I have some large MS raw files (eg 500 GB or greater). I'd like to ideally split it into "n" mzXML files of roughly the same size so that each X!Tandem process takes roughly the same amount of time. Is there a way to accomplish this elegantly using msconvert or some other technique? (For now, the MS files are Thermo raw files; however, they may be other MS vendor formats that we can convert to mzXML using msconvert or we may have the mzXML file itself as a starting point.)
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