Thanks. Is this with gcc in the default location (/usr/bin/gcc) or elsewhere? It may not be relevant, but I built v4.7.2 and installed it outside of the system area:
[appmaint@bb2login04 openmpi-1.6.3]$ which gcc /gpfs/apps/gcc/v4.7.2/bin/gcc [appmaint@bb2login04 openmpi-1.6.3]$ gcc -v Using built-in specs. COLLECT_GCC=gcc COLLECT_LTO_WRAPPER=/gpfs/apps/gcc/v4.7.2/libexec/gcc/x86_64-unknown-linux-gnu/4.7.2/lto-wrapper Target: x86_64-unknown-linux-gnu Configured with: ./configure --prefix=/gpfs/apps/gcc/v4.7.2 --disable-multilib Thread model: posix gcc version 4.7.2 (GCC) [appmaint@bb2login04 openmpi-1.6.3]$ module unload apps/gcc [appmaint@bb2login04 openmpi-1.6.3]$ which gcc /usr/bin/gcc clutching at straws a bit here ... but I have built it with Intel 2013.0.079 which is also installed in the applications area and loaded with a module. -- Paul Hatton High Performance Computing and Visualisation Specialist IT Services, The University of Birmingham Ph: 0121-414-3994 Mob: 07785-977340 Skype: P.S.Hatton [Service Manager, Birmingham Environment for Academic Research] [Also Technical Director, IBM Visual and Spatial Technology Centre] > -----Original Message----- > From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On > Behalf Of Gunter, David O > Sent: 06 December 2012 21:06 > To: Open MPI Users > Subject: Re: [OMPI users] error configuring OpenMPI 1.6.3 with gcc > 4.7.2 > > I just tried with the following: > > $ gcc --version > gcc (GCC) 4.7.2 > Copyright (C) 2012 Free Software Foundation, Inc. > This is free software; see the source for copying conditions. There is > NO > warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR > PURPOSE. > > $ ./configure --prefix=/tmp/dog/openmpi/1.6.3-gcc-4.7.2 F77=gfortran > FC=gfortran CC=gcc CXX=c++ --with- > platform=contrib/platform/lanl/tlcc2/optimized-panasas 2>&1 | tee > test.log > > configure completed without error as did the subsequent make. > > Here's the relevant part of the configure output: > > ... > checking Fortran 90 kind of MPI_INTEGER_KIND (selected_int_kind(9))... > 4 > checking Fortran 90 kind of MPI_ADDRESS_KIND (selected_int_kind(18))... > 8 > checking Fortran 90 kind of MPI_OFFSET_KIND (selected_int_kind(18))... > (cached) 8 > ... > > -- > David Gunter > HPC-3: Infrastructure Team > Los Alamos National Laboratory > > > > > On Dec 6, 2012, at 1:42 PM, Paul Hatton wrote: > > > I've searched the FAQ but not come up with anything about this ... > with OpenMPI 1.6.3 and gcc 4.7.2, when I > > > > ./configure --prefix=/gpfs/apps/openmpi/1.6.3/gcc_4.7.2-tm-ib \ > > F77=gfortran FC=gfortran CC=gcc CXX=c++ \ > > --with-tm=/gpfs/sysapps/torque/4.1.2 \ > > --with-openib \ > > 2>&1|tee ../logs/configure-`date +%y_%m_%d_%Hh%Mm`.log > > > > configure fails with > > > > checking Fortran 90 kind of MPI_INTEGER_KIND > (selected_int_kind(9))... > > configure: error: Could not determine kind of > selected_int_kind(MPI_INTEGER_KIND) > > > > Has anyone built 1.6.3 with gcc 4.7.2? It build fine with Intel > 2013.0.079 and also the system (Scientific Linux 6.3) gcc which is > 4.4.6 > > > > I've attached the output from the configure command. > > > > Thanks > > > > -- > > Paul Hatton > > High Performance Computing and Visualisation Specialist > > IT Services, The University of Birmingham > > Ph: 0121-414-3994 Mob: 07785-977340 Skype: P.S.Hatton > > [Service Manager, Birmingham Environment for Academic Research] > > [Also Technical Director, IBM Visual and Spatial Technology Centre] > > > > <configure- > 12_12_06_19h48m.log>_______________________________________________ > > users mailing list > > us...@open-mpi.org > > http://www.open-mpi.org/mailman/listinfo.cgi/users > > > _______________________________________________ > users mailing list > us...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/users
