[Jmol-users] Jmol permissions problem

2012-06-18 Thread Martin Hediger
Dear Jmol Developers I'm having a very unusual problem here. I'm retyping the error message from the Jmol console, because it can not be copied from there: File Error:java.security.AccessControlException: access denied (java.net.SocketPermission 123.225.101.52:80 connect,resolve) This did not

Re: [Jmol-users] Jmol permissions problem

2012-06-18 Thread Angel Herráez
Hi Martin Yes, I know the feeling. It has happened to me occasionally. 1. Make sure you clear up the Java cache. Maybe try another browser to be sure it is not contaminated bu cached copies. 2. Check the paths of the files involved. Sister folders for example are a cause of security

Re: [Jmol-users] Jmol permissions problem

2012-06-18 Thread Jaime Prilusky
Double check to ensure that you use the same URL on all pages. Changes like additional 'www' will induce Java to think that you're accessing another server and this is against the security rules. Jaim On Jun 18, 2012, at 3:30 PM, Martin Hediger wrote: Dear Jmol Developers I'm having a very

Re: [Jmol-users] Jmol permissions problem

2012-06-18 Thread Martin Hediger
@ Jaim and Angel Thanks for your feedback. It's exactly what I'm going through right now and its funny because the exact same application worked fine a couple of hours ago, when it was just in another location on the server. What fails is the loading of the structure from a Javascript call.

Re: [Jmol-users] Jmol permissions problem

2012-06-18 Thread Martin Hediger
Just an update. It turns out, I was doing the load using jmolScriptWait(...). Using jmolScript(...), it seems to have no problem with permissions. On 18.06.12 15:15, Jaime Prilusky wrote: Double check to ensure that you use the same URL on all pages. Changes like additional 'www' will

Re: [Jmol-users] Jmol permissions problem

2012-06-18 Thread Jaime Prilusky
I see no errors on Mac 10.6.8, FireFox 12.0 It draws a structure nicely, I'm able to change pH, redraw and plot the pH Response and BioFET-SIM graphs. No errors on the applet console nor on Java console. While testing from Safari 5.1.7 I got a python error, probably due to changes at the server

Re: [Jmol-users] Jmol permissions problem

2012-06-18 Thread Rolf Huehne
On 06/18/2012 03:29 PM, Martin Hediger wrote: @ Jaim and Angel Thanks for your feedback. It's exactly what I'm going through right now and its funny because the exact same application worked fine a couple of hours ago, when it was just in another location on the server. What fails is the

Re: [Jmol-users] Jmol permissions problem

2012-06-18 Thread Angel Herráez
It turns out, I was doing the load using jmolScriptWait(...). Using jmolScript(...), it seems to have no problem with permissions. Ah! That clicks a memory This is called use of threads. I have fixed security errors by setting useCommandThread Look for that word in the online scripting doc

Re: [Jmol-users] Jmol permissions problem

2012-06-18 Thread Martin Hediger
Hi guys Thanks for your feedback. Yes, at the moment I think I just got it up and running. I did not rearrange any script locations, so all Javascript/JQuery scripts are still located in a sister directory of the Jmol directory. I cant really tell what the problem was/is. I'm doing all this

Re: [Jmol-users] Jmol permissions problem

2012-06-18 Thread Martin Hediger
Ok, didn't know about it. Set the callback and using jmolScriptWait now. Looking fine, thanks again. Martin On 18.06.12 16:00, Angel Herráez wrote: It turns out, I was doing the load using jmolScriptWait(...). Using jmolScript(...), it seems to have no problem with permissions. Ah! That