Hi All,
I'm trying out ytex within cTAKES 3.2. I followed all the instructions
listed here :
https://cwiki.apache.org/confluence/display/CTAKES/YTEX+Installation, and I
verified that the setup was fine (from setup.out).
My ytex.properties file contains the line:
ytex.conceptGraphName=sct-umls
and I do have sct-umls.xml in my
${CTAKES_HOME}/resources/org/apache/ctakes/ytex/conceptGraph.
Despite all this I can't seem to get conceptGraph working. The error
message is the following:
05 Nov 2014 11:56:31 INFO ConceptSimilarityServiceImpl - begin
initialization for concept graph: sct-umls
05 Nov 2014 11:56:31 INFO ConceptDaoImpl - could not load conceptGraph
from classpath, attempt to load from:
/usr/local/apache-ctakes-3.2.0/resources/org/apache/ctakes/ytex/conceptGraph/sct-umls
.gz
05 Nov 2014 11:56:31 INFO ConceptDaoImpl -
/usr/local/apache-ctakes-3.2.0/resources/org/apache/ctakes/ytex/conceptGraph/sct-umls
.gz not found, cannot load concept graph
I don't understand what needs to go into CLASSPATH to indicate where
conceptGraph is, as it already contains ${CTAKES_HOME}/resources. My class
path is set according to the documentation to:
${CTAKES_HOME}/desc:/${CTAKES_HOME}/resources:${CTAKES_HOME}/lib/*
Any help would be appreciated.
Natalia
