I seem to be getting the error with the NIST built library as well as
my own libraries.

Tharan

On Jul 6, 6:21 pm, Luis Mendoza <[email protected]> wrote:
> Hello,
> This looks like a potential bug in our ProteinProphet Viewer; can you please
> confirm that this always happens when you analyze results from a library you
> built?  In the meantime, please continue to open the spectra using the links
> in the PepXMLViewer.
>
> Thanks for the report,
> --Luis
>
> On Thu, Jun 25, 2009 at 11:51 AM, stharan <[email protected]> wrote:
>
> > Hi All,
>
> > I'm using TPP v4.2 JETSTREAM rev 1, Build 200904071723 (MinGW) and I
> > have built my own spectral library to be used with SpectraST.  Library
> > building works fine, searching using that library works fine and your
> > able to run the prophets on the data.  However, when you open
> > prot.shtml, click on a peptide, and try to look at the spectrum,
> > plotspectrast throws an error and dies (the address bar looks like
>
> >http://localhost/tpp-bin/plotspectrast.cgi?LibFile=NOT_FOUND&LibFileO...
> > :\Inetpub\wwwroot\ISB\data\ubls/fat10_trp_run1&QueryScanNum=10128).
> > I can view the same spectrum fine, if i follow the links through
> > pep.shtml (address bar gets passed the correct libfile location:
>
> >http://localhost/tpp-bin/plotspectrast.cgi?LibFile=c:/Inetpub/wwwroot...
> > )
>
> > Any suggestions?

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