{
int num_errors = 0;
int rank, size;
char port1[MPI_MAX_PORT_NAME];
char port2[MPI_MAX_PORT_NAME];
MPI_Status status;
MPI_Comm comm1, comm2;
int data = 0;

MPI_Init(, );
MPI_Comm_size(MPI_COMM_WORLD, );
MPI_Comm_rank(MPI_COMM_WORLD, );
if (size < 3)
{
printf("Three processes needed to run this test.\n");fflush(stdout);
MPI_Finalize();
return 0;
}

if (rank == 0)
{
printf("0: opening ports.\n");fflush(stdout);
MPI_Open_port(MPI_INFO_NULL, port1);
MPI_Open_port(MPI_INFO_NULL, port2);
printf("opened port1: <%s>\n", port1);
printf("opened port2: <%s>\n", port2);fflush(stdout);

MPI_Send(port1, MPI_MAX_PORT_NAME, MPI_CHAR, 1, 0, MPI_COMM_WORLD);
MPI_Send(port2, MPI_MAX_PORT_NAME, MPI_CHAR, 2, 0, MPI_COMM_WORLD);

printf("accepting port2.\n");fflush(stdout);
MPI_Comm_accept(port2, MPI_INFO_NULL, 0, MPI_COMM_SELF, );
printf("accepting port1.\n");fflush(stdout);
MPI_Comm_accept(port1, MPI_INFO_NULL, 0, MPI_COMM_SELF, );
MPI_Close_port(port1);
MPI_Close_port(port2);

printf("sending 1 to process 1.\n");fflush(stdout);
data = 1;
MPI_Send(, 1, MPI_INT, 0, 0, comm1);
printf("sending 2 to process 2.\n");fflush(stdout);
data = 2;
MPI_Send(, 1,

Re: [OMPI users] Building OpenMPI with DevStudio 2010

[Shiqing Fan]

 Hi Rick,

All the steps you've done were absolutely correct. The CMake output 
messages are not errors but the feature check results; if a real error 
occurs, CMake will just stop and pop up an error message window.


Unfortunately, 1.4.2 doesn't have the VS 2010 support yet, it will be 
added in the upcoming releases (1.4.3 and 1.5).  So the solution for the 
moment could be using the svn trunk or 1.5 branch. (1.4 branch will also 
have this very soon, see https://svn.open-mpi.org/trac/ompi/ticket/2521)



Regards,
Shiqing

On 2010-8-17 7:26 PM, Rick Hullinger wrote:

I am trying to get OpenMPI built on a windows machine using Dev
Studio, and I'm not having any luck. I'm hoping someone can point me
in the right direction.
Here are the details:

Environment: Windows 7, (64 bit OS, but I’m performing a 32 bit
build), Attempting to build under Dev Studio 2010
Steps:
1)  Download OpenMPI 1.4.2 to E:\\openmpi-1.4.2
2)  Run the windows installer for CMake 2.8.2
3) Open a visual studio command prompt and execute cmake-gui from the
command line
4) Set the “source code:” directory to: E:\\openmpi-1.4.2
   Set the “Build the binaries:” directory to E:\\MPIBuild
5) Hit the configure button:
Select Visual Studio 10 as the generator for this project
Leave the radio button on the default “use default native compilers”
Click Finish.
Output: see file “cmake.output.txt” for the full output (I've added
"**" to the start of each "error" line)

Note: it’s my understanding that all of the “not found” messages are
not necessarily errors, just CMake trying to figure out what is in
place and what is not…so maybe everything so far is fine.

7) Hit the configure button again. Output:
Check for working flex...
Skipping MPI F77 interface
looking for ccp...
looking for ccp...not found.
looking for ccp...
looking for ccp...not found.
Configuring done

8) Click Generate button. Output: “Generating done.”
9) Close CMake
10) Open MS DevStudio 2010, select “Open Project”, navigate to the
MPIBuild directory and select the “OpenMPI.sln” project
11) Select “Build solution”
12) Wait
13) Full output is attached in the file DevStudio.Output.txt, but right off the
bat, there are several of these messages:

..\..\openmpi-1.4.2\opal\event\WIN32-Code\win32.c(28): fatal error C1083: 
Cannot open include file: 'opal_config.h': No such file or directory

then we get into:

c1 : fatal error C1083: Cannot open source file:
'E:/Code/C++/ExternalLibs/openmpi-1.4.2/opal/event/compat': Permission
denied

  WIN32-Code

(note: compat is not a "source file" it's a directory? seems like an odd error)


c1 : fatal error C1083: Cannot open source file: 
'E:/Code/C++/ExternalLibs/openmpi-1.4.2/opal/event/WIN32-Code': Permission 
denied
  Generating Code...
-- Build started: Project: libopen-rte, Configuration: Debug Win32 --
-- Build started: Project: opal-restart, Configuration: Debug Win32 --
  opal-restart.c
  orted_comm.c
C:\Program Files (x86)\Microsoft Visual Studio 10.0\VC\include\stdint.h(73): 
warning C4005: 'INT16_MIN' : macro redefinition

..and a ton of the “macro redefinition” errors after that.

When all is said and done:
== Build: 1 succeeded, 13 failed, 0 up-to-date, 2 skipped ==

Anybody have any ideas?


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
----------
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

Re: [OMPI users] How to program with openmpi under MFC?

[Shiqing Fan]

 Hi,

Sorry for late answer.

I've checked your source code, and I didn't find anything wrong, 
everything works just fine with Open MPI trunk version. Could you tell 
me which version did you use, so that I can debug with your generated 
mpi libs?


By the way, I noticed that you put MPI_Init, MPI_Comm_rank, 
MPI_Comm_size, and MPI_Finalize in the function that will be triggered 
by the button press. This is only fine with the first button click, but 
not for the second click and so on. It's better to place them in the 
class initialization and finalization, so that they will only be 
executed once.



Regards,
Shiqing



On 2010-8-12 1:20 PM, lyb wrote:

Hi,
Some other information supply. the function breaks at the 3rd ASSERT. 
Send you the picture. thanks



Hello,
 the message is,
Unhandle exception at 0x7835b701 (mfc80ud.dll) : 0xC005: conflit 
while read 0xf78e9e00.


thanks.


 Hi,

I personally haven't try to program MPI with MFC, but in principle 
it should work. What kind of error did you get, was there any error 
message? Thanks.


Shiqing



On 2010-8-12 9:13 AM, lyb wrote:

Hi,

I have a MFC project, and need to add mpi functions in it,  and  
choose openmpi.

but I  searched all of mail list ,  not. find the answer.

And I try to call mpi functions under MFC, as follows,

int ompi_test(int *argc, char **argv)
{
int rank, size;

MPI_Init(argc, );
MPI_Comm_rank(MPI_COMM_WORLD, );
MPI_Comm_size(MPI_COMM_WORLD, );
printf("Hello, world, I am %d of %d\n", rank, size);
MPI_Barrier(MPI_COMM_WORLD);
MPI_Finalize();

return 0;
}
void CSchedulerDlg::OnBnClickedButton1()
{
ompi_test(NULL, NULL);
}

but break at MPI_Init(argc, );.

So what should I do?
Can anybody help me?

Thanks in advance.

Best Regards.



___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users











--
------
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

Re: [OMPI users] How to program with openmpi under MFC?

[Shiqing Fan]

 Hi,

I couldn't get any clue. Could you please provide me a small VS solution 
together with source file? It might be easier if I can simply check the 
callstacks. BTW: please send me off-list if the file is too big. Thanks.



Shiqing

On 2010-8-12 1:20 PM, lyb wrote:

Hi,
Some other information supply. the function breaks at the 3rd ASSERT. 
Send you the picture. thanks



Hello,
 the message is,
Unhandle exception at 0x7835b701 (mfc80ud.dll) : 0xC005: conflit 
while read 0xf78e9e00.


thanks.


 Hi,

I personally haven't try to program MPI with MFC, but in principle 
it should work. What kind of error did you get, was there any error 
message? Thanks.


Shiqing



On 2010-8-12 9:13 AM, lyb wrote:

Hi,

I have a MFC project, and need to add mpi functions in it,  and  
choose openmpi.

but I  searched all of mail list ,  not. find the answer.

And I try to call mpi functions under MFC, as follows,

int ompi_test(int *argc, char **argv)
{
int rank, size;

MPI_Init(argc, );
MPI_Comm_rank(MPI_COMM_WORLD, );
MPI_Comm_size(MPI_COMM_WORLD, );
printf("Hello, world, I am %d of %d\n", rank, size);
MPI_Barrier(MPI_COMM_WORLD);
MPI_Finalize();

return 0;
}
void CSchedulerDlg::OnBnClickedButton1()
{
ompi_test(NULL, NULL);
}

but break at MPI_Init(argc, );.

So what should I do?
Can anybody help me?

Thanks in advance.

Best Regards.



___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users











--
------
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

Re: [OMPI users] How to program with openmpi under MFC?

[Shiqing Fan]

 Hi,

I personally haven't try to program MPI with MFC, but in principle it 
should work. What kind of error did you get, was there any error 
message? Thanks.


Shiqing



On 2010-8-12 9:13 AM, lyb wrote:

Hi,

I have a MFC project, and need to add mpi functions in it,  and  
choose openmpi.

but I  searched all of mail list ,  not. find the answer.

And I try to call mpi functions under MFC, as follows,

int ompi_test(int *argc, char **argv)
{
int rank, size;

MPI_Init(argc, );
MPI_Comm_rank(MPI_COMM_WORLD, );
MPI_Comm_size(MPI_COMM_WORLD, );
printf("Hello, world, I am %d of %d\n", rank, size);
MPI_Barrier(MPI_COMM_WORLD);
MPI_Finalize();

return 0;
}
void CSchedulerDlg::OnBnClickedButton1()
{
ompi_test(NULL, NULL);
}

but break at MPI_Init(argc, );.

So what should I do?
Can anybody help me?

Thanks in advance.

Best Regards.



___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
------
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

Re: [OMPI users] minor glitch in 1.5-rc5 Windows build - has workaround

[Shiqing Fan]

 Hi Damien,

It is the user's responsibility to make sure the consistency of CMake 
and VS build types, but you can't change this setting from CMake in 
order to change it automatically in VS, it's a nature of using CMake.



Shiqing


On 2010-8-6 10:33 PM, Damien wrote:

 Hi all,

There's a small hiccup in building a Windows version of 1.5-rc5.  When 
you configure in the CMake GUI, you can ask for a Debug or Release 
project before you hit Generate.  If you ask for a Debug project, you 
can still change it to Release in Visual Studio, and it will build 
successfully.  BUT: the Install project will fail, because it tries to 
install libopen-pald.pdb (possibly others too, I didn't check).  It's 
a minor thing, only nuisance value.  If you set a Release project in 
CMake, everything works fine.


Damien

___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users




--
--
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

Re: [OMPI users] Error while compiling openMPI 1.4.2 in Cygwin 1.7.5-1. Library missing?

[Shiqing Fan]

dows.c:96: error: expected ‘;’ before ‘cbData’
opal_installdirs_windows.c:96: error: expected ‘)’ before ‘vData’
opal_installdirs_windows.c:97: error: expected ‘;’ before ‘cbData’
opal_installdirs_windows.c:97: error: expected ‘)’ before ‘vData’
opal_installdirs_windows.c:98: error: expected ‘;’ before ‘cbData’
opal_installdirs_windows.c:98: error: expected ‘)’ before ‘vData’
opal_installdirs_windows.c:99: error: expected ‘;’ before ‘cbData’
opal_installdirs_windows.c:99: error: expected ‘)’ before ‘vData’
opal_installdirs_windows.c:100: error: expected ‘;’ before ‘cbData’
opal_installdirs_windows.c:100: error: expected ‘)’ before ‘vData’
opal_installdirs_windows.c:101: error: expected ‘;’ before ‘cbData’
opal_installdirs_windows.c:101: error: expected ‘)’ before ‘vData’
make[2]: *** [opal_installdirs_windows.lo] Error 1
make[2]: Leaving directory
`/home/miguel/openmpi-1.4.2/opal/mca/installdirs/windows'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `/home/miguel/openmpi-1.4.2/opal'
make: *** [all-recursive] Error 1



--
Miguel


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
----------
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

Re: [OMPI users] Install OpenMPI on Win 7 machine

[Shiqing Fan]

Hi Alex,

Actually, I don't see the errors from your outputs, the headers that are 
not found won't stop you to build Open MPI, they are not errors, but 
only the checking results of your system for configuring Open MPI. What 
you need to do is just press configure button twice, and then press 
generate button on CMake-GUI, all the Visual Studio solution and project 
files will be generated. The next thing is to open the solution and 
build it.


Just let me know if you get any further questions.


Regards,
Shiqing


On 2010-7-12 7:35 PM, Alexandru Blidaru wrote:

Hey,

I installed a 90 day trial of Visual Studio 2008, and I am pretty sure 
I am getting the exact same thing. The log and the picture are 
attached just as last time. Any new ideas?


Regards,
Alex

On Mon, Jul 12, 2010 at 9:58 AM, Shiqing Fan <f...@hlrs.de 
<mailto:f...@hlrs.de>> wrote:



Hi Alex,

When the attachment is large, you can set the email directly to me
off the list.

For the problem you got, the reason is that you are using MinGW,
but not Microsoft C/C++ compiler. Is that possible for you to just
switch to Microsoft Visual Studio 2005 or 2008? There are still
many problems for supporting MinGW at moment.


Regards,
Shiqing


On 2010-7-12 3:48 PM, Alexandru Blidaru wrote:

Hi,

I am attaching all the output text resulted when configuring for
the first time. I am also attaching a picture of the of the main
area. My main purpose of installing OpenMPI is to set up a set of
"virtual cluster" on the Windows 7 machine, so I could
get accustomed with the different settings, and so I could try
some small programs, before being allowed to work on the actual
cluster.

Note, this is the first time I am using a mailing list, so if I
am not allowed attachments, please tell me. I tried to keep them
as small as possible.

Thanks for your help,
Alex

On Sat, Jul 10, 2010 at 7:16 AM, Shiqing Fan <f...@hlrs.de
<mailto:f...@hlrs.de>> wrote:

Hi Alex,

Building Open MPI using CMake is the recommended procedure,
you probably should stick with it, and it has been proved
working well on different Windows platforms. The other
building procedures are not well supported for some time now,
and they are deprecated.

For the problems that you got when building with CMake, it
might because some dependent headers/libraries are not
installed. Could you please provide the detail CMake error
output, so that I can help you fix it?


Regards,
Shiqing



On 2010-7-9 8:19 PM, Alexandru Blidaru wrote:

Hey guys,

This is my first time posting on an email list, so if I
don't follow certain protocols just tell me. Anyway, I am
working at a research lab as a High School Summer Intern,
and part of my project involves installing OpenMPI on a
Windows machine to run some applications in virtual
clusters. I tried following the first two methods from the
Windows ReadMe file, but none of them work. For the first
one, there are a bunch of header files cMake can't find. For
the second one, the cannot find the ompi-static.tgz tarball.
The set of files that I downloaded from OpenMPI can be found
here (tried both tars):
http://www.open-mpi.org/software/ompi/v1.4/ .

I noticed however that the ompi-static tarball can be found
in the Subversion that i obtained this
way:http://www.open-mpi.org/svn/mercurial.php . Can anyone
tell me what I might be doing wrong? Or maybe more detailed
steps? it's the first time I work with OpenMPI or any
similar technologies.

Thanks for your help,
Alex Blidaru


___
users mailing list
us...@open-mpi.org  <mailto:us...@open-mpi.org>
http://www.open-mpi.org/mailman/listinfo.cgi/users



-- 
--

Shiqing Fanhttp://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
   Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email:f...@hlrs.de  
<mailto:f...@hlrs.de>
70569 Stuttgart





-- 
--

Shiqing Fanhttp://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
   Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email:f...@hlrs.de  
<mailto:f...@hlrs.de>
70569 Stuttgart





--
----------
Shiqing Fan  http://www.hlrs.de/people/fan
High Per

Re: [OMPI users] Install OpenMPI on Win 7 machine

[Shiqing Fan]

Hi Alex,

When the attachment is large, you can set the email directly to me off 
the list.


For the problem you got, the reason is that you are using MinGW, but not 
Microsoft C/C++ compiler. Is that possible for you to just switch to 
Microsoft Visual Studio 2005 or 2008? There are still many problems for 
supporting MinGW at moment.



Regards,
Shiqing

On 2010-7-12 3:48 PM, Alexandru Blidaru wrote:

Hi,

I am attaching all the output text resulted when configuring for the 
first time. I am also attaching a picture of the of the main area. My 
main purpose of installing OpenMPI is to set up a set of "virtual 
cluster" on the Windows 7 machine, so I could get accustomed with the 
different settings, and so I could try some small programs, before 
being allowed to work on the actual cluster.


Note, this is the first time I am using a mailing list, so if I am not 
allowed attachments, please tell me. I tried to keep them as small as 
possible.


Thanks for your help,
Alex

On Sat, Jul 10, 2010 at 7:16 AM, Shiqing Fan <f...@hlrs.de 
<mailto:f...@hlrs.de>> wrote:


Hi Alex,

Building Open MPI using CMake is the recommended procedure, you
probably should stick with it, and it has been proved working well
on different Windows platforms. The other building procedures are
not well supported for some time now, and they are deprecated.

For the problems that you got when building with CMake, it might
because some dependent headers/libraries are not installed. Could
you please provide the detail CMake error output, so that I can
help you fix it?


Regards,
Shiqing



On 2010-7-9 8:19 PM, Alexandru Blidaru wrote:

Hey guys,

This is my first time posting on an email list, so if I don't
follow certain protocols just tell me. Anyway, I am working at a
research lab as a High School Summer Intern, and part of my
project involves installing OpenMPI on a Windows machine to run
some applications in virtual clusters. I tried following the
first two methods from the Windows ReadMe file, but none of them
work. For the first one, there are a bunch of header files cMake
can't find. For the second one, the cannot find the
ompi-static.tgz tarball. The set of files that I downloaded from
OpenMPI can be found here (tried both tars):
http://www.open-mpi.org/software/ompi/v1.4/ .

I noticed however that the ompi-static tarball can be found in
the Subversion that i obtained this
way:http://www.open-mpi.org/svn/mercurial.php . Can anyone tell
me what I might be doing wrong? Or maybe more detailed steps?
it's the first time I work with OpenMPI or any similar technologies.

Thanks for your help,
Alex Blidaru


___
users mailing list
us...@open-mpi.org  <mailto:us...@open-mpi.org>
http://www.open-mpi.org/mailman/listinfo.cgi/users



-- 
--

Shiqing Fanhttp://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
   Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email:f...@hlrs.de  
<mailto:f...@hlrs.de>
70569 Stuttgart





--
----------
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

Re: [OMPI users] Install OpenMPI on Win 7 machine

[Shiqing Fan]

 Hi Alex,

Building Open MPI using CMake is the recommended procedure, you probably 
should stick with it, and it has been proved working well on different 
Windows platforms. The other building procedures are not well supported 
for some time now, and they are deprecated.


For the problems that you got when building with CMake, it might because 
some dependent headers/libraries are not installed. Could you please 
provide the detail CMake error output, so that I can help you fix it?



Regards,
Shiqing


On 2010-7-9 8:19 PM, Alexandru Blidaru wrote:

Hey guys,

This is my first time posting on an email list, so if I don't follow 
certain protocols just tell me. Anyway, I am working at a research lab 
as a High School Summer Intern, and part of my project involves 
installing OpenMPI on a Windows machine to run some applications in 
virtual clusters. I tried following the first two methods from the 
Windows ReadMe file, but none of them work. For the first one, there 
are a bunch of header files cMake can't find. For the second one, the 
cannot find the ompi-static.tgz tarball. The set of files that I 
downloaded from OpenMPI can be found here (tried both tars): 
http://www.open-mpi.org/software/ompi/v1.4/ .


I noticed however that the ompi-static tarball can be found in the 
Subversion that i obtained this 
way:http://www.open-mpi.org/svn/mercurial.php . Can anyone tell me 
what I might be doing wrong? Or maybe more detailed steps? it's the 
first time I work with OpenMPI or any similar technologies.


Thanks for your help,
Alex Blidaru


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
--
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

Re: [OMPI users] ompi-ps failure on WinXP

[Shiqing Fan]

Hi Stephan,

I haven't tried to generate NMake Makefile to build Open MPI on Window, 
the original purpose of using CMake was to generate Visual Studio 
solution files. But if you can provide more information, e.g. error 
messages, maybe I can figure out the problem for NMake.


Thanks,
Shiqing

On 2010-6-21 7:43 PM, Stephan Hackstedt wrote:
Update: NMake Makefile creation works with VC8, but using nmake to 
install openmpi creates an error...

i will try to find a way to build it.

Stephan

Stephan

2010/6/21 Stephan Hackstedt <stephan.hackst...@googlemail.com 
<mailto:stephan.hackst...@googlemail.com>>


Hi Shiqing,

i just checked out the code, but i am unable to create the nmake
makefile with cmake.
cmake tells me, it is unable to define 8-bit types.
i also noticed, that for windows, the 1.4.2 release works with
cmake, version above this making cmake to fail.
i am using the VC10 compiler, but as an alternative i can use VC8.
maybe it's worth a try.
if i can make it, i will report :)

Stephan

    2010/6/21 Shiqing Fan <f...@hlrs.de <mailto:f...@hlrs.de>>


Hi Stephan,

For ompi-server test, you could probably refer to this Open
MPI doc: http://www.open-mpi.org/doc/v1.4/man1/ompi-server.1.php .

Possible tests would be "ompi-server -r -", "ompi-server -r
+", "ompi-server -r file", or you can also write a MPI program
using MPI_Lookup_name/MPI_Publish_name functions.


Regards,
Shiqing





On 2010-6-20 11:14 AM, Stephan Hackstedt wrote:

Hello,

i found no solution for this until yet.
Is there anyone who has a running ompi-server.exe on Windows XP?
If so, it would be great to tell me what i can do, to make
ompi-server-exe running properly on WinXP.

Stephan


2010/6/16 Stephan Hackstedt <stephan.hackst...@googlemail.com
<mailto:stephan.hackst...@googlemail.com>>

Hello,

i am using Open-MPI on a WinXP Professional VirtualBox
machine.
Open-MPI is build with cmake and nmake.
When i'm trying to use the ompi-ps tool i got the
following failure (the same with ompi-server, ompi-clean
and orted):




###

D:\project\cluster_ompi>ompi-ps.exe
[vbox:03552] [[INVALID],INVALID] ORTE_ERROR_LOG: Not
found in file D:\project\op
enmpi_1_4_2_src\orte\runtime\orte_init.c at line 125

--
It looks like orte_init failed for some reason; your
parallel process is
likely to abort.  There are many reasons that a parallel
process can
fail during orte_init; some of which are due to
configuration or
environment problems.  This failure appears to be an
internal failure;
here's some additional information (which may only be
relevant to an
Open MPI developer):

  orte_ess_base_select failed
  --> Returned value Not found (-13) instead of ORTE_SUCCESS

--






on the other way, when use mpirun to start the tools like
"mpirun ompi-ps.exe" there is no error.
It this normal, or maybe is there an fix to solve my problem?
I'm would be nice if somebody has a solution for this.


Stephan



___
users mailing list
us...@open-mpi.org <mailto:us...@open-mpi.org>
http://www.open-mpi.org/mailman/listinfo.cgi/users



-- 
--

Shiqing Fanhttp://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
   Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email:f...@hlrs.de  
<mailto:f...@hlrs.de>
70569 Stuttgart
       







--
--
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

Re: [OMPI users] ompi-ps failure on WinXP

[Shiqing Fan]

Hi Stephan,

For ompi-server test, you could probably refer to this Open MPI doc: 
http://www.open-mpi.org/doc/v1.4/man1/ompi-server.1.php .


Possible tests would be "ompi-server -r -", "ompi-server -r +", 
"ompi-server -r file", or you can also write a MPI program using 
MPI_Lookup_name/MPI_Publish_name functions.



Regards,
Shiqing




On 2010-6-20 11:14 AM, Stephan Hackstedt wrote:

Hello,

i found no solution for this until yet.
Is there anyone who has a running ompi-server.exe on Windows XP?
If so, it would be great to tell me what i can do, to make 
ompi-server-exe running properly on WinXP.


Stephan


2010/6/16 Stephan Hackstedt <stephan.hackst...@googlemail.com 
<mailto:stephan.hackst...@googlemail.com>>


Hello,

i am using Open-MPI on a WinXP Professional VirtualBox machine.
Open-MPI is build with cmake and nmake.
When i'm trying to use the ompi-ps tool i got the following
failure (the same with ompi-server, ompi-clean and orted):



###

D:\project\cluster_ompi>ompi-ps.exe
[vbox:03552] [[INVALID],INVALID] ORTE_ERROR_LOG: Not found in file
D:\project\op
enmpi_1_4_2_src\orte\runtime\orte_init.c at line 125
--
It looks like orte_init failed for some reason; your parallel
process is
likely to abort.  There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems.  This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
Open MPI developer):

  orte_ess_base_select failed
  --> Returned value Not found (-13) instead of ORTE_SUCCESS
--





on the other way, when use mpirun to start the tools like "mpirun
ompi-ps.exe" there is no error.
It this normal, or maybe is there an fix to solve my problem?
I'm would be nice if somebody has a solution for this.


Stephan



___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
----------
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

Re: [OMPI users] ompi-ps failure on WinXP

[Shiqing Fan]

Hi Stephan,

ompi-ps is now fixed in trunk (r23286), it should work again with this 
fix, could you please update and try it again?



Thanks,
Shiqing

On 2010-6-16 6:55 PM, Stephan Hackstedt wrote:

Hello,

i am using Open-MPI on a WinXP Professional VirtualBox machine.
Open-MPI is build with cmake and nmake.
When i'm trying to use the ompi-ps tool i got the following failure 
(the same with ompi-server, ompi-clean and orted):




###

D:\project\cluster_ompi>ompi-ps.exe
[vbox:03552] [[INVALID],INVALID] ORTE_ERROR_LOG: Not found in file 
D:\project\op

enmpi_1_4_2_src\orte\runtime\orte_init.c at line 125
--
It looks like orte_init failed for some reason; your parallel process is
likely to abort.  There are many reasons that a parallel process can
fail during orte_init; some of which are due to configuration or
environment problems.  This failure appears to be an internal failure;
here's some additional information (which may only be relevant to an
Open MPI developer):

  orte_ess_base_select failed
  --> Returned value Not found (-13) instead of ORTE_SUCCESS
--





on the other way, when use mpirun to start the tools like "mpirun 
ompi-ps.exe" there is no error.

It this normal, or maybe is there an fix to solve my problem?
I'm would be nice if somebody has a solution for this.


Stephan


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
----------
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

Re: [OMPI users] Process doesn't exit on remote machine when using hostfile

[Shiqing Fan]

Hi,


The hostfile seems working for me on my Windows XP machines, but it 
should be the same on Windows 7. The problem you had looks to me more 
like a synchronization problem. Could you send me your test program?



Regards,
Shiqing

On 2010-5-25 11:41 AM, Rajnesh Jindel wrote:
disabled the firewall and using admin account so security isnt the 
issue here. like I said this problem only occurs when using a 
hostfile,  if I actually specify the hostname on the commandfline it 
works fine
On 25 May 2010 09:08, Shiqing Fan <f...@hlrs.de <mailto:f...@hlrs.de>> 
wrote:


Hi,

What's the firewall setting on the remote node? Could you try to
add an exception for the application, or turn off the firewall
completely?

Regards,
Shiqing




On 2010-5-24 4:44 PM, Rajnesh Jindel wrote:

When I specify the hosts separately on the commandline, as
follows, the process completes as expected.
mpirun -np 8 -host remotehost,localhost myapp
Output appears for the localhost and a textfile is created on the
remotehost

However when I use a hostfile the remote processes never
complete. I can see the output from the local processes and by
remote login I can see that that processes are being started on
the remote machine but never complete.

The is a simple reduce example using boost.mpi (v1.43) I'm using
windows 7 x64 pro on both machines and openmpi 1.4.2 the hostfile
and athe app are in the same locaion on both machines.

Any idea why this is happening?

Raj


___
users mailing list
us...@open-mpi.org <mailto:us...@open-mpi.org>
http://www.open-mpi.org/mailman/listinfo.cgi/users



-- 
--

Shiqing Fanhttp://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
   Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email:f...@hlrs.de  
<mailto:f...@hlrs.de>
70569 Stuttgart
 






--
----------
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

Re: [OMPI users] heterogeneous cluster setup

[Shiqing Fan]

Hi,

Unfortunately, we don't have such support at moment.


Regards,
Shiqing


On 2010-6-1 8:49 PM, Jeff Squyres wrote:

Shiqing --

Do we support mixed Windows + Linux jobs?


On Jun 1, 2010, at 1:17 PM, Hicham Lahlou wrote:

   

Hi all,

I have a question regarding the support for heterogeneous systems. Using the 
latest version of OpenMPI, is it possible to have a single MPI application 
running across a cluster of mixed operating systems, say for example Windows 
and Linux?

Thanks,

Hicham

___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users

 


   



--
--
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

Re: [OMPI users] Process doesn't exit on remote machine when using hostfile

[Shiqing Fan]

Hi,

Sorry for the late reply.

It seems something is still missing on Windows for supporting hostfiles, 
I'll fix it ASAP.


Regards,
Shiqing


On 2010-5-25 11:41 AM, Rajnesh Jindel wrote:
disabled the firewall and using admin account so security isnt the 
issue here. like I said this problem only occurs when using a 
hostfile,  if I actually specify the hostname on the commandfline it 
works fine
On 25 May 2010 09:08, Shiqing Fan <f...@hlrs.de <mailto:f...@hlrs.de>> 
wrote:


Hi,

What's the firewall setting on the remote node? Could you try to
add an exception for the application, or turn off the firewall
completely?

Regards,
Shiqing




On 2010-5-24 4:44 PM, Rajnesh Jindel wrote:

When I specify the hosts separately on the commandline, as
follows, the process completes as expected.
mpirun -np 8 -host remotehost,localhost myapp
Output appears for the localhost and a textfile is created on the
remotehost

However when I use a hostfile the remote processes never
complete. I can see the output from the local processes and by
remote login I can see that that processes are being started on
the remote machine but never complete.

The is a simple reduce example using boost.mpi (v1.43) I'm using
windows 7 x64 pro on both machines and openmpi 1.4.2 the hostfile
and athe app are in the same locaion on both machines.

Any idea why this is happening?

Raj


___
users mailing list
us...@open-mpi.org <mailto:us...@open-mpi.org>
http://www.open-mpi.org/mailman/listinfo.cgi/users



-- 
--

Shiqing Fanhttp://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
   Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email:f...@hlrs.de  
<mailto:f...@hlrs.de>
70569 Stuttgart
 






--
----------
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart

Re: [OMPI users] Process doesn't exit on remote machine when using hostfile

[Shiqing Fan]

Hi,

What's the firewall setting on the remote node? Could you try to add an 
exception for the application, or turn off the firewall completely?


Regards,
Shiqing



On 2010-5-24 4:44 PM, Rajnesh Jindel wrote:
When I specify the hosts separately on the commandline, as follows, 
the process completes as expected.

mpirun -np 8 -host remotehost,localhost myapp
Output appears for the localhost and a textfile is created on the 
remotehost


However when I use a hostfile the remote processes never complete. I 
can see the output from the local processes and by remote login I can 
see that that processes are being started on the remote machine but 
never complete.


The is a simple reduce example using boost.mpi (v1.43) I'm using 
windows 7 x64 pro on both machines and openmpi 1.4.2 the hostfile and 
athe app are in the same locaion on both machines.


Any idea why this is happening?

Raj


___
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users



--
--
Shiqing Fan  http://www.hlrs.de/people/fan
High Performance Computing   Tel.: +49 711 685 87234
  Center Stuttgart (HLRS)Fax.: +49 711 685 65832
Address:Allmandring 30   email: f...@hlrs.de
70569 Stuttgart