Hi Damaris, I actually often have similar considerations. I recently worked with Brendan MacLean from the Open Source Program Skyline (MacCoss lab) which is a freely available software. It is available under
Skyline : http://proteome.gs.washington.edu/software/skyline , B. MacLean, M.J. MacCoss et al One can import spectral libraries from any discovery datasets in a very straightforward way, and then display the MSMS from any of the identified peptides in an interactive way, with fragment ions annotated with ion types and observed m/z values. As far as I know recently MCP also allows for "Spectral Viewers", which Skyline should qualify for. Let me know if you are interested or Brendan MacLean can also be of help in this ...., one can contact Brendan through his support page that is part of the Skyline homepage: https://brendanx-uw1.gs.washington.edu/labkey/project/home/support/begin.view Regards, Birgit On Aug 22, 1:43 pm, Damaris Bausch <[email protected]> wrote: > Hi, > For a MCP publication I need to export all MS/MS spectras into images. > Is there somewhere a script available that does that autimatically? > The data has been processed with the TPP. > > Thanks, > Damaris -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
