Greetings, I'm working on a project which involves setting up a peptide identification platform. I'm interested in using SpectraST for the purpose of creating my own library of MSMS data, as well as creating consensus spectra.
However, I want to be able to use the database for unannotated data, i.e. data that has no accession number or amino acid sequence. In other words, I want to be able to import data into my library basically from a raw data file. As far as I've understood the workings of the consensus building procedure, step one is to look for similar identities from e.g. Mascot. This would not be possible when working with unannotated data, so my idea is to modify the way this works to make it work. What would be the easiest way to to this? That is, do I need to re- write a lot of fundamental things or is it enough to modify the code in certain key-points of the workflow? Have a nice day. :) -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
