Hi Kris,

Please post any specific error or output messages and we might be able
to understand more about what's going on.

Natalie


On Fri, Jan 30, 2009 at 8:12 AM, Kris <[email protected]> wrote:
>
> I found that the Proteomics Browser suite only works activeperl 5.8.6
> (I don't have the version in front of me, but I think that is it.)
>
> I installed TPP 1 revision back and it seemed to work. Then I tried to
> transfer TPP to the D drive and had some difficulties which I believe
> were unrelated. I uninstalled and put it back on the C: drive to try
> to see if I could get TPP running from the normal drive.
>
> The Proteomics Browser Suite uses IIS for their web server, and TPP
> has to use Apache. I installed both and set the port for Apache to a
> port different from 80 (8888) so that they won't conflict.
>
> Anyways, my problem now is that when I run SEQUEST through TPP I get a
> sequest27.exe error after each Mzxml file finishes running. It looks
> like sequest27.exe is crashing. I'm not really sure how to fix this. I
> know I have a licensed copy of SEQUEST because I can run it through
> the Proteomics Browser Suite. I think the problem has something to do
> with TPP trying to run SEQUEST and IIS is blocking it. But the problem
> could be related to previous installs of TPP not being fully removed,
> changing the port on apache, something from when I tried to put TPP on
> the D drive, the version of activeperl, or something I haven't even
> considered.
>
> If anyone has any advice as to why I am getting the sequest27.exe
> error or how to fix it, please let me know.
>
> Thanks and thank you for your advice Natalie,
> Kris
>
> On Jan 27, 6:40 pm, Natalie Tasman <[email protected]> wrote:
>> Hi Kris,
>>
>> Are you able to contact your Thermo sales representative and get any advice
>> from their side?  Perl 5.8.6 is an out-of-date version of perl.
>>
>> Regarding webservers, why not use the TPP with the Apache webserver (which
>> it can install and configure) for you?  You can then edit the Apache config
>> (from the start menu) and choose another port to listen on (remember to
>> configure your firewall appropriately for the other port.)
>>
>> Regarding installing TPP on a drive other than C:, there have been somes
>> posts on the newsgroup about this topic.  I would search for the most recent
>> topics.
>>
>> Hope this helps, and please let us know how it works,
>>
>> Natalie
>>
>> On Tue, Jan 27, 2009 at 3:31 PM, Kris <[email protected]> wrote:
>>
>> > Hi,
>>
>> > I just got a brand new install of bioworks and the Proteomics Browser
>> > Suite (including SEQUEST). This install required activeperl 5.8.6.811
>> > and IIS. Now I'm trying to install TPP, but I want to still be able to
>> > use the proteomics browser suite.
>>
>> > I cannot change the version of activeperl, but TPP says that it
>> > requires a newever version of activeperl. When I change the version,
>> > it breaks the proteomics browser. Any suggestions as to how to get
>> > activeperl to work with both programs?
>>
>> > I also tried running TPP off the IIS server, and this throws an error
>> > immediately after logging into TPP. If I install tomcat, it uses the
>> > same port (80) as IIS, which breaks the Proteomics Browser Suite
>> > again. Any suggestions as to how I can configure the servers so that
>> > both programs work?
>>
>> > Lastly, everything so far is configured for my C: drive. I would like
>> > to put TPP on the secondary D: drive. Or I would at least like to have
>> > TPP access a folder off of the D: drive. If anyone knows how to
>> > configure this, please comment as well.
>>
>> > Thanks in advance for your help,
>> > Kris
> >
>

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