Hi, is there any (known) way to generate ProteomeXchange compatible mzIdentML files from TPP results?
What I tried: mzML -> Comet -> PeptideProphet/ProteinProphet interact...prot.xml with idConvert (ProteoWizard) -> mzid However, the mzid is not standard compliant I tried to convert the Comet output with PRIDE Converter, but the conversion failed. Any hints for a workflow that produces standard conform output? Best, Robert -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at http://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
