This is what I try to find out at the moment. head and tail look fine. The DB consists of 3 individual DBs. 2 of them look fine. The UniRef50 could be the problem but I cannot check it manually. Information about the "strange" output would help.
Robert Winkler E // [email protected] (https://link.getmailspring.com/link/[email protected]/0?redirect=mailto%3Arobert.winkler%40bioprocess.org&recipient=c3BjdG9vbHMtZGlzY3Vzc0Bnb29nbGVncm91cHMuY29t) P // +49-(0) 174 73 23 117 (Signal.org) (https://link.getmailspring.com/link/[email protected]/1?redirect=tel%3A%2B49-(0)%20174%2073%2023%20117%20(Signal.org)&recipient=c3BjdG9vbHMtZGlzY3Vzc0Bnb29nbGVncm91cHMuY29t) On Nov 20 2018, at 4:31 pm, Eric Deutsch <[email protected]> wrote: > > Hi Robert, I think this warning comes when the FASTA database has unexpected > characters in it. Is there anything unusual about the FASTA database you’re > using? Unusual spaces or something? > > Regards, > Eric > > > From: [email protected] > (https://link.getmailspring.com/link/[email protected]/2?redirect=mailto%3Aspctools-discuss%40googlegroups.com&recipient=c3BjdG9vbHMtZGlzY3Vzc0Bnb29nbGVncm91cHMuY29t) > <[email protected] > (https://link.getmailspring.com/link/[email protected]/3?redirect=mailto%3Aspctools-discuss%40googlegroups.com&recipient=c3BjdG9vbHMtZGlzY3Vzc0Bnb29nbGVncm91cHMuY29t)> > On Behalf Of Robert > Sent: Tuesday, November 20, 2018 5:50 AM > To: spctools-discuss <[email protected] > (https://link.getmailspring.com/link/[email protected]/4?redirect=mailto%3Aspctools-discuss%40googlegroups.com&recipient=c3BjdG9vbHMtZGlzY3Vzc0Bnb29nbGVncm91cHMuY29t)> > Subject: [spctools-discuss] TPP 5.2 ProteinProphet WARNING: Trying to compute > mass of non-residue: > > > > Hi, I am testing the docker version of TPP 5.2 on Windows 10, > works fine so far, but in the ProteinProphet step appears a warning (I > stopped the script after several minutes of the warning message running). > WARNING: Trying to compute mass of non-residue: > WARNING: Trying to compute mass of non-residue: > WARNING: Trying to compute mass of non-residue: > WARNING: Trying to compute mass of non-residue: > WARNING: Trying to compute mass of non-residue: > Any idea how to track down the error (I suppose a strange symbol??)? > Best, Robert > > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected] > (https://link.getmailspring.com/link/[email protected]/5?redirect=mailto%3Aspctools-discuss%2Bunsubscribe%40googlegroups.com&recipient=c3BjdG9vbHMtZGlzY3Vzc0Bnb29nbGVncm91cHMuY29t). > To post to this group, send email to [email protected] > (https://link.getmailspring.com/link/[email protected]/6?redirect=mailto%3Aspctools-discuss%40googlegroups.com&recipient=c3BjdG9vbHMtZGlzY3Vzc0Bnb29nbGVncm91cHMuY29t). > Visit this group at https://groups.google.com/group/spctools-discuss > (https://link.getmailspring.com/link/[email protected]/7?redirect=https%3A%2F%2Fgroups.google.com%2Fgroup%2Fspctools-discuss&recipient=c3BjdG9vbHMtZGlzY3Vzc0Bnb29nbGVncm91cHMuY29t). > For more options, visit https://groups.google.com/d/optout > (https://link.getmailspring.com/link/[email protected]/8?redirect=https%3A%2F%2Fgroups.google.com%2Fd%2Foptout&recipient=c3BjdG9vbHMtZGlzY3Vzc0Bnb29nbGVncm91cHMuY29t). > > > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected] > (https://link.getmailspring.com/link/[email protected]/9?redirect=mailto%3Aspctools-discuss%2Bunsubscribe%40googlegroups.com&recipient=c3BjdG9vbHMtZGlzY3Vzc0Bnb29nbGVncm91cHMuY29t). > To post to this group, send email to [email protected] > (https://link.getmailspring.com/link/[email protected]/10?redirect=mailto%3Aspctools-discuss%40googlegroups.com&recipient=c3BjdG9vbHMtZGlzY3Vzc0Bnb29nbGVncm91cHMuY29t). > Visit this group at https://groups.google.com/group/spctools-discuss > (https://link.getmailspring.com/link/[email protected]/11?redirect=https%3A%2F%2Fgroups.google.com%2Fgroup%2Fspctools-discuss&recipient=c3BjdG9vbHMtZGlzY3Vzc0Bnb29nbGVncm91cHMuY29t). > For more options, visit https://groups.google.com/d/optout > (https://link.getmailspring.com/link/[email protected]/12?redirect=https%3A%2F%2Fgroups.google.com%2Fd%2Foptout&recipient=c3BjdG9vbHMtZGlzY3Vzc0Bnb29nbGVncm91cHMuY29t). > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To post to this group, send email to [email protected]. Visit this group at https://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
