It is also important to know which version of JFreechart is used by qualscore.
Quick view of qualscore main class shows import of "org.jfree.data.SeriesDataset' which I was able to find in "jfreechart-0.9.19" but other import (org.jfree.chart.Marker) was not available. When I tried latest version "jfreechart-1.0.13", main class of qualscore was not able to find number of the imports ( org.jfree.chart.Marker, org.jfree.data.CombinedDataset, org.jfree.data.SeriesDataset... etc.) Thanks Vishal On Fri, Sep 24, 2010 at 2:33 PM, Vishal Swaroop <[email protected]>wrote: > Hi Gerben, > > I realized that you are missing *jfreechart* jar in classpath, is it not > included with TPP_Setup_v4_4.... , check if it is available under > c:\Inetpb\tpp-bin.... if not then then you can try downloading it and set it > in classpath. > > Thanks > > > > On Fri, Sep 24, 2010 at 9:20 AM, Gerben Menschaert < > [email protected]> wrote: > >> Dear all, >> >> Is anybody using the QualScore module within the TPP? Is it still in >> use? >> >> Running it gave me the following error: >> >> run_in c:/Inetpub/wwwroot/ISB/data; java -jar c:\Inetpub\tpp-bin >> \qualscore.jar -c 1.0 -p 0.1 F026703.pep.xml >> >> -------------------------------------------------------------------------------- >> >> java.lang.NoClassDefFoundError: org/jfree/data/SeriesDataset >> Caused by: java.lang.ClassNotFoundException: >> org.jfree.data.SeriesDataset >> at java.net.URLClassLoader$1.run(Unknown Source) >> at java.security.AccessController.doPrivileged(Native Method) >> at java.net.URLClassLoader.findClass(Unknown Source) >> at java.lang.ClassLoader.loadClass(Unknown Source) >> at sun.misc.Launcher$AppClassLoader.loadClass(Unknown Source) >> at java.lang.ClassLoader.loadClass(Unknown Source) >> Could not find the main class: >> org.systemsbiology.qualscore.commandline.Main. Program will exit. >> Exception in thread "main" >> command "java -jar c:\Inetpub\tpp-bin\qualscore.jar -c 1.0 -p 0.1 >> F026703.pep.xml" failed: Operation not permitted >> Command FAILED >> >> >> I'm using the latest version of the TPP version >> (TPP_Setup_v4_4_VUVUZELA_rev_1_RC2.exe). >> >> >> Many thanks in advance, >> Kind regards, >> Gr.ben >> >> -- >> You received this message because you are subscribed to the Google Groups >> "spctools-discuss" group. >> To post to this group, send email to [email protected]. >> To unsubscribe from this group, send email to >> [email protected]<spctools-discuss%[email protected]> >> . >> For more options, visit this group at >> http://groups.google.com/group/spctools-discuss?hl=en. >> >> > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
