hey david,

unfortunately not because this is our cluster installation and we have to
prepare some packages before we can upgrade.

cheers,
andreas

On Wed, Aug 25, 2010 at 1:32 AM, David Shteynberg <
[email protected]> wrote:

> This version is old and contains many bug that have been fixed in the
> latest 4-4 version.  Can you try that one?
>
> On Tue, Aug 24, 2010 at 2:01 PM, Andreas Quandt
> <[email protected]> wrote:
> > dear list,
> > for one of my data analysis with iprophet i get a segmentation fault
> error
> > but i am not sure what this means respectively what could have caused it.
> > it would be great when anyone of you could point me in the right
> direction.
> > cheers,
> > andreas
> >
> > here the output of iprophet:
> > InterProphetParser
> >
> //cluster/scratch/malars/pgrade/PS_TPP_develop_234/PSet_16/collector/input/*.pep.xml
> >
> /cluster/scratch/malars/pgrade/PS_TPP_develop_234/PSet_16/collector/CS/collector.CS.iproph.pep.xml
> > Running NSS NRS NSE NSI NSM Model EM:
> > Computing NSS values ...
> > Computing NRS values ...
> > Computing NSE values ...
> > Computing NSI values ...
> > Computing NSM values ...
> > Iterations: .........10...done
> > Segmentation fault
> > i run iprophet on some mascot results where i used following parameter:
> > FRAGMASSERR=0.6
> > PRECMASSERR=15
> > DBASENAME=sp_9606
> > MISSEDCLEAVAGE=1
> > XINTERACT=-dDECOY_  -OAdlIw
> >
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