Thanks a lot Christoph, i started all over again and managed to install Votca. After running ./ build.sh a syntax error appeared while building csg_inverse. I just edited the csg_inverse file from csg scripts folder, line 23 instead of "the+" i put "then". Then i ran ./build.sh again and everything went fine.
Many regards, Sacha On Jul 26, 1:16 pm, Christoph Junghans <[email protected]> wrote: > Hi Sacha, > > this seems to be a problem if there is an old very still installed. > Uninstall (remove) the old version first. If you are using build.sh > add the '--clean-out' option. > > I will fix that in the next release! > > Cheers, > > Christoph > > 2011/7/26 Sacha Mould <[email protected]>: > > > Hi all, > > > i'm trying to install Vocta 1.2 release, i'm using CMake 2.8.5 for it. > > After typing "make" an error appears while generating csg_inverse: > > > ..... > > > [ 64%] Built target csg_property_manpage > > Linking CXX executable csg_resample > > [ 66%] Built target csg_resample > > [ 66%] Generating csg_resample.man > > [ 67%] Built target csg_resample_manpage > > Linking CXX executable csg_dump > > [ 68%] Built target csg_dump > > [ 68%] Generating csg_dump.man > > [ 70%] Built target csg_dump_manpage > > [ 70%] Built target csg_inverse > > [ 70%] Generating csg_inverse.man > > Unknown option '--show-share' > > make[2]: *** [scripts/csg_inverse.man] Error 1 > > make[1]: *** [scripts/CMakeFiles/csg_inverse_manpage.dir/all] Error 2 > > make: *** [all] Error 2 > > > Somebody has a clue how can i solve this issue??? > > > Thanks so much in advance. > > > Sacha > > > On Jul 15, 1:10 pm, Christoph Junghans <[email protected]> wrote: > >> Welcome, > > >> Some versions of cmake are critical, cmake 2.6.4 works as well. > > >> Cheers, > > >> Christoph > > >> 2011/7/15 Javier Ramos <[email protected]>: > > >> > Dear Christoph, > > >> > You are right!!!!. I have updated the cmake version from 2.8.1 to > >> > 2.8.4 and now the compilation is fine. > > >> > Thank you very much for your kind help. > >> > Cheers, > > >> > Javi > > >> > On 15 jul, 11:14, Christoph Junghans <[email protected]> wrote: > >> >> Hi Javier, > > >> >> I remember having a similar problem with an older version of cmake. > >> >> Which version of cmake are you using? > >> >> ($cmake --version) > > >> >> Cheers, > > >> >> Christoph > > >> >> 2011/7/15 Javier Ramos <[email protected]>: > > >> >> > Dear developers and users, > > >> >> > I am trying to build the votca package following the instructions on > >> >> > the web page. However, I have some problems which I am not able to > >> >> > solve. > > >> >> > To do that I use the following script > > >> >> > >cat compiler.sh > > >> >> > source /home/nightrain/CODES/VOTCA/VOTCA_1.2/TMP/ > >> >> > gromacs-4.5.4_b/bin/GMXRC.bash > >> >> > prefix=`pwd` > >> >> > echo $prefix > >> >> > mkdir -p ${prefix}/src > >> >> > cd ${prefix}/src > >> >> > wgethttp://votca.googlecode.com/hg/build.sh > >> >> > chmod +x build.sh > >> >> > ./build.sh --prefix ${prefix} -j 1 --log build.log tools csg > > >> >> > The tools are compiled without problem but in the case of the csg > >> >> > package, after sometime, I get the following error: > > >> >> > =================================================== > >> >> > (...) > >> >> > Scanning dependencies of target csg_property > >> >> > [ 55%] Building CXX object src/tools/CMakeFiles/csg_property.dir/ > >> >> > csg_property.cc.o > >> >> > Linking CXX executable csg_property > >> >> > [ 55%] Built target csg_property > >> >> > Scanning dependencies of target csg_property_manpage > >> >> > [ 55%] Generating csg_property.man > >> >> > [ 57%] Built target csg_property_manpage > >> >> > Scanning dependencies of target csg_call > >> >> > Current revision is 400a0374775a > >> >> > [ 57%] Built target csg_call > >> >> > Scanning dependencies of target csg_call_manpage > >> >> > make[2]: *** No rule to make target `help2t2t',needed by `scripts/ > >> >> > help2t2t'. Stop. > >> >> > make[1]: *** [scripts/CMakeFiles/csg_call_manpage.dir/all] Error 2 > >> >> > make: *** [all] Error 2 > >> >> > =================================================== > > >> >> > Please, can someone help me to address this error? > > >> >> > Thanks in advance. Best regards > > >> >> > -------------------------------------------------------------- > >> >> > Dr. Javier Ramos > >> >> > Molecular Structure and Properties of Polymers > >> >> > Department of Macromolecular Physics > >> >> > Instituto de Estructura de la Materia (CSIC) > >> >> > C/ Serrano 113 bis 28006 Madrid (Spain) > >> >> > Voice +34 91 561 68 00 (943112) > >> >> > Fax +34 91 585 54 13 > >> >> >http://www.biophym.iem.csic.es/biophym > >> >> > -------------------------------------------------------------- > > >> >> > P.D. I paste here the content of the build.log file: > > >> >> > >cat build.log > > >> >> > Log of './build.sh --prefix /home/nightrain/CODES/VOTCA/VOTCA_1.2/ > >> >> > TMP4 -j 1 tools csg' > >> >> > This is VOTCA build.sh, version 1.6.1 > >> >> > prefix is '/home/nightrain/CODES/VOTCA/VOTCA_1.2/TMP4' > >> >> > Using 1 jobs for make > >> >> > Working on tools > >> >> > Doing checkout for tools fromhttps://tools.votca.googlecode.com/hg/ > >> >> > (CTRL-C to stop) 5 4 3 2 1 > >> >> > requesting all changes > >> >> > adding changesets > >> >> > adding manifests > >> >> > adding file changes > >> >> > added 474 changesets with 2604 changes to 1678 files (+2 heads) > >> >> > updating to branch default > >> >> > 1460 files updated, 0 files merged, 0 files removed, 0 files > >> >> > unresolved > >> >> > Switching to stable branch add --dev option to prevent that > >> >> > 7 files updated, 0 files merged, 0 files removed, 0 files unresolved > >> >> > cmake -DCMAKE_INSTALL_PREFIX=/home/nightrain/CODES/VOTCA/VOTCA_1.2/ > >> >> > TMP4 . > >> >> > -- The C compiler identification is GNU > >> >> > -- The CXX compiler identification is GNU > >> >> > -- Check for working C compiler: /usr/bin/gcc > >> >> > -- Check for working C compiler: /usr/bin/gcc -- works > >> >> > -- Detecting C compiler ABI info > >> >> > -- Detecting C compiler ABI info - done > >> >> > -- Check for working CXX compiler: /usr/bin/c++ > >> >> > -- Check for working CXX compiler: /usr/bin/c++ -- works > >> >> > -- Detecting CXX compiler ABI info > >> >> > -- Detecting CXX compiler ABI info - done > >> >> > -- Looking for include files CMAKE_HAVE_PTHREAD_H > >> >> > -- Looking for include files CMAKE_HAVE_PTHREAD_H - found > >> >> > -- Looking for pthread_create in pthreads > >> >> > -- Looking for pthread_create in pthreads - not found > >> >> > -- Looking for pthread_create in pthread > >> >> > -- Looking for pthread_create in pthread - found > >> >> > -- Found Threads: TRUE > >> >> > -- Found TXT2TAGS: /usr/bin/txt2tags > >> >> > -- Looking for assert.h > >> >> > -- Looking for assert.h - found > >> >> > -- Looking for math.h > >> >> > -- Looking for math.h - found > >> >> > -- Looking for stdio.h > >> >> > -- Looking for stdio.h - found-- Looking for C++ include cmath > >> >> > -- Looking for C++ include cmath - found > >> >> > -- Looking for C++ include fstream > >> >> > -- Looking for C++ include fstream - found > >> >> > -- Looking for C++ include functional > >> >> > -- Looking for C++ include functional - found > >> >> > -- Looking for C++ include iostream > >> >> > -- Looking for C++ include iostream - found > >> >> > -- Looking for C++ include limits > >> >> > -- Looking for C++ include limits - found > >> >> > -- Looking for C++ include list > >> >> > -- Looking for C++ include list - found > >> >> > -- Looking for C++ include map > >> >> > -- Looking for C++ include map - found > >> >> > -- Looking for C++ include ostream > >> >> > -- Looking for C++ include ostream - found > >> >> > -- Looking for C++ include sstream > >> >> > -- Looking for C++ include sstream - found > >> >> > -- Looking for C++ include stack > >> >> > -- Looking for C++ include stack - found > >> >> > -- Looking for C++ include stdexcept > >> >> > -- Looking for C++ include stdexcept - found > >> >> > -- Looking for C++ include string > >> >> > -- Looking for C++ include string - found > >> >> > -- Looking for C++ include vector > >> >> > -- Looking for C++ include vector - found > >> >> > -- Looking for sqrt in m > >> >> > -- Looking for sqrt in m - found > >> >> > -- Boost version: 1.40.0 > >> >> > -- Found the following Boost libraries: > >> >> > -- program_options > >> >> > -- Found EXPAT: /usr/lib/libexpat.so > >> >> > -- checking for module 'fftw3' > >> >> > -- found fftw3, version 3.2.2 > >> >> > -- Found FFTW3: /usr/lib/libfftw3.so > >> >> > -- Looking for fftw_plan_r2r_1d in /usr/lib/libfftw3.so > >> >> > -- Looking for fftw_plan_r2r_1d in /usr/lib/libfftw3.so - found > >> >> > -- Found CBLAS: /usr/lib/libcblas.so > >> >> > -- Looking for cblas_dsyrk in /usr/lib/libcblas.so > >> >> > -- Looking for cblas_dsyrk in /usr/lib/libcblas.so - found > >> >> > -- checking for module 'gsl' > >> >> > -- found gsl, version 1.13 > >> >> > -- Found GSL: /usr/lib/libgsl.so > >> >> > -- Looking for gsl_linalg_QR_decomp in /usr/lib/libgsl.so;/usr/lib/ > >> >> > libcblas.so > >> >> > -- Looking for gsl_linalg_QR_decomp in /usr/lib/libgsl.so;/usr/lib/ > >> >> > libcblas.so - found > >> >> > -- checking for module 'sqlite3' > >> >> > -- found sqlite3, version 3.6.22 > >> >> > -- Found SQLITE3: /usr/lib/libsqlite3.so > >> >> > -- Found Doxygen: /usr/bin/doxygen > >> >> > -- Configuring done > >> >> > -- Generating done > >> >> > -- Build files have been written to: /home/nightrain/CODES/VOTCA/ > >> >> > VOTCA_1.2/TMP4/src/tools > >> >> > buidling tools > >> >> > Scanning dependencies of target changelog > >> >> > [ 0%] Building CHANGELOG using txt2tags > >> >> > [ 3%] Built target changelog > >> >> > Scanning dependencies of target hgversion > >> >> > [ 3%] Built target hgversion > >> >> > Scanning dependencies of target manpages > >> >> > [ 3%] Building votca_tools manpage > >> >> > [ 7%] Built target manpages > >> >> > Scanning dependencies of target votca_tools > >> >> > [ 11%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> >> > linalg.cc.o > >> >> > [ 14%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> >> > matrix.cc.o > >> >> > [ 18%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> >> > histogramnew.cc.o > >> >> > [ 22%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> >> > spline.cc.o > >> >> > [ 25%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> >> > random.cc.o > >> >> > [ 29%] Building CXX object src/libtools/CMakeFiles/votca_tools.dir/ > >> >> > mutex.cc.o > >> >> > [ 33%] Building CXX object > > ... > > read more » -- You received this message because you are subscribed to the Google Groups "votca" group. 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