Olivier, Thanks for both maintaining and posting about your repository as its sure to be a great resource for getting X!Tandem installed quickly on Ubuntu.
Your announcement makes me wonder what the interest is in having TPP rpm's -- something I've considered in the past but never felt would be used enough to warrant the investment in time. If anyone is interested I could probably pull something together. -Joe On Tue, Feb 21, 2012 at 6:33 AM, Olivier <[email protected]> wrote: > Hello everybody, > > I am a computer scientist and I work for the PAPPSO team ( > http://pappso.inra.fr/ > ) to develop various proteomic softwares ( http://pappso.inra.fr/bioinfo > ). > > I've seen an old thread in "spctools-discuss" concerning the > installation of X!tandem under Linux and I would just like to mention > that I am maintaining some X!tandem Ubuntu packages here (that works > with Debian too) : > https://launchpad.net/~olivier-langella/+archive/ppa<https://launchpad.net/%7Eolivier-langella/+archive/ppa> > > You can easily add this repository in your sources.list with : > sudo add-apt-repository ppa:olivier-langella/ppa > sudo apt-get update > > You will then be able to install X!tandem : > sudo apt-get install xtandem-cyclone > > The latest version (X!tandem 2011.12.01.1) is currently building and > will be available soon for Oneiric Ocelot and others. > > I had to modify a little bit the orginal sources in order to compile > correctly. the same modifications I've seen in the scptools thread, > plus the use of "cmake" with autodetection of prerequisite libraries. > > Thus, the modified sources could be of interest in case you are in > trouble trying to compile X!tandem with other Linux distribution. > You can then try to download it from the PPA ( for example : > > https://launchpad.net/~olivier-langella/+archive/ppa/+files/xtandem-cyclone_2010.12.01.1-9%7Enatty1.tar.gz<https://launchpad.net/%7Eolivier-langella/+archive/ppa/+files/xtandem-cyclone_2010.12.01.1-9%7Enatty1.tar.gz> > ) > untar it and then : > cd Xtandem-* > cmake . > make > make install > > You need to install cmake according to your Linux distribution, cmake > will try to autodetect external libraries needed by X!tandem (pthread > and expat) and configure it (at least, it should ;-)). > > I hope this could be usefull to someone else. > Thanks > > Olivier > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To post to this group, send email to [email protected]. > To unsubscribe from this group, send email to > [email protected]. > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en. > > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
