This version is old and contains many bug that have been fixed in the
latest 4-4 version.  Can you try that one?

On Tue, Aug 24, 2010 at 2:01 PM, Andreas Quandt
<quandt.andr...@gmail.com> wrote:
> dear list,
> for one of my data analysis with iprophet i get a segmentation fault error
> but i am not sure what this means respectively what could have caused it.
> it would be great when anyone of you could point me in the right direction.
> cheers,
> andreas
>
> here the output of iprophet:
> InterProphetParser
> //cluster/scratch/malars/pgrade/PS_TPP_develop_234/PSet_16/collector/input/*.pep.xml
> /cluster/scratch/malars/pgrade/PS_TPP_develop_234/PSet_16/collector/CS/collector.CS.iproph.pep.xml
> Running NSS NRS NSE NSI NSM Model EM:
> Computing NSS values ...
> Computing NRS values ...
> Computing NSE values ...
> Computing NSI values ...
> Computing NSM values ...
> Iterations: .........10...done
> Segmentation fault
> i run iprophet on some mascot results where i used following parameter:
> FRAGMASSERR=0.6
> PRECMASSERR=15
> DBASENAME=sp_9606
> MISSEDCLEAVAGE=1
> XINTERACT=-dDECOY_  -OAdlIw
>
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