Hello, I have a question with respect to decoy.
The fasta files in my decoy files start as shown below, >sw|P84710_REVERSED| and my fasta files looks like as shown below >sw|P84710| Now the question is, while running the PeptideProphet step how do I tag the reversed fasta file as decoy. In simple terms what tag do I need to add in the below box for the reversed fasta file shown above? ->Use decoy hits to pin down the negative distribution. Decoy Protein names begin with: (whitespace not allowed) Thanks a lot, Srihari Sharma -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/groups/opt_out.
