Thanks Jagan. I was able to get it working. It turns out I had some issues with gcc.
On Jul 11, 7:30 pm, Jagan Kommineni <[email protected]> wrote: > I have installed boost-1.38.0 by following procedure prior to installation > of TPP ... > > Here is the procedure ... > > ---------------------------- > ############# > ## > ## Step 1: Download and install boost 1.38.0 > ## > ## I will install Boost 1.38.0 onto /opt/boost_1_38_0 to avoid conflict with > ## the default version installed by RedHat > ############# > cd /opt > wget > -ndhttp://downloads.sourceforge.net/boost/boost_1_38_0.tar.gz?use_mirror... > tar xzf boost_1_38_0.tar.gz > ln -s boost_1_38_0 boost > cd boost > ./configure --prefix=/opt/boost > make -j5 > make install > echo "/opt/boost/lib" > /etc/ld.so.conf.d/boost-1_38_0.conf > ldconfig > ---------------------------- > Create Makefile.config.incl in the trans_proteomic_pipeline/src/ directory > ... > --------------------------------------------------------------------------------------------------------------------- > ############ Begin Makefile.config.incl #################### > TPP_ROOT=/mnt/sanfs/APCF/APCF_WEB/tpp/ > > ## for Boost > BOOST_INCL=-I/opt/boost/ > BOOST_LIBDIR=/opt/boost/lib > BOOST_LIBSPEC=-gcc41-mt > LINK=shared > LIBEXT=so > > ## for perl > PERL_LIB_CORE=/usr/lib64/perl5/5.8.8/x86_64-linux-thread-multi/CORE/ > PERL_BIN=/usr/bin/perl > ############ End Makefile.config.incl #################### > ---------------------------------------------------------------------------------------------------------- > You need to change TPP_ROOT to suit your directory structure ... > cd trans_proteomic_pipeline/src/ > make all > make install > > Best of luck ... > > Jagan > > On Sat, Jul 10, 2010 at 5:09 AM, bmcnally <[email protected]> wrote: > > Hello list, > > > I'm attempting to build TPP 4.3-1 on RHEL 5.4, gcc 4.1.2. I think I > > have all of the required libraries specified here: > > > install-prerequisites-centos-5_2.sh > > > Here's what happens when I try and `make all`: > > > mkdir -p /tmp/trans_proteomic_pipeline/src/../build/linux > > building boost libraries... > > warning: No toolsets are configured. > > warning: Configuring default toolset "gcc". > > warning: If the default is wrong, your build may not work correctly. > > warning: Use the "toolset=xxxxx" option to override our guess. > > warning: For more configuration options, please consult > > warning: > >http://boost.org/boost-build2/doc/html/bbv2/advanced/configuration.html > > warning: Building Boost.Regex with the optional Unicode/ICU support > > disabled. > > note: Please refer to the Boost.Regex documentation for more > > information > > note: this is a strictly optional feature. > > ...failed updating 1 target... > > > real 0m2.283s > > user 0m2.375s > > sys 0m0.240s > > [ERROR] Boost libary build failed (missing /tmp/ > > trans_proteomic_pipeline/src/../build/linux/boost/lib/ > > libboost_filesystem.a), please report the results of manually running > > the following commands: > > cd /tmp/trans_proteomic_pipeline/src/../extern/boost_1_39_0/; time / > > tmp/trans_proteomic_pipeline/src/../extern/boost_1_39_0/tools/jam/src/ > > bin.linuxx86_64/bjam -q -d0 --stagedir=/tmp/trans_proteomic_pipeline/ > > src/../build/linux/boost --layout=system --build-type=minimal -j3 > > variant=release link=static runtime-link=shared --with-filesystem -- > > with-date_time --with-iostreams --with-program_options --with-regex -- > > with-serialization --with-thread stage > > make: *** [boost-build-libs] Error 255 > > > Manually running the recommend command above results in the same > > output: > > > cd /tmp/trans_proteomic_pipeline/src/../extern/boost_1_39_0/; time / > > tmp/trans_proteomic_pipeline/src/../extern/boost_1_39_0/tools/jam/src/ > > bin.linuxx86_64/bjam -q -d0 --stagedir=/tmp/trans_proteomic_pipeline/ > > src/../build/linux/boost --layout=system --build-type=minimal -j3 > > variant=release link=static runtime-link=shared --with-filesystem -- > > with-date_time --with-iostreams --with-program_options --with-regex -- > > with-serialization --with-thread stage > > warning: No toolsets are configured. > > warning: Configuring default toolset "gcc". > > warning: If the default is wrong, your build may not work correctly. > > warning: Use the "toolset=xxxxx" option to override our guess. > > warning: For more configuration options, please consult > > warning: > >http://boost.org/boost-build2/doc/html/bbv2/advanced/configuration.html > > warning: Building Boost.Regex with the optional Unicode/ICU support > > disabled. > > note: Please refer to the Boost.Regex documentation for more > > information > > note: this is a strictly optional feature. > > ...failed updating 1 target... > > > real 0m2.339s > > user 0m2.370s > > sys 0m0.241s > > > Any thoughts? > > > Thanks. > > > -- > > You received this message because you are subscribed to the Google Groups > > "spctools-discuss" group. > > To post to this group, send email to [email protected]. > > To unsubscribe from this group, send email to > > [email protected]<spctools-discuss%[email protected]> > > . > > For more options, visit this group at > >http://groups.google.com/group/spctools-discuss?hl=en. -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. 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