Alex, Will look into the problem. In the meantime try unsetting your JAVA_HOME environment variable before running make. This should skip building the java components.
-Joe On Tue, Aug 17, 2010 at 6:49 AM, Alex <[email protected]> wrote: > Hi Guys, > > I'm getting the following error when building the TPP on Linux for > PepcView which then stops the process. Any ideas what is wrong ? > > Cheers, > Alex > > rm -rf Quantitation/Pepc/PepcView/GWTCompilerOutputpepcview/ > com.insilicos.PepcView/* > export CLASSPATH="" ; ant -f Quantitation/Pepc/PepcView/build.xml > compile.gwt.pepcview > Buildfile: Quantitation/Pepc/PepcView/build.xml > > compile.module.pepcview.production: > > compile.module.pepcview.tests: > > compile.module.pepcview: > > compile.gwt.pepcview: > > run.gwt.compiler.pepcview: > [java] # > [java] # An unexpected error has been detected by Java Runtime > Environment: > [java] # > [java] # SIGSEGV (0xb) at pc=0x00002aaaaadce22a, pid=31127, > tid=1090619712 > [java] # > [java] # Java VM: Java HotSpot(TM) 64-Bit Server VM (10.0-b19 > mixed mode linux-amd64) > [java] # Problematic frame: > [java] # V [libjvm.so+0x1f122a] > [java] # > [java] # An error report file with more information is saved as: > [java] # /usr/local/tpp/sources/tpp_440/src/Quantitation/Pepc/ > PepcView/hs_err_pid31127.log > [java] # > [java] # If you would like to submit a bug report, please visit: > [java] # http://java.sun.com/webapps/bugreport/crash.jsp > [java] # The crash happened outside the Java Virtual Machine in > native code. > [java] # See problematic frame for where to report the bug. > [java] # > [java] Java Result: 134 > > BUILD SUCCESSFUL > Total time: 7 seconds > mkdir -p /usr/local/tpp/sources/tpp_440/src/../build/linux/PepcView > rm -f /usr/local/tpp/sources/tpp_440/src/../build/linux/PepcView/* > cp -f Quantitation/Pepc/PepcView/GWTCompilerOutputpepcview/ > com.insilicos.PepcView/* /usr/local/tpp/sources/tpp_440/src/../build/ > linux/PepcView > cp: cannot stat `Quantitation/Pepc/PepcView/GWTCompilerOutputpepcview/ > com.insilicos.PepcView/*': No such file or directory > make: *** [/usr/local/tpp/sources/tpp_440/src/../build/linux/PepcView/ > PepcView.html] Error 1 > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To post to this group, send email to [email protected]. > To unsubscribe from this group, send email to > [email protected]<spctools-discuss%[email protected]> > . > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en. > > -- Joe Slagel Institute for Systems Biology [email protected] (206) 732-1362 -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
