It looks like your gfortran compiler is broken...? configure:53489: checking Fortran 90 kind of MPI_INTEGER_KIND (selected_int_kind(9)) configure:53507: gfortran -o conftest conftestf.f90 configure:53514: $? = 0 configure:53554: ./conftest ./conftest: /usr/lib64/libgfortran.so.3: version `GFORTRAN_1.4' not found (required by ./conftest) configure:53561: $? = 1
On Dec 6, 2012, at 1:22 PM, Paul Hatton wrote: > failed one attached. > > -- > Paul Hatton > High Performance Computing and Visualisation Specialist > IT Services, The University of Birmingham > Ph: 0121-414-3994 Mob: 07785-977340 Skype: P.S.Hatton > [Service Manager, Birmingham Environment for Academic Research] > [Also Technical Director, IBM Visual and Spatial Technology Centre] > > >> -----Original Message----- >> From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On >> Behalf Of Jeff Squyres >> Sent: 06 December 2012 21:17 >> To: Open MPI Users >> Subject: Re: [OMPI users] error configuring OpenMPI 1.6.3 with gcc >> 4.7.2 >> >> This does not appear to be the right config.log -- the test in question >> passed: >> >> configure:53489: checking Fortran 90 kind of MPI_INTEGER_KIND >> (selected_int_kind(9)) >> configure:53507: gfortran -o conftest conftestf.f90 >> configure:53514: $? = 0 >> >> >> >> On Dec 6, 2012, at 1:11 PM, Paul Hatton wrote: >> >>> Thanks. zip-ed config.log attached >>> >>> -- >>> Paul Hatton >>> High Performance Computing and Visualisation Specialist >>> IT Services, The University of Birmingham >>> Ph: 0121-414-3994 Mob: 07785-977340 Skype: P.S.Hatton >>> [Service Manager, Birmingham Environment for Academic Research] >>> [Also Technical Director, IBM Visual and Spatial Technology Centre] >>> >>> >>>> -----Original Message----- >>>> From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] >> On >>>> Behalf Of Jeff Squyres >>>> Sent: 06 December 2012 20:54 >>>> To: Open MPI Users >>>> Subject: Re: [OMPI users] error configuring OpenMPI 1.6.3 with gcc >>>> 4.7.2 >>>> >>>> I have not tested with gfortran 4.7.2. >>>> >>>> Can you send the config.log file? (please compress) >>>> >>>> >>>> On Dec 6, 2012, at 12:42 PM, Paul Hatton wrote: >>>> >>>>> I've searched the FAQ but not come up with anything about this ... >>>> with OpenMPI 1.6.3 and gcc 4.7.2, when I >>>>> >>>>> ./configure --prefix=/gpfs/apps/openmpi/1.6.3/gcc_4.7.2-tm-ib \ >>>>> F77=gfortran FC=gfortran CC=gcc CXX=c++ \ >>>>> --with-tm=/gpfs/sysapps/torque/4.1.2 \ >>>>> --with-openib \ >>>>> 2>&1|tee ../logs/configure-`date +%y_%m_%d_%Hh%Mm`.log >>>>> >>>>> configure fails with >>>>> >>>>> checking Fortran 90 kind of MPI_INTEGER_KIND >>>> (selected_int_kind(9))... >>>>> configure: error: Could not determine kind of >>>> selected_int_kind(MPI_INTEGER_KIND) >>>>> >>>>> Has anyone built 1.6.3 with gcc 4.7.2? It build fine with Intel >>>> 2013.0.079 and also the system (Scientific Linux 6.3) gcc which is >>>> 4.4.6 >>>>> >>>>> I've attached the output from the configure command. >>>>> >>>>> Thanks >>>>> >>>>> -- >>>>> Paul Hatton >>>>> High Performance Computing and Visualisation Specialist >>>>> IT Services, The University of Birmingham >>>>> Ph: 0121-414-3994 Mob: 07785-977340 Skype: P.S.Hatton >>>>> [Service Manager, Birmingham Environment for Academic Research] >>>>> [Also Technical Director, IBM Visual and Spatial Technology Centre] >>>>> >>>>> <configure- >>>> 12_12_06_19h48m.log>_______________________________________________ >>>>> users mailing list >>>>> us...@open-mpi.org >>>>> http://www.open-mpi.org/mailman/listinfo.cgi/users >>>> >>>> >>>> -- >>>> Jeff Squyres >>>> jsquy...@cisco.com >>>> For corporate legal information go to: >>>> http://www.cisco.com/web/about/doing_business/legal/cri/ >>>> >>>> >>>> _______________________________________________ >>>> users mailing list >>>> us...@open-mpi.org >>>> http://www.open-mpi.org/mailman/listinfo.cgi/users >>> >>> >>> >> *********************************************************************** >> ****** >>> ** >> ** >>> ** WARNING: This email contains an attachment of a very suspicious >> type. ** >>> ** You are urged NOT to open this attachment unless you are >> absolutely ** >>> ** sure it is legitimate. Opening this attachment may cause >> irreparable ** >>> ** damage to your computer and your files. If you have any questions >> ** >>> ** about the validity of this message, PLEASE SEEK HELP BEFORE >> OPENING IT. ** >>> ** >> ** >>> ** This warning was added by the IU Computer Science Dept. mail >> scanner. ** >>> >> *********************************************************************** >> ****** >>> >>> >>> <config.zip>_______________________________________________ >>> users mailing list >>> us...@open-mpi.org >>> http://www.open-mpi.org/mailman/listinfo.cgi/users >> >> >> -- >> Jeff Squyres >> jsquy...@cisco.com >> For corporate legal information go to: >> http://www.cisco.com/web/about/doing_business/legal/cri/ >> >> >> _______________________________________________ >> users mailing list >> us...@open-mpi.org >> http://www.open-mpi.org/mailman/listinfo.cgi/users > > > ***************************************************************************** > ** ** > ** WARNING: This email contains an attachment of a very suspicious type. ** > ** You are urged NOT to open this attachment unless you are absolutely ** > ** sure it is legitimate. Opening this attachment may cause irreparable ** > ** damage to your computer and your files. If you have any questions ** > ** about the validity of this message, PLEASE SEEK HELP BEFORE OPENING IT. ** > ** ** > ** This warning was added by the IU Computer Science Dept. mail scanner. ** > ***************************************************************************** > > > <config.zip>_______________________________________________ > users mailing list > us...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/users -- Jeff Squyres jsquy...@cisco.com For corporate legal information go to: http://www.cisco.com/web/about/doing_business/legal/cri/
