Hi, I think that you forgot to import reporter (probeset) information before running the plug-in, i.e., there is a probeset in the .cel files that does not exist in the reporter table.
Jari Cris wrote: > Hi all, > > I am trying to run the RMAExpress plug-in to import Affymetrix data, but > I get the following error: > > net.sf.basedb.core.BaseException: Unable to import root bioassay. > at se.lu.thep.affymetrix.RMAExpress.storeResult (RMAExpress.java:424) > at se.lu.thep.affymetrix.RMAExpress.run(RMAExpress.java:307) > at > net.sf.basedb.core.PluginExecutionRequest.invoke(PluginExecutionRequest.java:88) > at net.sf.basedb.core.InternalJobQueue$JobRunner.run > (InternalJobQueue.java:420) > at java.lang.Thread.run(Thread.java:595) > > I successfully installed and run the RMAExpressConsole, so I have no > clue of where is the problem. > > I'm running BASE in a Linux FC6 with MySQL. > > Thanks a lot for any help. > > > -- > Cristiane Rocha > Laboratorio de Genetica Molecular > Faculdade de Ciencias Medicas - Unicamp > Brasil - 55 - 19- 3521-8956 > ------------------------------------------------------------------------- Take Surveys. Earn Cash. Influence the Future of IT Join SourceForge.net's Techsay panel and you'll get the chance to share your opinions on IT & business topics through brief surveys-and earn cash http://www.techsay.com/default.php?page=join.php&p=sourceforge&CID=DEVDEV _______________________________________________ The BASE general discussion mailing list basedb-users@lists.sourceforge.net unsubscribe: send a mail with subject "unsubscribe" to [EMAIL PROTECTED]
