You can download it from their svn repository. Please use following url to get latest version
http://ctakes.apache.org/downloads.cgi Sent from Samsung Mobile -------- Original message -------- From: Justin Zhang <[email protected]> Date:15/07/2015 7:45 PM (GMT+05:30) To: [email protected] Subject: Re: corresponding versions ctakes and stakes-resource Hello Akhilesh, Thank you for quick response. What is the link to download 3.2.2-SNAPSHOT? and What version of ctakes resource did you use? Is it different from https://www.apache.org/dist/ctakes/ctakes-3.2.2/apache-ctakes-3.2.2-bin.tar.gz? I tried this one and with ctakes resource 3.2.1.1. It did not for these 3 pipelines. Justin On Wed, Jul 15, 2015 at 9:03 AM, Akhilesh Patel <[email protected]> wrote: Hi Justin, I have not worked on smoking status however I am able to capture “Side effects” and “Drug annotation” information from clinical notes. Both the module working form me. I am using following xml files to extract the information <delegateAnalysisEngine key="DrugMentionAnnotator"> <import location="../../ctakes/ctakes-drug-ner/desc/analysis_engine/DrugMentionAnnotator.xml"/> </delegateAnalysisEngine> <delegateAnalysisEngine key="SideEffect"> <import location="../../ctakes/ctakes-side-effect/desc/analysis_engine/SideEffectAggregateTAE.xml"/> </delegateAnalysisEngine> Ctakes version I am using is 3.2.2-SNAPSHOT. Thanks, Akhilesh From: Justin Zhang [mailto:[email protected]] Sent: Wednesday, July 15, 2015 7:22 PM To: [email protected] Subject: Re: corresponding versions ctakes and stakes-resource Hello again, For the same purpose as the first email: I have put a lot of efforts in order to run this few pipelines with different versions ctakes/resources and different computer systems, and did not succeed. Most errors are "URIs" or "File (xml) not found". I am so eager to move forward. Could anyone help me through the steps for "Smoking Status", and then "Side effects"/"Drug Annotations"? I would need the information of specific ctakes binary version and correct match resources, and relevant necessary steps. Great appreciation!!! Justin On Tue, Jul 14, 2015 at 4:04 PM, Justin Zhang <[email protected]> wrote: Hello Everyone, I am looking to load following AE (analysis engine) from runctakesCVD.sh · <cTAKES_HOME>/desc/ctakes-smoking-status/desc/analysis_engine/SimulatedProdSmokingTAE.xml (The annotator to obtain document or patient-level smoking status) · <cTAKES_HOME>/desc/ctakes-side-effect/desc/analysis_engine/SideEffectAggregateTAE_UMLS.xml (The annotator to find side effect mentions and sentences from clinical documents) · <cTAKES_HOME>/desc/ctakes-drug-ner/desc/analysis_engine/DrugAggregatePlaintextUMLSProcesor.xml (The annotator to obtain drug annotations) What corresponding ctakes binary and ctakes resource should I use? In download page, current resource versions are 3.0.1, 3.10, 3.13, 3.2.0, 3.2.1.1 current ctakes versions are 3.1.0, 3.1.1, 3.2.0, 3.2.1, 3.2.2 thanks, -- Justin -- Justin =========================================================================================================================================================================================== DISCLAIMER: The information contained in this message (including any attachments) is confidential and may be privileged. If you have received it by mistake please notify the sender by return e-mail and permanently delete this message and any attachments from your system. Any dissemination, use, review, distribution, printing or copying of this message in whole or in part is strictly prohibited. Please note that e-mails are susceptible to change. CitiusTech shall not be liable for the improper or incomplete transmission of the information contained in this communication nor for any delay in its receipt or damage to your system. CitiusTech does not guarantee that the integrity of this communication has been maintained or that this communication is free of viruses, interceptions or interferences. ==================================================================================================================================================================== -- Justin =========================================================================================================================================================================================== DISCLAIMER: The information contained in this message (including any attachments) is confidential and may be privileged. If you have received it by mistake please notify the sender by return e-mail and permanently delete this message and any attachments from your system. Any dissemination, use, review, distribution, printing or copying of this message in whole or in part is strictly prohibited. Please note that e-mails are susceptible to change. CitiusTech shall not be liable for the improper or incomplete transmission of the information contained in this communication nor for any delay in its receipt or damage to your system. CitiusTech does not guarantee that the integrity of this communication has been maintained or that this communication is free of viruses, interceptions or interferences. ====================================================================================================================================================================
