I have installed boost-1.38.0 by following procedure prior to installation of TPP ...
Here is the procedure ... ---------------------------- ############# ## ## Step 1: Download and install boost 1.38.0 ## ## I will install Boost 1.38.0 onto /opt/boost_1_38_0 to avoid conflict with ## the default version installed by RedHat ############# cd /opt wget -nd http://downloads.sourceforge.net/boost/boost_1_38_0.tar.gz?use_mirror... tar xzf boost_1_38_0.tar.gz ln -s boost_1_38_0 boost cd boost ./configure --prefix=/opt/boost make -j5 make install echo "/opt/boost/lib" > /etc/ld.so.conf.d/boost-1_38_0.conf ldconfig ---------------------------- Create Makefile.config.incl in the trans_proteomic_pipeline/src/ directory ... --------------------------------------------------------------------------------------------------------------------- ############ Begin Makefile.config.incl #################### TPP_ROOT=/mnt/sanfs/APCF/APCF_WEB/tpp/ ## for Boost BOOST_INCL=-I/opt/boost/ BOOST_LIBDIR=/opt/boost/lib BOOST_LIBSPEC=-gcc41-mt LINK=shared LIBEXT=so ## for perl PERL_LIB_CORE=/usr/lib64/perl5/5.8.8/x86_64-linux-thread-multi/CORE/ PERL_BIN=/usr/bin/perl ############ End Makefile.config.incl #################### ---------------------------------------------------------------------------------------------------------- You need to change TPP_ROOT to suit your directory structure ... cd trans_proteomic_pipeline/src/ make all make install Best of luck ... Jagan On Sat, Jul 10, 2010 at 5:09 AM, bmcnally <[email protected]> wrote: > Hello list, > > I'm attempting to build TPP 4.3-1 on RHEL 5.4, gcc 4.1.2. I think I > have all of the required libraries specified here: > > install-prerequisites-centos-5_2.sh > > Here's what happens when I try and `make all`: > > mkdir -p /tmp/trans_proteomic_pipeline/src/../build/linux > building boost libraries... > warning: No toolsets are configured. > warning: Configuring default toolset "gcc". > warning: If the default is wrong, your build may not work correctly. > warning: Use the "toolset=xxxxx" option to override our guess. > warning: For more configuration options, please consult > warning: > http://boost.org/boost-build2/doc/html/bbv2/advanced/configuration.html > warning: Building Boost.Regex with the optional Unicode/ICU support > disabled. > note: Please refer to the Boost.Regex documentation for more > information > note: this is a strictly optional feature. > ...failed updating 1 target... > > real 0m2.283s > user 0m2.375s > sys 0m0.240s > [ERROR] Boost libary build failed (missing /tmp/ > trans_proteomic_pipeline/src/../build/linux/boost/lib/ > libboost_filesystem.a), please report the results of manually running > the following commands: > cd /tmp/trans_proteomic_pipeline/src/../extern/boost_1_39_0/; time / > tmp/trans_proteomic_pipeline/src/../extern/boost_1_39_0/tools/jam/src/ > bin.linuxx86_64/bjam -q -d0 --stagedir=/tmp/trans_proteomic_pipeline/ > src/../build/linux/boost --layout=system --build-type=minimal -j3 > variant=release link=static runtime-link=shared --with-filesystem -- > with-date_time --with-iostreams --with-program_options --with-regex -- > with-serialization --with-thread stage > make: *** [boost-build-libs] Error 255 > > Manually running the recommend command above results in the same > output: > > cd /tmp/trans_proteomic_pipeline/src/../extern/boost_1_39_0/; time / > tmp/trans_proteomic_pipeline/src/../extern/boost_1_39_0/tools/jam/src/ > bin.linuxx86_64/bjam -q -d0 --stagedir=/tmp/trans_proteomic_pipeline/ > src/../build/linux/boost --layout=system --build-type=minimal -j3 > variant=release link=static runtime-link=shared --with-filesystem -- > with-date_time --with-iostreams --with-program_options --with-regex -- > with-serialization --with-thread stage > warning: No toolsets are configured. > warning: Configuring default toolset "gcc". > warning: If the default is wrong, your build may not work correctly. > warning: Use the "toolset=xxxxx" option to override our guess. > warning: For more configuration options, please consult > warning: > http://boost.org/boost-build2/doc/html/bbv2/advanced/configuration.html > warning: Building Boost.Regex with the optional Unicode/ICU support > disabled. > note: Please refer to the Boost.Regex documentation for more > information > note: this is a strictly optional feature. > ...failed updating 1 target... > > real 0m2.339s > user 0m2.370s > sys 0m0.241s > > Any thoughts? > > Thanks. > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To post to this group, send email to [email protected]. > To unsubscribe from this group, send email to > [email protected]<spctools-discuss%[email protected]> > . > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en. > > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. 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