Hi Luis, Thank you so much for that! What do you mean by Unique_Peptide_Identifier? Any number_letter combination? Are the flanking aminoacids for all peptides the same as in your example: K___W?
Thanks again, Xuan 2009/12/17 Luis Mendoza <[email protected]> > Hello Xuan, > I am told that the format for the text file should be: > > Unique_Peptide_Identifier KTHEPEPTIDERW > > one peptide per line. You must also include both flanking aminoacids in > the peptide sequence (in the example line above, the actual peptide is > THEPEPTIDER). Also, make sure that each peptide identifier is unique, and > that it contains no spaces. > > Hope this helps, > --Luis > > > On Wed, Dec 2, 2009 at 7:47 PM, wooyeah <[email protected]> wrote: > >> Dear all, >> >> I am using PeptideSieve, does anybody know the format of input txt >> file that contain peptide sequence rather than protein fasta file? >> >> Thanks >> Xuan >> >> -- >> >> You received this message because you are subscribed to the Google Groups >> "spctools-discuss" group. >> To post to this group, send email to [email protected]. >> To unsubscribe from this group, send email to >> [email protected]<spctools-discuss%[email protected]> >> . >> For more options, visit this group at >> http://groups.google.com/group/spctools-discuss?hl=en. >> >> >> > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To post to this group, send email to [email protected]. > To unsubscribe from this group, send email to > [email protected]<spctools-discuss%[email protected]> > . > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en. > -- Xuan -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
