First thing I'd suggest in triaging your admin account is moving aside 
~/.bashrc, ~/.bash_profile, ~/.profile, and ~/.xinitrc if you have any of 
those.  Errors in those files are a frequent cause of trouble.

--Jeremy

> On Feb 12, 2015, at 01:56, Nash, Anthony <[email protected]> wrote:
> 
> Hi Jeremy,
> 
> You hit the nail on the head. Upon created a new user account the first thing 
> I did was to execute xclock from the terminal. It appeared. I then ssh -X 
> into the HPC and loaded the required software. It appeared. 
> 
> Now all I need to do is work out why XQuartz doesn't work on the Admin 
> account. But at least I can still get back to doing work now :)
> 
> Thanks
> Anthony
> 
> Dr Anthony Nash
> Department of Chemistry
> University College London
> ________________________________________
> From: Jeremy Huddleston Sequoia [[email protected]]
> Sent: 12 February 2015 06:46
> To: Nash, Anthony
> Cc: [email protected]
> Subject: Re: XQuartz on Yosemite
> 
> Try creating a new user account to see if it's maybe something in your 
> current user's configuration.
> 
>> On Feb 11, 2015, at 22:27, Nash, Anthony <[email protected]> wrote:
>> 
>> Hi all,
>> 
>> Just got up. Went through a complete uninstall of XQuartz, restarted the 
>> machine, tested everything to make sure it wasn't there. Nothing in top, 
>> nothing in the launcher, xclock gone, and $DISPLAY shows a blank line
>> 
>> I then went through a reinstall using the 2.7.7. dmg package. No problem. 
>> Restarted the machine as per installation instructions.
>> $Display 
>> -->/private/tmp/com.apple.launchd.9puGcCVaM8/org.macosforge.xquartz:0
>> 
>> in top:
>> 61859  Xquartz      0.0   00:00.00 2    0    23    808K   0B     0B     
>> 61859 61854
>> 
>> Visible in the Launchpad as X11 (but it does not when I click on it)
>> 
>> However, when I type xclock in the command line I see its process:
>> 61828  xclock       0.0   00:00.00 1    0    9     588K   0B     0B     
>> 61828 61749
>> 
>> But I do not see a xclock GUI (as I have seen on websites). Surely before 
>> even trying to communicate with remote applications I need to ensure XQuartz 
>> is configured correctly on myside.
>> 
>> Thanks
>> Anthony
>> 
>> Dr Anthony Nash
>> Department of Chemistry
>> University College London
>> ________________________________________
>> From: Michael P. Soulier [[email protected]]
>> Sent: 11 February 2015 23:07
>> To: Nash, Anthony
>> Cc: [email protected]
>> Subject: Re: XQuartz on Yosemite
>> 
>> I’m using ssh -X.
>> 
>> Mike
>> 
>>> On Feb 11, 2015, at 4:26 PM, Nash, Anthony <[email protected]> wrote:
>>> 
>>> Hi Michael,
>>> 
>>> What are the exact commands you are using? I'm not overly experienced with 
>>> XQuartz. I was fortunate enough to be running Mac Snow Leopard for 4 years 
>>> without a single need to do anything but type "ssh -X ...."
>>> 
>>> Thanks
>>> Anthony
>>> 
>>> 
>>> Dr Anthony Nash
>>> Department of Chemistry
>>> University College London
>>> ________________________________________
>>> From: Michael P. Soulier [[email protected]]
>>> Sent: 11 February 2015 21:22
>>> To: Nash, Anthony
>>> Cc: John Francini; [email protected]
>>> Subject: Re: XQuartz on Yosemite
>>> 
>>> Personally, I get an xauth not found error, and I must run xauth manually.
>>> 
>>> Mike
>>> 
>>>> On Feb 11, 2015, at 3:53 PM, Nash, Anthony <[email protected]> wrote:
>>>> 
>>>> Hi John,
>>>> 
>>>> I've tried both with no success.
>>>> 
>>>> Thanks
>>>> Anthony
>>>> 
>>>> Dr Anthony Nash
>>>> Department of Chemistry
>>>> University College London
>>>> ________________________________________
>>>> From: John Francini [[email protected]]
>>>> Sent: 11 February 2015 20:47
>>>> To: Nash, Anthony
>>>> Cc: [email protected]
>>>> Subject: Re: XQuartz on Yosemite
>>>> 
>>>> After you do the install it’s necessary to log out and log back in (or 
>>>> restart) before trying to run X.
>>>> 
>>>> John, who uses X11 apps just fine on my Yosemite system
>>>> 
>>>> 
>>>> 
>>>>> On 11 Feb 2015, at 15:29, Nash, Anthony <[email protected]> wrote:
>>>>> 
>>>>> 
>>>>> Hi all,
>>>>> 
>>>>> I understand there are many guides on XQuartz for Yosemite, of which I 
>>>>> have gone through many of them. But unfortunately my problem persists. It 
>>>>> all began after purchasing a brand new Mac inc. Yosemite. I do a lot of 
>>>>> ssh X11Forwarding work from home, and now going from Snow Leppard all of 
>>>>> a sudden I've got a bit of a stop-ship issue. ssh -X was throwing up the 
>>>>> warning:
>>>>> 
>>>>> /opt/X11/bin/xauth:  file /Users/acnash/.Xauthority does not exist
>>>>> 
>>>>> So now I can't load remote applications from a HPC. I try loading X from 
>>>>> the terminal and I get a dialog window saying to go and install XQuartz. 
>>>>> So I do this. After this I check all of the usual directories and I note 
>>>>> that there are symbolic links to XQuartz. Wonderful.
>>>>> 
>>>>> But then I continue getting the same error when using ssh -X (and -Y).
>>>>> 
>>>>> So now I simply try launching Xclock from my local terminal (my mac). 
>>>>> Nothing happens. Xclock appears to be running (the command line does not 
>>>>> return and top indicates the presence of the xclock process) but I get NO 
>>>>> gui. In fact, looking at top I can see the XQuartz process sitting there 
>>>>> too.
>>>>> 
>>>>> The $DISPLAY is:
>>>>> /private/tmp/com.apple.launchd.idm2Xw6J8h/org.macosforge.xquartz:0
>>>>> 
>>>>> I would really appreciate some help here. I'm a mathematical chemist not 
>>>>> an IT guy, and this is causing some really issues with my work. I know 
>>>>> that things should fall into place the moment I can get xclock visualised 
>>>>> on my side.
>>>>> 
>>>>> Thanks
>>>>> Anthony
>>>>> 
>>>>> 
>>>>> Dr Anthony Nash
>>>>> Department of Chemistry
>>>>> University College London
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>>>> 
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