[Jmol-users] cloning part of a model into another frame

2017-06-09 Thread Angel Herráez
Dear Bob, Is there a way to extract some residue fron the loaded model and clone or duplicate it in a new frame/model? I am trying ff1 = load('=pdbe/1foz') load "@ff1" But I don't know how / if I can extract a subset of atoms from that ff1 variable (and e.g. create a new model using load

Re: [Jmol-users] Java will go from Safari as well as already gone from Opera, FF and Chrome

2017-06-09 Thread Rolf Huehne
Am 09.06.17 um 15:21 schrieb Robert Hanson: I think we're one level off here. You can always run Jmol.jar if you want Jmol's desktop application, and nothing is going to change about that. It isn't an applet, so there is no browser issue. I don't think that Jmol's current desktop application

Re: [Jmol-users] Java will go from Safari as well as already gone from Opera, FF and Chrome

2017-06-09 Thread Rolf Huehne
Am 09.06.17 um 15:21 schrieb Robert Hanson: Yes. By "felt" you mean that the browser will manage its threads relating to tabs and other dyanamic content (e.g. ads), and it may shift a running JavaScript app to a lower priority more likely than a running Java application would or, in particular,

Re: [Jmol-users] Important Account Information - Reconfirm Mailing List Subscriptions

2017-06-09 Thread Angel Herráez
Yes, the email looks ugly indeed. Rather than following the link, I signed in into sf.net, went to user area and there was a button to renew subscriptions. So it looks perfectly authentic. --- El software de antivirus Avast ha analizado este correo electrónico en busca de virus.

Re: [Jmol-users] Java will go from Safari as well as already gone from Opera, FF and Chrome

2017-06-09 Thread Robert Hanson
I don't know anything about JavaFX, but it's not clear to me there has >> been any development on it since 2012 or 2014. Maybe just an idea that >> never took off? Do you see some advantage to this? >> >> Since I don't have done any Java programming I will know even less. When > I spoke to a

Re: [Jmol-users] Java will go from Safari as well as already gone from Opera, FF and Chrome

2017-06-09 Thread Rolf Huehne
Am 08.06.17 um 19:44 schrieb Robert Hanson: On Thu, Jun 8, 2017 at 10:58 AM, Rolf Huehne > wrote: Am 08.06.17 um 14:41 schrieb Robert Hanson: RIP, Java applets. Since there still are many situations where the

[Jmol-users] Important Account Information - Reconfirm Mailing List Subscriptions

2017-06-09 Thread Rzepa, Henry S
This email (automatically filtered into my junk, where I spotted it by accident) asks me to confirm my jmol list memberships. It gives a pretty good impression of a phishing junk email, but the link contained does look genuine. I presume everyone else on the jmol lists have received this?

Re: [Jmol-users] Important Account Information - Reconfirm Mailing List Subscriptions

2017-06-09 Thread Phillip Barak
Saw it this morning, sniffed it suspiciously, searched for it unsuccessfully on sourceforge itself, and then proceeded cautiously. Leads to sourceforge website, filling in subscription information but not asking for any add'l information, and then just a click to 'confirm'. Who knows why they

[Jmol-users] display of contacts in two frames/models

2017-06-09 Thread Angel Herráez
It seems that the result of "contact" cannot be present separately in the two frames when 2 models have been loaded. Only the latest generated set of contacts is displayed, and only in the current frame (even if calculated from atoms in the other frame). Is there a way around? We would like