As a bonus of debugging this, the reproducible builds have fallen out as well.
The patch that I use works (that is what was tested above) and it is stable in 
its binaries across 10 builds:

md5sum 0*/usr/lib/x86_64-linux-gnu/libSDL2-2.0.so.0*.objdump
cd47f413db025e99b4d888e84fac4a31  
00/usr/lib/x86_64-linux-gnu/libSDL2-2.0.so.0.3000.9.objdump
cd47f413db025e99b4d888e84fac4a31  
01/usr/lib/x86_64-linux-gnu/libSDL2-2.0.so.0.3000.9.objdump
cd47f413db025e99b4d888e84fac4a31  
02/usr/lib/x86_64-linux-gnu/libSDL2-2.0.so.0.3000.9.objdump
cd47f413db025e99b4d888e84fac4a31  
03/usr/lib/x86_64-linux-gnu/libSDL2-2.0.so.0.3000.9.objdump
cd47f413db025e99b4d888e84fac4a31  
04/usr/lib/x86_64-linux-gnu/libSDL2-2.0.so.0.3000.9.objdump
cd47f413db025e99b4d888e84fac4a31  
05/usr/lib/x86_64-linux-gnu/libSDL2-2.0.so.0.3000.9.objdump
cd47f413db025e99b4d888e84fac4a31  
06/usr/lib/x86_64-linux-gnu/libSDL2-2.0.so.0.3000.9.objdump
cd47f413db025e99b4d888e84fac4a31  
07/usr/lib/x86_64-linux-gnu/libSDL2-2.0.so.0.3000.9.objdump
cd47f413db025e99b4d888e84fac4a31  
08/usr/lib/x86_64-linux-gnu/libSDL2-2.0.so.0.3000.9.objdump
cd47f413db025e99b4d888e84fac4a31  
09/usr/lib/x86_64-linux-gnu/libSDL2-2.0.so.0.3000.9.objdump

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https://bugs.launchpad.net/bugs/2089779

Title:
  Buffer overflow in autopkgtest of wesnoth

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