Hi all, i'm trying to install Vocta 1.2 release, i'm using CMake 2.8.5 for it. After typing "make" an error appears while generating csg_inverse:
..... [ 64%] Built target csg_property_manpage Linking CXX executable csg_resample [ 66%] Built target csg_resample [ 66%] Generating csg_resample.man [ 67%] Built target csg_resample_manpage Linking CXX executable csg_dump [ 68%] Built target csg_dump [ 68%] Generating csg_dump.man [ 70%] Built target csg_dump_manpage [ 70%] Built target csg_inverse [ 70%] Generating csg_inverse.man Unknown option '--show-share' make[2]: *** [scripts/csg_inverse.man] Error 1 make[1]: *** [scripts/CMakeFiles/csg_inverse_manpage.dir/all] Error 2 make: *** [all] Error 2 Somebody has a clue how can i solve this issue??? Thanks so much in advance. Sacha On Jul 15, 1:10 pm, Christoph Junghans <[email protected]> wrote: > Welcome, > > Some versions of cmake are critical, cmake 2.6.4 works as well. > > Cheers, > > Christoph > > 2011/7/15 Javier Ramos <[email protected]>: > > > Dear Christoph, > > > You are right!!!!. I have updated the cmake version from 2.8.1 to > > 2.8.4 and now the compilation is fine. > > > Thank you very much for your kind help. > > Cheers, > > > Javi > > > On 15 jul, 11:14, Christoph Junghans <[email protected]> wrote: > >> Hi Javier, > > >> I remember having a similar problem with an older version of cmake. > >> Which version of cmake are you using? > >> ($cmake --version) > > >> Cheers, > > >> Christoph > > >> 2011/7/15 Javier Ramos <[email protected]>: > > >> > Dear developers and users, > > >> > I am trying to build the votca package following the instructions on > >> > the web page. However, I have some problems which I am not able to > >> > solve. > > >> > To do that I use the following script > > >> > >cat compiler.sh > > >> > source /home/nightrain/CODES/VOTCA/VOTCA_1.2/TMP/ > >> > gromacs-4.5.4_b/bin/GMXRC.bash > >> > prefix=`pwd` > >> > echo $prefix > >> > mkdir -p ${prefix}/src > >> > cd ${prefix}/src > >> > wgethttp://votca.googlecode.com/hg/build.sh > >> > chmod +x build.sh > >> > ./build.sh --prefix ${prefix} -j 1 --log build.log tools csg > > >> > The tools are compiled without problem but in the case of the csg > >> > package, after sometime, I get the following error: > > >> > =================================================== > >> > (...) > >> > Scanning dependencies of target csg_property > >> > [ 55%] Building CXX object src/tools/CMakeFiles/csg_property.dir/ > >> > csg_property.cc.o > >> > Linking CXX executable csg_property > >> > [ 55%] Built target csg_property > >> > Scanning dependencies of target csg_property_manpage > >> > [ 55%] Generating csg_property.man > >> > [ 57%] Built target csg_property_manpage > >> > Scanning dependencies of target csg_call > >> > Current revision is 400a0374775a > >> > [ 57%] Built target csg_call > >> > Scanning dependencies of target csg_call_manpage > >> > make[2]: *** No rule to make target `help2t2t',needed by `scripts/ > >> > help2t2t'. Stop. > >> > make[1]: *** [scripts/CMakeFiles/csg_call_manpage.dir/all] Error 2 > >> > make: *** [all] Error 2 > >> > =================================================== > > >> > Please, can someone help me to address this error? > > >> > Thanks in advance. Best regards > > >> > -------------------------------------------------------------- > >> > Dr. Javier Ramos > >> > Molecular Structure and Properties of Polymers > >> > Department of Macromolecular Physics > >> > Instituto de Estructura de la Materia (CSIC) > >> > C/ Serrano 113 bis 28006 Madrid (Spain) > >> > Voice +34 91 561 68 00 (943112) > >> > Fax +34 91 585 54 13 > >> >http://www.biophym.iem.csic.es/biophym > >> > -------------------------------------------------------------- > > >> > P.D. I paste here the content of the build.log file: > > >> > >cat build.log > > >> > Log of './build.sh --prefix /home/nightrain/CODES/VOTCA/VOTCA_1.2/ > >> > TMP4 -j 1 tools csg' > >> > This is VOTCA build.sh, version 1.6.1 > >> > prefix is '/home/nightrain/CODES/VOTCA/VOTCA_1.2/TMP4' > >> > Using 1 jobs for make > >> > Working on tools > >> > Doing checkout for tools fromhttps://tools.votca.googlecode.com/hg/ > >> > (CTRL-C to stop) 5 4 3 2 1 > >> > requesting all changes > >> > adding changesets > >> > adding manifests > >> > adding file changes > >> > added 474 changesets with 2604 changes to 1678 files (+2 heads) > >> > updating to branch default > >> > 1460 files updated, 0 files merged, 0 files removed, 0 files > >> > unresolved > >> > Switching to stable branch add --dev option to prevent that > >> > 7 files updated, 0 files merged, 0 files removed, 0 files unresolved > >> > cmake -DCMAKE_INSTALL_PREFIX=/home/nightrain/CODES/VOTCA/VOTCA_1.2/ > >> > TMP4 . > >> > -- The C compiler identification is GNU > >> > -- The CXX compiler identification is GNU > >> > -- Check for working C compiler: /usr/bin/gcc > >> > -- Check for working C compiler: /usr/bin/gcc -- works > >> > -- Detecting C compiler ABI info > >> > -- Detecting C compiler ABI info - done > >> > -- Check for working CXX compiler: /usr/bin/c++ > >> > -- Check for working CXX compiler: /usr/bin/c++ -- works > >> > -- Detecting CXX compiler ABI info > >> > -- Detecting CXX compiler ABI info - done > >> > -- Looking for include files CMAKE_HAVE_PTHREAD_H > >> > -- Looking for include files CMAKE_HAVE_PTHREAD_H - found > >> > -- Looking for pthread_create in pthreads > >> > -- Looking for pthread_create in pthreads - not found > >> > -- Looking for pthread_create in pthread > >> > -- Looking for pthread_create in pthread - found > >> > -- Found Threads: TRUE > >> > -- Found TXT2TAGS: /usr/bin/txt2tags > >> > -- Looking for assert.h > >> > -- Looking for assert.h - found > >> > -- Looking for math.h > >> > -- Looking for math.h - found > >> > -- Looking for stdio.h > >> > -- Looking for stdio.h - found-- Looking for C++ include cmath > >> > -- Looking for C++ include cmath - found > >> > -- Looking for C++ include fstream > >> > -- Looking for C++ include fstream - found > >> > -- Looking for C++ include functional > >> > -- Looking for C++ include functional - found > >> > -- Looking for C++ include iostream > >> > -- Looking for C++ include iostream - found > >> > -- Looking for C++ include limits > >> > -- Looking for C++ include limits - found > >> > -- Looking for C++ include list > >> > -- Looking for C++ include list - found > >> > -- Looking for C++ include map > >> > -- Looking for C++ include map - found > >> > -- Looking for C++ include ostream > >> > -- Looking for C++ include ostream - found > >> > -- Looking for C++ include sstream > >> > -- Looking for C++ include sstream - found > >> > -- Looking for C++ include stack > >> > -- Looking for C++ include stack - found > >> > -- Looking for C++ include stdexcept > >> > -- Looking for C++ include stdexcept - found > >> > -- Looking for C++ include string > >> > -- Looking for C++ include string - found > >> > -- Looking for C++ include vector > >> > -- Looking for C++ include vector - found > >> > -- Looking for sqrt in m > >> > -- Looking for sqrt in m - found > >> > -- Boost version: 1.40.0 > >> > -- Found the following Boost libraries: > >> > -- program_options > >> > -- Found EXPAT: /usr/lib/libexpat.so > >> > -- checking for module 'fftw3' > >> > -- found fftw3, version 3.2.2 > >> > -- Found FFTW3: /usr/lib/libfftw3.so > >> > -- Looking for fftw_plan_r2r_1d in /usr/lib/libfftw3.so > >> > -- Looking for fftw_plan_r2r_1d in /usr/lib/libfftw3.so - found > >> > -- Found CBLAS: /usr/lib/libcblas.so > >> > -- Looking for cblas_dsyrk in /usr/lib/libcblas.so > >> > -- Looking for cblas_dsyrk in /usr/lib/libcblas.so - found > >> > -- checking for module 'gsl' > >> > -- found gsl, version 1.13 > >> > -- Found GSL: /usr/lib/libgsl.so > >> > -- Looking for gsl_linalg_QR_decomp in /usr/lib/libgsl.so;/usr/lib/ > >> > libcblas.so > >> > -- Looking for gsl_linalg_QR_decomp in /usr/lib/libgsl.so;/usr/lib/ > >> > libcblas.so - found > >> > -- checking for module 'sqlite3' > >> > -- found sqlite3, version 3.6.22 > >> > -- Found SQLITE3: /usr/lib/libsqlite3.so > >> > -- Found Doxygen: /usr/bin/doxygen > >> > -- Configuring done > >> > -- Generating done > >> > -- Build files have been written to: /home/nightrain/CODES/VOTCA/ > >> > VOTCA_1.2/TMP4/src/tools > >> > buidling tools > >> > Scanning dependencies of target changelog > >> > [ 0%] Building CHANGELOG using txt2tags > >> > [ 3%] Built target changelog > >> > Scanning dependencies of target hgversion > >> > [ 3%] Built target hgversion > >> > Scanning dependencies of target manpages > >> > [ 3%] Building votca_tools manpage > >> > [ 7%] Built target manpages > >> > Scanning dependencies of target votca_tools > >> > [ 11%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > linalg.cc.o > >> > [ 14%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > matrix.cc.o > >> > [ 18%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > histogramnew.cc.o > >> > [ 22%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > spline.cc.o > >> > [ 25%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > random.cc.o > >> > [ 29%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > mutex.cc.o > >> > [ 33%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > rangeparser.cc.o > >> > [ 37%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > crosscorrelate.cc.o > >> > [ 40%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > tokenizer.cc.o > >> > [ 44%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > akimaspline.cc.o > >> > [ 48%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > parcer.cc.o > >> > [ 51%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > parsexml.cc.o > >> > [ 55%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > correlate.cc.o > >> > [ 59%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > linspline.cc.o > >> > [ 62%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > table.cc.o > >> > [ 66%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > cubicspline.cc.o > >> > [ 70%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > histogram.cc.o > >> > [ 74%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > thread.cc.o > >> > [ 77%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > datacollection.cc.o > >> > [ 81%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > property.cc.o > >> > [ 85%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > application.cc.o > >> > [ 88%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > version.cc.o > >> > [ 92%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > database.cc.o > >> > [ 96%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> > statement.cc.o > >> > Linking CXX shared library libvotca_tools.so > >> > [ 96%] Built target votca_tools > >> > Scanning dependencies of target linktest > >> > [100%] > > ... > > read more » -- You received this message because you are subscribed to the Google Groups "votca" group. 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