Hi Jimmy,

It's working now! Thank you!

Best,

Alejandro

On Wednesday, August 9, 2017 at 1:18:16 AM UTC+2, Jimmy Eng wrote:
>
> Actually instead of editing all of the various source files that call this 
> translate_absolute_filesystem_path_to_relative_webserver_root_path() 
> function, just edit src/Common/util.cpp and put a "return;" on line 1206 at 
> the head of the function to effectively accomplish the same thing.
>
> Hopefully one of the other devs will chime in with a better solution.
>
> On Tue, Aug 8, 2017 at 4:09 PM, Jimmy Eng <jke...@gmail.com <javascript:>> 
> wrote:
>
>> Alejandro,
>>
>> I just had a look at this because I was going to add a long overdue minor 
>> update to the XPRESS cgi viewer and saw that I also couldn't see the images 
>> also on my linux install.  Assuming you're building from source, edit out 
>> the following line:
>>
>>   
>> translate_absolute_filesystem_path_to_relative_webserver_root_path(szImageLink);
>>
>> in the file:
>>
>>   
>> src/Quantitation/XPress/XPressPeptideUpdateParser/XPressPeptideUpdateParserMain.cpp
>>
>> See if this fixes your problem with the XPRESS cgi viewer.  The logic 
>> behind the 'translate_absolute...' function (which is in 
>> src/Common/util.cpp) doesn't make any sense with how I have my webserver 
>> and data paths setup so I'll need to chat with whoever implemented it to 
>> see how it can be changed to be compatible.  If commenting out that line 
>> works, do the same for line 1416 in the following file and see if that 
>> works for ASAPRatio.  (I haven't tested this myself.)
>>
>>    src/Quantitation/ASAPRatio/ASAPRatioPeptideCGIDisplayParser/
>> ASAPRatioPeptideCGIDisplayParserMain.cpp
>>
>> Good luck.
>>
>> Jimmy
>>
>> On Wednesday, August 2, 2017 at 8:11:22 AM UTC-7, Alejandro wrote:
>>>
>>> Dear all,
>>>
>>> I just upgraded to TPP 5.0, from 4.8. Uninstalled everything and started 
>>> with a clean installation. Everything thing seems to work except the images 
>>> generated by gnuplot for XPRESS or ASAPratios. The peptideprophet models 
>>> images are all generated. I have search the group but have not found 
>>> something in recent TPPs version. I found something similar but in early 
>>> version ~3 and others mainly in Linux in which the problem was an outdated 
>>> gnuplot version.
>>>
>>> The other thing that is not working is the legacy viewer. It seems to be 
>>> able to "access" it but just generates a blank page.
>>>
>>> Any clue how to solve this? 
>>>
>>> I already installed the dev version and doesn't seem to solve this issue
>>>
>>> The plots of the quantitation are quite important for me to be able to 
>>> QC the reported ratios.
>>>
>>> Thanks!
>>>
>>> Alejandro
>>>
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>

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