Hi Gerben,

I realized that you are missing *jfreechart* jar in classpath, is it not
included with TPP_Setup_v4_4.... , check if it is available under
c:\Inetpb\tpp-bin.... if not then then you can try downloading it and set it
in classpath.

Thanks



On Fri, Sep 24, 2010 at 9:20 AM, Gerben Menschaert <
[email protected]> wrote:

> Dear all,
>
> Is anybody using the QualScore module within the TPP? Is it still in
> use?
>
> Running it gave me the following error:
>
>  run_in c:/Inetpub/wwwroot/ISB/data; java -jar c:\Inetpub\tpp-bin
> \qualscore.jar  -c 1.0 -p 0.1 F026703.pep.xml
>
> --------------------------------------------------------------------------------
>
> java.lang.NoClassDefFoundError: org/jfree/data/SeriesDataset
> Caused by: java.lang.ClassNotFoundException:
> org.jfree.data.SeriesDataset
>        at java.net.URLClassLoader$1.run(Unknown Source)
>        at java.security.AccessController.doPrivileged(Native Method)
>        at java.net.URLClassLoader.findClass(Unknown Source)
>        at java.lang.ClassLoader.loadClass(Unknown Source)
>        at sun.misc.Launcher$AppClassLoader.loadClass(Unknown Source)
>        at java.lang.ClassLoader.loadClass(Unknown Source)
> Could not find the main class:
> org.systemsbiology.qualscore.commandline.Main. Program will exit.
> Exception in thread "main"
> command "java -jar c:\Inetpub\tpp-bin\qualscore.jar -c 1.0 -p 0.1
> F026703.pep.xml" failed: Operation not permitted
> Command FAILED
>
>
> I'm using the latest version of the TPP version
> (TPP_Setup_v4_4_VUVUZELA_rev_1_RC2.exe).
>
>
> Many thanks in advance,
> Kind regards,
> Gr.ben
>
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