Below is the CMakeError.log file , as mentioned using -DWITH_FFTW=NO will lead to reduced functionality , will this option disable certain tools.Again if I try -DFFTW3_LIBRARY='/path/to/libfftw3.so' with ./build.sh , do I need to replace /path/to with the place where fftw library files are installed.
Determining if the function pthread_create exists in the pthreads failed with the following output: Change Dir: /home/rp/src/tools/CMakeFiles/CMakeTmp Run Build Command:/usr/bin/make "cmTryCompileExec/fast" /usr/bin/make -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/ cmTryCompileExec.dir/build make[1]: Entering directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' /usr/local/bin/cmake -E cmake_progress_report /home/rp/src/tools/ CMakeFiles/CMakeTmp/CMakeFiles 1 Building C object CMakeFiles/cmTryCompileExec.dir/ CheckFunctionExists.c.o /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/local/share/ cmake-2.8/Modules/CheckFunctionExists.c Linking C executable cmTryCompileExec /usr/local/bin/cmake -E cmake_link_script CMakeFiles/ cmTryCompileExec.dir/link.txt --verbose=1 /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -o cmTryCompileExec - rdynamic -lpthreads /usr/bin/ld: cannot find -lpthreads collect2: ld returned 1 exit status make[1]: Leaving directory `/home/rakhee/src/tools/CMakeFiles/ CMakeTmp' make[1]: *** [cmTryCompileExec] Error 1 make: *** [cmTryCompileExec/fast] Error 2 Determining if the function pthread_create exists in the pthreads failed with the following output: Change Dir: /home/rakhee/src/tools/CMakeFiles/CMakeTmp Run Build Command:/usr/bin/make "cmTryCompileExec/fast" /usr/bin/make -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/ cmTryCompileExec.dir/build make[1]: Entering directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' /usr/local/bin/cmake -E cmake_progress_report /home/rakhee/src/tools/ CMakeFiles/CMakeTmp/CMakeFiles 1 Building C object CMakeFiles/cmTryCompileExec.dir/ CheckFunctionExists.c.o /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/local/share/ cmake-2.8/Modules/CheckFunctionExists.c Linking C executable cmTryCompileExec /usr/local/bin/cmake -E cmake_link_script CMakeFiles/ cmTryCompileExec.dir/link.txt --verbose=1 /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -o cmTryCompileExec - rdynamic -lpthreads /usr/bin/ld: cannot find -lpthreads collect2: ld returned 1 exit status make[1]: *** [cmTryCompileExec] Error 1 make[1]: Leaving directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' make: *** [cmTryCompileExec/fast] Error 2 Determining if the function pthread_create exists in the pthreads failed with the following output: Change Dir: /home/rp/src/tools/CMakeFiles/CMakeTmp Run Build Command:/usr/bin/make "cmTryCompileExec/fast" /usr/bin/make -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/ cmTryCompileExec.dir/build make[1]: Entering directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' /usr/local/bin/cmake -E cmake_progress_report /home/rakhee/src/tools/ CMakeFiles/CMakeTmp/CMakeFiles 1 Building C object CMakeFiles/cmTryCompileExec.dir/ CheckFunctionExists.c.o /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/local/share/ cmake-2.8/Modules/CheckFunctionExists.c Linking C executable cmTryCompileExec /usr/local/bin/cmake -E cmake_link_script CMakeFiles/ cmTryCompileExec.dir/link.txt --verbose=1 /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -o cmTryCompileExec - rdynamic -lpthreads /usr/bin/ld: cannot find -lpthreads collect2: ld returned 1 exit status make[1]: *** [cmTryCompileExec] Error 1 make[1]: Leaving directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' make: *** [cmTryCompileExec/fast] Error 2 Determining if the function pthread_create exists in the pthreads failed with the following output: Change Dir: /home/rakhee/src/tools/CMakeFiles/CMakeTmp Run Build Command:/usr/bin/make "cmTryCompileExec/fast" /usr/bin/make -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/ cmTryCompileExec.dir/build make[1]: Entering directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' /usr/local/bin/cmake -E cmake_progress_report /home/rakhee/src/tools/ CMakeFiles/CMakeTmp/CMakeFiles 1 Building C object CMakeFiles/cmTryCompileExec.dir/ CheckFunctionExists.c.o /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/local/share/ cmake-2.8/Modules/CheckFunctionExists.c Linking C executable cmTryCompileExec /usr/local/bin/cmake -E cmake_link_script CMakeFiles/ cmTryCompileExec.dir/link.txt --verbose=1 /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -o cmTryCompileExec - rdynamic -lpthreads /usr/bin/ld: cannot find -lpthreads collect2: ld returned 1 exit status make[1]: *** [cmTryCompileExec] Error 1 make[1]: Leaving directory `/home/rakhee/src/tools/CMakeFiles/ CMakeTmp' make: *** [cmTryCompileExec/fast] Error 2 Determining if the function pthread_create exists in the pthreads failed with the following output: Change Dir: /home/rp/src/tools/CMakeFiles/CMakeTmp Run Build Command:/usr/bin/make "cmTryCompileExec/fast" /usr/bin/make -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/ cmTryCompileExec.dir/build make[1]: Entering directory `/home/rakhee/src/tools/CMakeFiles/ CMakeTmp' /usr/local/bin/cmake -E cmake_progress_report /home/rakhee/src/tools/ CMakeFiles/CMakeTmp/CMakeFiles 1 Building C object CMakeFiles/cmTryCompileExec.dir/ CheckFunctionExists.c.o /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/local/share/ cmake-2.8/Modules/CheckFunctionExists.c Linking C executable cmTryCompileExec /usr/local/bin/cmake -E cmake_link_script CMakeFiles/ cmTryCompileExec.dir/link.txt --verbose=1 /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -o cmTryCompileExec - rdynamic -lpthreads /usr/bin/ld: cannot find -lpthreads collect2: ld returned 1 exit status make[1]: *** [cmTryCompileExec] Error 1 make[1]: Leaving directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' make: *** [cmTryCompileExec/fast] Error 2 Determining if the function pthread_create exists in the pthreads failed with the following output: Change Dir: /home/rakhee/src/tools/CMakeFiles/CMakeTmp Run Build Command:/usr/bin/make "cmTryCompileExec/fast" /usr/bin/make -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/ cmTryCompileExec.dir/build make[1]: Entering directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' /usr/local/bin/cmake -E cmake_progress_report /home/rakhee/src/tools/ CMakeFiles/CMakeTmp/CMakeFiles 1 Building C object CMakeFiles/cmTryCompileExec.dir/ CheckFunctionExists.c.o /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/local/share/ cmake-2.8/Modules/CheckFunctionExists.c Linking C executable cmTryCompileExec /usr/local/bin/cmake -E cmake_link_script CMakeFiles/ cmTryCompileExec.dir/link.txt --verbose=1 /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -o cmTryCompileExec - rdynamic -lpthreads /usr/bin/ld: cannot find -lpthreads collect2: ld returned 1 exit status make[1]: *** [cmTryCompileExec] Error 1 make[1]: Leaving directory `/home/rakhee/src/tools/CMakeFiles/ CMakeTmp' make: *** [cmTryCompileExec/fast] Error 2 Determining if the function fftw_plan_r2r_1d exists in the /usr/local/ lib/libfftw3.a failed with the following output: Change Dir: /home/rakhee/src/tools/CMakeFiles/CMakeTmp Run Build Command:/usr/bin/make "cmTryCompileExec/fast" /usr/bin/make -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/ cmTryCompileExec.dir/build make[1]: Entering directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' /usr/local/bin/cmake -E cmake_progress_report /home/rakhee/src/tools/ CMakeFiles/CMakeTmp/CMakeFiles 1 Building C object CMakeFiles/cmTryCompileExec.dir/ CheckFunctionExists.c.o /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=fftw_plan_r2r_1d -o CMakeFiles/cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/ local/share/cmake-2.8/Modules/CheckFunctionExists.c Linking C executable cmTryCompileExec /usr/local/bin/cmake -E cmake_link_script CMakeFiles/ cmTryCompileExec.dir/link.txt --verbose=1 /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=fftw_plan_r2r_1d CMakeFiles/cmTryCompileExec.dir/CheckFunctionExists.c.o -o cmTryCompileExec -rdynamic /usr/local/lib/libfftw3.a /usr/local/lib/libfftw3.a(mapflags.o): In function `fftw_mapflags': mapflags.c:(.text+0x440): undefined reference to `log' /usr/local/lib/libfftw3.a(trig.o): In function `real_cexp': trig.c:(.text+0x205): undefined reference to `sincos' collect2: ld returned 1 exit status make[1]: *** [cmTryCompileExec] Error 1 make[1]: Leaving directory `/home/rakhee/src/tools/CMakeFiles/ CMakeTmp' make: *** [cmTryCompileExec/fast] Error 2 Determining if the function pthread_create exists in the pthreads failed with the following output: Change Dir: /home/rakhee/src/tools/CMakeFiles/CMakeTmp Run Build Command:/usr/bin/make "cmTryCompileExec/fast" /usr/bin/make -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/ cmTryCompileExec.dir/build make[1]: Entering directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' /usr/local/bin/cmake -E cmake_progress_report /home/rakhee/src/tools/ CMakeFiles/CMakeTmp/CMakeFiles 1 Building C object CMakeFiles/cmTryCompileExec.dir/ CheckFunctionExists.c.o /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/local/share/ cmake-2.8/Modules/CheckFunctionExists.c Linking C executable cmTryCompileExec /usr/local/bin/cmake -E cmake_link_script CMakeFiles/ cmTryCompileExec.dir/link.txt --verbose=1 /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -o cmTryCompileExec - rdynamic -lpthreads /usr/bin/ld: cannot find -lpthreads collect2: ld returned 1 exit status make[1]: *** [cmTryCompileExec] Error 1 make[1]: Leaving directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' make: *** [cmTryCompileExec/fast] Error 2 Determining if the function fftw_plan_r2r_1d exists in the /usr/local/ lib/libfftw3.a failed with the following output: Change Dir: /home/rp/src/tools/CMakeFiles/CMakeTmp Run Build Command:/usr/bin/make "cmTryCompileExec/fast" /usr/bin/make -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/ cmTryCompileExec.dir/build make[1]: Entering directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' /usr/local/bin/cmake -E cmake_progress_report /home/rakhee/src/tools/ CMakeFiles/CMakeTmp/CMakeFiles 1 Building C object CMakeFiles/cmTryCompileExec.dir/ CheckFunctionExists.c.o /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=fftw_plan_r2r_1d -o CMakeFiles/cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/ local/share/cmake-2.8/Modules/CheckFunctionExists.c Linking C executable cmTryCompileExec /usr/local/bin/cmake -E cmake_link_script CMakeFiles/ cmTryCompileExec.dir/link.txt --verbose=1 /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=fftw_plan_r2r_1d CMakeFiles/cmTryCompileExec.dir/CheckFunctionExists.c.o -o cmTryCompileExec -rdynamic /usr/local/lib/libfftw3.a /usr/local/lib/libfftw3.a(mapflags.o): In function `fftw_mapflags': mapflags.c:(.text+0x440): undefined reference to `log' /usr/local/lib/libfftw3.a(trig.o): In function `real_cexp': trig.c:(.text+0x205): undefined reference to `sincos' collect2: ld returned 1 exit status make[1]: *** [cmTryCompileExec] Error 1 make[1]: Leaving directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' make: *** [cmTryCompileExec/fast] Error 2 Determining if the function pthread_create exists in the pthreads failed with the following output: Change Dir: /home/rp/src/tools/CMakeFiles/CMakeTmp Run Build Command:/usr/bin/make "cmTryCompileExec/fast" /usr/bin/make -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/ cmTryCompileExec.dir/build make[1]: Entering directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' /usr/local/bin/cmake -E cmake_progress_report /home/rp/src/tools/ CMakeFiles/CMakeTmp/CMakeFiles 1 Building C object CMakeFiles/cmTryCompileExec.dir/ CheckFunctionExists.c.o /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/local/share/ cmake-2.8/Modules/CheckFunctionExists.c Linking C executable cmTryCompileExec /usr/local/bin/cmake -E cmake_link_script CMakeFiles/ cmTryCompileExec.dir/link.txt --verbose=1 /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -o cmTryCompileExec - rdynamic -lpthreads /usr/bin/ld: cannot find -lpthreads collect2: ld returned 1 exit status make[1]: *** [cmTryCompileExec] Error 1 make[1]: Leaving directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' make: *** [cmTryCompileExec/fast] Error 2 Determining if the function fftw_plan_r2r_1d exists in the /usr/local/ lib/libfftw3.a failed with the following output: Change Dir: /home/rp/src/tools/CMakeFiles/CMakeTmp Run Build Command:/usr/bin/make "cmTryCompileExec/fast" /usr/bin/make -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/ cmTryCompileExec.dir/build make[1]: Entering directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' /usr/local/bin/cmake -E cmake_progress_report /home/rp/src/tools/ CMakeFiles/CMakeTmp/CMakeFiles 1 Building C object CMakeFiles/cmTryCompileExec.dir/ CheckFunctionExists.c.o /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=fftw_plan_r2r_1d -o CMakeFiles/cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/ local/share/cmake-2.8/Modules/CheckFunctionExists.c Linking C executable cmTryCompileExec /usr/local/bin/cmake -E cmake_link_script CMakeFiles/ cmTryCompileExec.dir/link.txt --verbose=1 /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=fftw_plan_r2r_1d CMakeFiles/cmTryCompileExec.dir/CheckFunctionExists.c.o -o cmTryCompileExec -rdynamic /usr/local/lib/libfftw3.a /usr/local/lib/libfftw3.a(mapflags.o): In function `fftw_mapflags': mapflags.c:(.text+0x440): undefined reference to `log' /usr/local/lib/libfftw3.a(trig.o): In function `real_cexp': trig.c:(.text+0x205): undefined reference to `sincos' collect2: ld returned 1 exit status make[1]: *** [cmTryCompileExec] Error 1 make[1]: Leaving directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' make: *** [cmTryCompileExec/fast] Error 2 Determining if the function pthread_create exists in the pthreads failed with the following output: Change Dir: /home/rp/src/tools/CMakeFiles/CMakeTmp Run Build Command:/usr/bin/make "cmTryCompileExec/fast" /usr/bin/make -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/ cmTryCompileExec.dir/build make[1]: Entering directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' /usr/local/bin/cmake -E cmake_progress_report /home/rp/src/tools/ CMakeFiles/CMakeTmp/CMakeFiles 1 Building C object CMakeFiles/cmTryCompileExec.dir/ CheckFunctionExists.c.o /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/local/share/ cmake-2.8/Modules/CheckFunctionExists.c Linking C executable cmTryCompileExec /usr/local/bin/cmake -E cmake_link_script CMakeFiles/ cmTryCompileExec.dir/link.txt --verbose=1 /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -o cmTryCompileExec - rdynamic -lpthreads /usr/bin/ld: cannot find -lpthreads collect2: ld returned 1 exit status make[1]: *** [cmTryCompileExec] Error 1 make[1]: Leaving directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' make: *** [cmTryCompileExec/fast] Error 2 Determining if the function fftw_plan_r2r_1d exists in the /usr/local/ lib/libfftw3.a failed with the following output: Change Dir: /home/rp/src/tools/CMakeFiles/CMakeTmp Run Build Command:/usr/bin/make "cmTryCompileExec/fast" /usr/bin/make -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/ cmTryCompileExec.dir/build make[1]: Entering directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' /usr/local/bin/cmake -E cmake_progress_report /home/rakhee/src/tools/ CMakeFiles/CMakeTmp/CMakeFiles 1 Building C object CMakeFiles/cmTryCompileExec.dir/ CheckFunctionExists.c.o /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=fftw_plan_r2r_1d -o CMakeFiles/cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/ local/share/cmake-2.8/Modules/CheckFunctionExists.c Linking C executable cmTryCompileExec /usr/local/bin/cmake -E cmake_link_script CMakeFiles/ cmTryCompileExec.dir/link.txt --verbose=1 /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=fftw_plan_r2r_1d CMakeFiles/cmTryCompileExec.dir/CheckFunctionExists.c.o -o cmTryCompileExec -rdynamic /usr/local/lib/libfftw3.a /usr/local/lib/libfftw3.a(mapflags.o): In function `fftw_mapflags': mapflags.c:(.text+0x440): undefined reference to `log' /usr/local/lib/libfftw3.a(trig.o): In function `real_cexp': trig.c:(.text+0x205): undefined reference to `sincos' collect2: ld returned 1 exit status make[1]: Leaving directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' make[1]: *** [cmTryCompileExec] Error 1 make: *** [cmTryCompileExec/fast] Error 2 Determining if the function pthread_create exists in the pthreads failed with the following output: Change Dir: /home/rp/src/tools/CMakeFiles/CMakeTmp Run Build Command:/usr/bin/make "cmTryCompileExec/fast" /usr/bin/make -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/ cmTryCompileExec.dir/build make[1]: Entering directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' /usr/local/bin/cmake -E cmake_progress_report /home/rakhee/src/tools/ CMakeFiles/CMakeTmp/CMakeFiles 1 Building C object CMakeFiles/cmTryCompileExec.dir/ CheckFunctionExists.c.o /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/local/share/ cmake-2.8/Modules/CheckFunctionExists.c Linking C executable cmTryCompileExec /usr/local/bin/cmake -E cmake_link_script CMakeFiles/ cmTryCompileExec.dir/link.txt --verbose=1 /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -o cmTryCompileExec - rdynamic -lpthreads /usr/bin/ld: cannot find -lpthreads collect2: ld returned 1 exit status make[1]: *** [cmTryCompileExec] Error 1 make[1]: Leaving directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' make: *** [cmTryCompileExec/fast] Error 2 Determining if the function fftw_plan_r2r_1d exists in the /usr/local/ lib/libfftw3.a failed with the following output: Change Dir: /home/rp/src/tools/CMakeFiles/CMakeTmp Run Build Command:/usr/bin/make "cmTryCompileExec/fast" /usr/bin/make -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/ cmTryCompileExec.dir/build make[1]: Entering directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' /usr/local/bin/cmake -E cmake_progress_report /home/rakhee/src/tools/ CMakeFiles/CMakeTmp/CMakeFiles 1 Building C object CMakeFiles/cmTryCompileExec.dir/ CheckFunctionExists.c.o /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=fftw_plan_r2r_1d -o CMakeFiles/cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/ local/share/cmake-2.8/Modules/CheckFunctionExists.c Linking C executable cmTryCompileExec /usr/local/bin/cmake -E cmake_link_script CMakeFiles/ cmTryCompileExec.dir/link.txt --verbose=1 /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=fftw_plan_r2r_1d CMakeFiles/cmTryCompileExec.dir/CheckFunctionExists.c.o -o cmTryCompileExec -rdynamic /usr/local/lib/libfftw3.a /usr/local/lib/libfftw3.a(mapflags.o): In function `fftw_mapflags': mapflags.c:(.text+0x440): undefined reference to `log' /usr/local/lib/libfftw3.a(trig.o): In function `real_cexp': trig.c:(.text+0x205): undefined reference to `sincos' collect2: ld returned 1 exit status make[1]: *** [cmTryCompileExec] Error 1 make[1]: Leaving directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' make: *** [cmTryCompileExec/fast] Error 2 Determining if the function pthread_create exists in the pthreads failed with the following output: Change Dir: /home/rp/src/tools/CMakeFiles/CMakeTmp Run Build Command:/usr/bin/make "cmTryCompileExec/fast" /usr/bin/make -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/ cmTryCompileExec.dir/build make[1]: Entering directory `/home/rakhee/src/tools/CMakeFiles/ CMakeTmp' /usr/local/bin/cmake -E cmake_progress_report /home/rp/src/tools/ CMakeFiles/CMakeTmp/CMakeFiles 1 Building C object CMakeFiles/cmTryCompileExec.dir/ CheckFunctionExists.c.o /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/local/share/ cmake-2.8/Modules/CheckFunctionExists.c Linking C executable cmTryCompileExec /usr/local/bin/cmake -E cmake_link_script CMakeFiles/ cmTryCompileExec.dir/link.txt --verbose=1 /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -o cmTryCompileExec - rdynamic -lpthreads /usr/bin/ld: cannot find -lpthreads collect2: ld returned 1 exit status make[1]: *** [cmTryCompileExec] Error 1 make[1]: Leaving directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' make: *** [cmTryCompileExec/fast] Error 2 Determining if the function fftw_plan_r2r_1d exists in the /usr/local/ lib/libfftw3.a failed with the following output: Change Dir: /home/rp/src/tools/CMakeFiles/CMakeTmp Run Build Command:/usr/bin/make "cmTryCompileExec/fast" /usr/bin/make -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/ cmTryCompileExec.dir/build make[1]: Entering directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' /usr/local/bin/cmake -E cmake_progress_report /home/rp/src/tools/ CMakeFiles/CMakeTmp/CMakeFiles 1 Building C object CMakeFiles/cmTryCompileExec.dir/ CheckFunctionExists.c.o /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=fftw_plan_r2r_1d -o CMakeFiles/cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/ local/share/cmake-2.8/Modules/CheckFunctionExists.c Linking C executable cmTryCompileExec /usr/local/bin/cmake -E cmake_link_script CMakeFiles/ cmTryCompileExec.dir/link.txt --verbose=1 /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=fftw_plan_r2r_1d CMakeFiles/cmTryCompileExec.dir/CheckFunctionExists.c.o -o cmTryCompileExec -rdynamic /usr/local/lib/libfftw3.a /usr/local/lib/libfftw3.a(mapflags.o): In function `fftw_mapflags': mapflags.c:(.text+0x440): undefined reference to `log' /usr/local/lib/libfftw3.a(trig.o): In function `real_cexp': trig.c:(.text+0x205): undefined reference to `sincos' collect2: ld returned 1 exit status make[1]: *** [cmTryCompileExec] Error 1 make[1]: Leaving directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' make: *** [cmTryCompileExec/fast] Error 2 Determining if the function pthread_create exists in the pthreads failed with the following output: Change Dir: /home/rakhee/src/tools/CMakeFiles/CMakeTmp Run Build Command:/usr/bin/make "cmTryCompileExec/fast" /usr/bin/make -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/ cmTryCompileExec.dir/build make[1]: Entering directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' /usr/local/bin/cmake -E cmake_progress_report /home/rp/src/tools/ CMakeFiles/CMakeTmp/CMakeFiles 1 Building C object CMakeFiles/cmTryCompileExec.dir/ CheckFunctionExists.c.o /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/local/share/ cmake-2.8/Modules/CheckFunctionExists.c Linking C executable cmTryCompileExec /usr/local/bin/cmake -E cmake_link_script CMakeFiles/ cmTryCompileExec.dir/link.txt --verbose=1 /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=pthread_create CMakeFiles/ cmTryCompileExec.dir/CheckFunctionExists.c.o -o cmTryCompileExec - rdynamic -lpthreads /usr/bin/ld: cannot find -lpthreads collect2: ld returned 1 exit status make[1]: *** [cmTryCompileExec] Error 1 make[1]: Leaving directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' make: *** [cmTryCompileExec/fast] Error 2 Determining if the function fftw_plan_r2r_1d exists in the /path/to/ libfftw3.so failed with the following output: Change Dir: /home/rp/src/tools/CMakeFiles/CMakeTmp Run Build Command:/usr/bin/make "cmTryCompileExec/fast" /usr/bin/make -f CMakeFiles/cmTryCompileExec.dir/build.make CMakeFiles/ cmTryCompileExec.dir/build make[1]: Entering directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' /usr/local/bin/cmake -E cmake_progress_report /home/rp/src/tools/ CMakeFiles/CMakeTmp/CMakeFiles 1 Building C object CMakeFiles/cmTryCompileExec.dir/ CheckFunctionExists.c.o /usr/bin/gcc -DCHECK_FUNCTION_EXISTS=fftw_plan_r2r_1d -o CMakeFiles/cmTryCompileExec.dir/CheckFunctionExists.c.o -c /usr/ local/share/cmake-2.8/Modules/CheckFunctionExists.c make[1]: *** No rule to make target `/path/to/libfftw3.so', needed by `cmTryCompileExec'. Stop. make[1]: Leaving directory `/home/rp/src/tools/CMakeFiles/CMakeTmp' make: *** [cmTryCompileExec/fast] Error 2 Thank you Rakhee On Dec 17, 5:12 pm, Christoph Junghans <[email protected]> wrote: > Can you please post /home/rp/src/tools/CMakeFiles/CMakeError.log? > > Am 17. Dezember 2011 13:22 schrieb rp <[email protected]>: > > > > > > > > > I installed all dependencies and ,get an error as below .Can you tell > > me where am I going wrong. > > > checking for module 'fftw3' > > -- found fftw3, version 3.3 > > -- Found FFTW3: /usr/local/lib/libfftw3.a > > -- Looking for fftw_plan_r2r_1d in /usr/local/lib/libfftw3.a > > -- Looking for fftw_plan_r2r_1d in /usr/local/lib/libfftw3.a - not > > found > > CMake Error at CMakeModules/FindFFTW3.cmake:43 (message): > > Could not find fftw_plan_r2r_1d in /usr/local/lib/libfftw3.a, take a > > look > > at the error message in /home/rp/src/tools/CMakeFiles/CMakeError.log > > to > > find out what was going wrong. If you don't have pkg-config > > installed you > > will most likely have to set FFTW3_LIBRARY by hand (i.e. > > -DFFTW3_LIBRARY='/path/to/libfftw3.so') ! > > Call Stack (most recent call first): > > src/libtools/CMakeLists.txt:11 (find_package) > > > -- Configuring incomplete, errors occurred! > > > Thanks, I appreciate > > > On Dec 16, 11:24 am, Christoph Junghans <[email protected]> wrote: > >> Please read: > >> <http://code.google.com/p/votca/wiki/Installing#From_Source> > > >> As described there, you need to add: > >> -DEXTERNAL_BOOST=OFF to the commandline of build.sh, e.g. > > >> ./build.sh ....-DEXTERNAL_BOOST=OFF .... tools csg > > >> Alternatively, you could install boost and its dev package, see: > >> <http://code.google.com/p/votca/wiki/Dependencies> > > >> Christoph > > >> Am 15. Dezember 2011 23:25 schrieb rp <[email protected]>: > > >> > Following my previous message I reinstalled cmake and tried the steps > >> > again to configure votca, this provides me with a different error as > >> > below > >> > Looking for sqrt in m - found-- Could NOT find BoostCMake Error at src/ > >> > CMakeLists.txt:5 (message): Boost not found, make sure you have also > >> > installed boost and it's dev package or use our internal replacement > >> > set -DEXTERNAL_BOOST=OFF > > >> > -- Configuring incomplete, errors occurred! > >> > Can someone tell me how can I turn DEEXTERNAL_BOOST=OFF > >> > Thanks > > >> > On Dec 15, 10:35 pm, rp <[email protected]> wrote: > >> >> This is what I get after the command line > > >> >> + shift > >> >> + [[ -prefix = -* ]] > >> >> + [[ -prefix = --*=* ]] > >> >> + [[ -prefix = -[^-]?* ]] > >> >> + [[ -prefix = -[jpD]* ]] > >> >> + set -- -p refix --latest tools csg > >> >> + case $1 in > >> >> + prefix=refix > >> >> + shift 2 > >> >> + [[ --latest = -* ]] > >> >> + [[ --latest = --*=* ]] > >> >> + [[ --latest = -[^-]?* ]] > >> >> + case $1 in > >> >> + rel=1.2.1 > >> >> + shift > >> >> + [[ tools = -* ]] > >> >> + version_check -q > >> >> ++ get_version ./build.sh > >> >> ++ sed -ne 's/^#version[[:space:]]*\([^[:space:]]*\)[[:space:]]*-- .*$/ > >> >> \1/p' ./build.sh > >> >> ++ sed -n '$p' > >> >> + old_version=1.7.8 > >> >> + '[' -q = -q ']' > >> >> ++ get_webversion -q > >> >> ++ local version > >> >> ++ '[' -q = -q ']' > >> >> +++ wget -qO-http://votca.googlecode.com/hg/build.sh > >> >> +++ get_version > >> >> +++ sed -ne 's/^#version[[:space:]]*\([^[:space:]]*\)[[:space:]]*-- .* > >> >> $/\1/p' > >> >> +++ sed -n '$p' > >> >> ++ version=1.7.8 > >> >> ++ echo 1.7.8 > >> >> + new_version=1.7.8 > >> >> + '[' -q = -q ']' > >> >> + '[' -q = -q ']' > >> >> + expr 1.7.8 '<' 1.7.8 > >> >> + return 1 > >> >> + [[ -z tools ]] > >> >> + [[ -z refix ]] > >> >> + [[ refix = *WHERE/TO/INSTALL/VOTCA* ]] > >> >> + [[ refix = /* ]] > >> >> + die 'prefix has to be a global path (should start with a '\''/'\'')' > >> >> + [[ -n prefix has to be a global path (should start with a '/') ]] > >> >> + cecho RED 'prefix has to be a global path (should start with a > >> >> '\''/'\'')' > >> >> + local opts color 'colors=BLUE CYAN CYANN GREEN RED PURP' > >> >> + [[ RED = -?* ]] > >> >> + [[ -z prefix has to be a global path (should start with a '/') ]] > >> >> + is_in RED 'BLUE CYAN CYANN GREEN RED PURP' > >> >> + [[ -z RED ]] > >> >> + [[ -z BLUE CYAN CYANN GREEN RED PURP ]] > >> >> + [[ BLUE CYAN CYANN GREEN RED PURP = *\ \R\E\D\ * ]] > >> >> + color='' > >> >> + shift > >> >> + echo -n '' > >> >> + echo -ne 'prefix has to be a global path (should start with a > >> >> '\''/'\'')' > >> >> prefix has to be a global path (should start with a '/')+ echo '' > > >> >> + exit 1 > > >> >> Thanks for your time. I appreciate > > >> >> On Dec 15, 10:00 pm, Christoph Junghans <[email protected]> wrote: > > >> >> > Just run: > >> >> > $ ./build.sh --debug -prefix ${prefix} --latest tools csg > > >> >> > Am 15. Dezember 2011 19:46 schrieb rp <[email protected]>: > > >> >> > > This is cmake 2.8.6 and I am installing votca in Ubuntu11.10. After > >> >> > > installing cmake there is no error . > > >> >> > > Where should I add the debug option , please explain > > >> >> > > I am installing votca-csg-1.2.1 . I want to make this clarification > >> >> > > , > >> >> > > I was using REDhat linux previously , now I am trying to do this in > >> >> > > Ubuntu .I read the Votca installation page and this says Ubuntu is > >> >> > > still in development . I am sorry if my question is not clear. > >> >> > > I appreciate your help > >> >> > > Thanks > >> >> > > On Dec 15, 7:50 pm, Christoph Junghans <[email protected]> wrote: > >> >> > >> Hi rp, > > >> >> > >> which version of cmake is it? > >> >> > >> $cmake --version > > >> >> > >> Please add the '--debug' option and attach the output. > > >> >> > >> Cheers, > > >> >> > >> Christoph > > >> >> > >> Am 15. Dezember 2011 11:42 schrieb rp <[email protected]>: > > >> >> > >> > Dear Users,I get the following error while installing "cmake not > >> >> > >> > found" , below are some lines. Then I installed cmake and tried > >> >> > >> > again > >> >> > >> > so this send me the error as prefix shoudl start with / as this > >> >> > >> > is > >> >> > >> > global path . I used as ./build.sh -prefix ${prefix} --latest > >> >> > >> > tools > >> >> > >> > csg > > >> >> > >> > Using 9 jobs for makeWorking on toolsDownload tarball votca- > >> >> > >> > tools-1.2.1.tar.gz > >> >> > >> > fromhttp://votca.googlecode.com/files/votca-tools-1.2.1.tar.gz--2011-12-15 > >> >> > >> > 13:26:17-- http://votca.googlecode.com/files/votca- > >> >> > >> > tools-1.2.1.tar.gzResolving votca.googlecode.com... > >> >> > >> > 74.125.65.82Connecting to > >> >> > >> > votca.googlecode.com|74.125.65.82|:80... > >> >> > >> > connected.HTTP request sent, awaiting response... 200 OKLength: > >> >> > >> > 961500 > >> >> > >> > (939K) [application/x-gzip]Saving to: `votca-tools-1.2.1.tar.gz' > >> >> > >> > 100%[======================================>] 961,500 > >> >> > >> > 2.16M/s in > >> >> > >> > 0.4s > >> >> > >> > 2011-12-15 13:26:18 (2.16 MB/s) - `votca-tools-1.2.1.tar.gz' > >> >> > >> > saved > >> >> > >> > [961500/961500] > >> >> > >> > cmake not found > > >> >> > >> > Thanks for any suggestions > >> >> > >> > On Nov 17, 4:17 pm, Marc Segovia <[email protected]> wrote: > >> >> > >> >> Hi > > >> >> > >> >> Provided you have dependecies fine, follow the steps > > >> >> > >> >> prefix=WHERE/TO/INSTALL/VOTCA > >> >> > >> >> mkdir -p ${prefix}/src > >> >> > >> >> cd ${prefix}/src > >> >> > >> >> wgethttp://votca.googlecode.com/hg/build.sh > >> >> > >> >> chmod +x build.sh > >> >> > >> >> ./build.sh --prefix ${prefix} tools csg > > >> >> > >> >> maybe you can add gromacs on last line, like this > > >> >> > >> >> ./build.sh --prefix ${prefix} gromacs tools csg > > >> >> > >> >> regards > >> >> > >> >> Marc > >> >> > >> >> Universidad de la Republica Uruguay > > >> >> > >> >> On Thu, Nov 17, 2011 at 7:01 PM, rp <[email protected]> > >> >> > >> >> wrote: > >> >> > >> >> > Yes I have seen this installation page . I downloaded Votca > >> >> > >> >> > and would > >> >> > >> >> > like to know how should I go about installing thisin a linux > >> >> > >> >> > box or in > >> >> > >> >> > linux cluster. > > >> >> > >> >> > Thanks > > >> >> > >> >> > On Nov 17, 3:38 pm, Konstantin Koschke > >> >> > >> >> > <[email protected]> > >> >> > >> >> > wrote: > >> >> > >> >> >> On Thu, Nov 17, 2011 at 8:22 PM, rp <[email protected]> > >> >> > >> >> >> wrote: > >> >> > >> >> >> > Can you send to instructions to install votca in linux. > > >> >> > >> >> >> > Thanks for help > > >> >> > >> >> >> > -- > >> >> > >> >> >> > You received this message because you are subscribed to > >> >> > >> >> >> > the Google Groups "votca" group. > >> >> > >> >> >> > To post to this group, send email to > >> >> > >> >> >> > [email protected]. > >> >> > >> >> >> > To unsubscribe from this group, send email to > >> >> > >> >> >> > [email protected]. > >> >> > >> >> >> > For more options, visit this group > >> >> > >> >> >> > athttp://groups.google.com/group/votca?hl=en. > > >> >> > >> >> >> Dear rp, > > >> >> > >> >> >> please be a bit more precise with your problem. > > >> >> > >> >> >> Did you try > >> >> > >> >> >> followinghttp://code.google.com/p/votca/wiki/Installing? > > >> >> > >> >> >> cheers, > >> >> > >> >> >> konstantin > > >> >> > >> >> > -- > >> >> > >> >> > You received this message because you are subscribed to the > >> >> > >> >> > Google Groups "votca" group. > >> >> > >> >> > To post to this group, send email to [email protected]. > >> >> > >> >> > To unsubscribe from this group, send email to > >> >> > >> >> > [email protected]. > >> >> > >> >> > For more options, visit this group > >> >> > >> >> > athttp://groups.google.com/group/votca?hl=en. > > >> >> > >> > -- > >> >> > >> > You received this message because you are subscribed to the > >> >> > >> > Google Groups "votca" group. > >> >> > >> > To post to this group, send email to [email protected]. > >> >> > >> > To unsubscribe from this group, send email to > >> >> > >> > [email protected]. > >> >> > >> > For more options, visit this group > >> >> > >> > athttp://groups.google.com/group/votca?hl=en. > > >> >> > >> -- > >> >> > >> Christoph Junghans > >> >> > >> Web:http://www.compphys.de > > >> >> > > -- > >> >> > > You received this message because you are subscribed to the Google > >> >> > > Groups "votca" group. > >> >> > > To post to this group, send email to [email protected]. > >> >> > > To unsubscribe from this group, send email to > >> >> > > [email protected]. > >> >> > > For more options, visit this group > >> >> > > athttp://groups.google.com/group/votca?hl=en. > > >> >> > -- > >> >> > Christoph Junghans > >> >> > Web:http://www.compphys.de > > >> > -- > >> > You received this message because you are subscribed to the Google > >> > Groups "votca" group. > >> > To post... > > read more » -- You received this message because you are subscribed to the Google Groups "votca" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/votca?hl=en.
