Hi James, Thanks for alerting us and documenting this. The next release should have this fixed (already checked into the 4.5 branch). Cheers, --Luis
On Tue, Feb 7, 2012 at 1:02 AM, sirlark <[email protected]> wrote: > Hi, > > Again for those trying to follow the tutorial, on Linux installations > especially although I'm not sure this problem doesn't happen on > windows to, I noticed that the file fileDownloader.pl is not installed > to the PATH. When trying to download the > NIST_yeast_IT_v2.0_2008-07-11.splib library under "spectraST Tools| > Download Spectral Libraries", I viewed the output of my commands and > saw this > > Command 1 [Tue Feb 7 11:01:13 2012] [ Show / Hide ] > > cd /usr/local/apps/tpp/data/dbase/speclibs/; fileDownloader.pl > NIST_yeast_IT_v2.0_2008-07-11.splib.zip > 4af25221a524b4cdb6abae792d48054e > > sh: fileDownloader.pl: not found > > Command FAILED > > You can find fileDownloader.pl in the source under $TPPSRC/ > trans_proteomic_pipeline/perl/fileDownloader.pl. I had to copy it to / > usr/local/bin, where tandem and various other binaries and other perl > scripts are installed. > > Having done this downloading libraries seems to work just fine. > > Hope this helps, > James > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To post to this group, send email to [email protected]. > To unsubscribe from this group, send email to > [email protected]. > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en. > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
