Joe is correct. The program is called plot-msms-js.cgi and it is in 4.5.0. Easiest way to use it is to modify the url of a spectrum that you are viewing by adding the "-js" portion to it.
We have added a direct link to Lorikeet from the new PepXMLViewer, to be released with 4.5.1, due out soon! (Another thing you could do is to just rename the actual file on tpp-bin: from plot-msms-js.cgi to plot-msms.cgi -- and you would not need to play with links. I suggest backing up the original viewer in case you need to fall back to it...) --Luis On Wed, Nov 9, 2011 at 10:33 AM, Joseph Slagel < [email protected]> wrote: > Gautam, > > My understanding is that the lorikeet viewer is in 4.5 but the links as > you have observed still use the old viewer. There was some hesitation at > switching completely over to the new viewer as it still had one or two > missing features. You can still access it, but you'll need to modify your > url. I'll let someone else who knows the exact incantation chime in on it. > > -Joe > > > > On Wed, Nov 9, 2011 at 8:03 AM, Gautam Saxena <[email protected]>wrote: > >> Hi, >> >> We downloaded latest GA version of TPP 4.5 (Rapture, Rev 0) and, to >> the best of our knowledge, it is not using lorikeet when displaying >> spectra; instead, it seems to be using the old spectrum viewer. Is >> this expected behaviour? Also, we looked at all the tpp programs in >> the bin directory and couldn't find any called "lorikeet". (To look at >> the spectra of a given peptide, we clicked on a cell in the "ions" >> column of a table that displayed all the ppetides.) >> >> -- >> You received this message because you are subscribed to the Google Groups >> "spctools-discuss" group. >> To post to this group, send email to [email protected]. >> To unsubscribe from this group, send email to >> [email protected]. >> For more options, visit this group at >> http://groups.google.com/group/spctools-discuss?hl=en. >> >> > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To post to this group, send email to [email protected]. > To unsubscribe from this group, send email to > [email protected]. > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en. > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
