Yes, I did the step and I do see that file in resources/org/apache/ctakes/ytex/conceptGraph.
On Wed, Nov 5, 2014 at 1:59 PM, vijay garla <[email protected]> wrote: > did you do this part (see below). If so, you should see the file > sct-umls.gz in resources/org/apache/ctakes/ytex/conceptGraph/ > > > 3) Unzip YTEX Resources (Optional - UTS login required) > > Download and unzip ctakes-ytex-resources-3.1.2-SNAPSHOT.zip > <http://www.ytex-nlp.org/umls.download/secure/3.1/ctakes-ytex-resources-3.1.2-SNAPSHOT.zip> > 'over' > your installation. This contains: > > - Concept Graphs derived from the UMLS2013AA used to compute semantic > similarity measures > - Dictionary Lookup table derived from UMLS2013AA for named entity > recognition. > > > On Wed, Nov 5, 2014 at 6:01 PM, Natalia Connolly < > [email protected]> wrote: > >> Hi All, >> >> I'm trying out ytex within cTAKES 3.2. I followed all the >> instructions listed here : >> https://cwiki.apache.org/confluence/display/CTAKES/YTEX+Installation, >> and I verified that the setup was fine (from setup.out). >> >> My ytex.properties file contains the line: >> >> ytex.conceptGraphName=sct-umls >> >> and I do have sct-umls.xml in my >> ${CTAKES_HOME}/resources/org/apache/ctakes/ytex/conceptGraph. >> >> Despite all this I can't seem to get conceptGraph working. The error >> message is the following: >> >> 05 Nov 2014 11:56:31 INFO ConceptSimilarityServiceImpl - begin >> initialization for concept graph: sct-umls >> 05 Nov 2014 11:56:31 INFO ConceptDaoImpl - could not load conceptGraph >> from classpath, attempt to load from: >> /usr/local/apache-ctakes-3.2.0/resources/org/apache/ctakes/ytex/conceptGraph/sct-umls >> .gz >> 05 Nov 2014 11:56:31 INFO ConceptDaoImpl - >> /usr/local/apache-ctakes-3.2.0/resources/org/apache/ctakes/ytex/conceptGraph/sct-umls >> .gz not found, cannot load concept graph >> >> I don't understand what needs to go into CLASSPATH to indicate where >> conceptGraph is, as it already contains ${CTAKES_HOME}/resources. My class >> path is set according to the documentation to: >> >> ${CTAKES_HOME}/desc:/${CTAKES_HOME}/resources:${CTAKES_HOME}/lib/* >> >> Any help would be appreciated. >> >> Natalia >> >> >> >> >
