[votca] Re: Installing Votca in linux

2012-02-17 Thread rp
, googlesource.com (use --insecure to connect insecurely) If have added a fix in the buildutil, please update. Christoph Thanks All Rakhee On Sun, Dec 18, 2011 at 11:09 AM, Christoph Junghans jungh...@votca.org wrote: Am 17. Dezember 2011 17:56 schrieb rp rakheep

[votca] Coarse grained interactions

2012-02-08 Thread rp
Dear Votca Users, I have my atomistic simulations done in using AMBER MD suite. In the Votca manual this mention on use of GROMACS trajectory and input file. I want derive the non bonded potentials using iterative Boltzmann inversion and bonded interactions using potential of mean force of the CG

[votca] Re: Installing Votca in linux

2011-12-17 Thread rp
/local/lib/libfftw3.a - not found CMake Error at CMakeModules/FindFFTW3.cmake:43 (message): Could not find fftw_plan_r2r_1d in /usr/local/lib/libfftw3.a, take a look at the error message in /home/rp/src/tools/CMakeFiles/CMakeError.log to find out what was going wrong. If you don't have pkg

[votca] Re: Installing Votca in linux

2011-12-17 Thread rp
are installed. Determining if the function pthread_create exists in the pthreads failed with the following output: Change Dir: /home/rp/src/tools/CMakeFiles/CMakeTmp Run Build Command:/usr/bin/make cmTryCompileExec/fast /usr/bin/make -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles

[votca] Re: Installing Votca in linux

2011-12-15 Thread rp
build.sh ./build.sh --prefix ${prefix} tools csg maybe you can add gromacs on last line, like this ./build.sh --prefix ${prefix} gromacs tools csg regards Marc Universidad de la Republica Uruguay On Thu, Nov 17, 2011 at 7:01 PM, rp rakheep...@gmail.com wrote: Yes I have seen

[votca] Re: Installing Votca in linux

2011-12-15 Thread rp
this in Ubuntu .I read the Votca installation page and this says Ubuntu is still in development . I am sorry if my question is not clear. I appreciate your help Thanks On Dec 15, 7:50 pm, Christoph Junghans jungh...@votca.org wrote: Hi rp, which version of cmake is it? $cmake --version Please add

[votca] Re: Installing Votca in linux

2011-12-15 Thread rp
: $ ./build.sh --debug -prefix ${prefix} --latest tools csg Am 15. Dezember 2011 19:46 schrieb rp rakheep...@gmail.com: This is cmake 2.8.6 and I am installing votca in Ubuntu11.10. After installing cmake there is no error . Where should I add the debug option , please explain I am

[votca] Re: Installing Votca in linux

2011-12-15 Thread rp
boost and it's dev  package or use our internal replacement set -DEXTERNAL_BOOST=OFF -- Configuring incomplete, errors occurred! Can someone tell me how can I turn DEEXTERNAL_BOOST=OFF Thanks On Dec 15, 10:35 pm, rp rakheep...@gmail.com wrote: This is what I get after the command line + shift

[votca] Installing Votca in linux

2011-11-17 Thread rp
Can you send to instructions to install votca in linux. Thanks for help -- You received this message because you are subscribed to the Google Groups votca group. To post to this group, send email to votca@googlegroups.com. To unsubscribe from this group, send email to

[votca] Re: Installing Votca in linux

2011-11-17 Thread rp
Yes I have seen this installation page . I downloaded Votca and would like to know how should I go about installing thisin a linux box or in linux cluster. Thanks On Nov 17, 3:38 pm, Konstantin Koschke konstantin.kosc...@gmail.com wrote: On Thu, Nov 17, 2011 at 8:22 PM, rp rakheep...@gmail.com