Hi All, I'm using TPP v4.2 JETSTREAM rev 1, Build 200904071723 (MinGW) and I have built my own spectral library to be used with SpectraST. Library building works fine, searching using that library works fine and your able to run the prophets on the data. However, when you open prot.shtml, click on a peptide, and try to look at the spectrum, plotspectrast throws an error and dies (the address bar looks like http://localhost/tpp-bin/plotspectrast.cgi?LibFile=NOT_FOUND&LibFileOffset=NOT_FOUND&QueryFile=c:\Inetpub\wwwroot\ISB\data\ubls/fat10_trp_run1&QueryScanNum=10128). I can view the same spectrum fine, if i follow the links through pep.shtml (address bar gets passed the correct libfile location: http://localhost/tpp-bin/plotspectrast.cgi?LibFile=c:/Inetpub/wwwroot/ISB/data/ubls/fat10_trp_consensus.splib&LibFileOffset=172490&QueryFile=c:/Inetpub/wwwroot/ISB/data/ubls/fat10_trp_run1.mzXML&QueryScanNum=10128)
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