Hi Natalie I have fixed the problem. The GUI was looking for the the trans_proteomic_pipeline folder but cannot find it. I have unzipped it in my C drive.
Regards Ali On Jul 7, 6:02 pm, Natalie Tasman <[email protected]> wrote: > Hello Ali, > It sounds like you're using the command-line version of the converter > ("ReAdW"). The easiest way to get started with the TPP on Windows is > to download the complete TPP installer, which will set up and > configure a web-based interface. This interface should be a lot > easier to use. > > If you do want to stick with the command-line version, you just need > to type "readw.exe --mzXML <your filename.raw>", > to specify mzXML output. > > Best wishes, and please let us know how it goes, > > Natalie > > On Tue, Jul 7, 2009 at 4:39 AM, Ali <[email protected]> wrote: > > > Hi > > > I'm new to TPP. I downloaded the software and attempted to convert > > XCalibur .RAW to mzXML files as the first step of the pipeline. This > > however failed as it complains of '--mzXML unknown option'. I checked > > in my tpp-bin file that I have the ReAdW file. I used the ReAdW in > > dos and it converted the .RAW file but it doesn't seem to work in > > TPP. Any advice will be appreciated. --~--~---------~--~----~------------~-------~--~----~ You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected] To unsubscribe from this group, send email to [email protected] For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en -~----------~----~----~----~------~----~------~--~---
